RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 A6NJR5 290 aa14.88□□□□□ -0.03
SMG9-207ENST00000598860 FMNL1O95466 1100 aaPredicted RBP14.88□□□□□ -0.03
SMG9-207ENST00000598860 KCNA6P17658 529 aa14.88□□□□□ -0.03
SMG9-207ENST00000598860 ZNF326Q5BKZ1 582 aaKnown RBP14.88□□□□□ -0.03
SMG9-207ENST00000598860 IFT172Q9UG01 1749 aa14.88□□□□□ -0.03
SMG9-207ENST00000598860 PLEKHG1Q9ULL1 1385 aa14.87□□□□□ -0.03
SMG9-207ENST00000598860 BRICD5Q6PL45 260 aa14.87□□□□□ -0.03
SMG9-207ENST00000598860 SYMPKQ92797 1274 aaKnown RBP14.87□□□□□ -0.03
SMG9-207ENST00000598860 THAP11Q96EK4 314 aa14.87□□□□□ -0.03
SMG9-207ENST00000598860 C1orf115Q9H7X2 142 aa14.87□□□□□ -0.03
SMG9-207ENST00000598860 STRCP1A6NGW2 1772 aa14.87□□□□□ -0.03
SMG9-207ENST00000598860 PPLO60437 1756 aa14.86□□□□□ -0.03
SMG9-207ENST00000598860 SPSB2Q99619 263 aa14.86□□□□□ -0.03
SMG9-207ENST00000598860 SALL2Q9Y467 1007 aaPredicted RBP14.86□□□□□ -0.03
SMG9-207ENST00000598860 LRRC7Q96NW7 1537 aa14.86□□□□□ -0.03
SMG9-207ENST00000598860 C6orf229H3BNL8 230 aa14.85□□□□□ -0.03
SMG9-207ENST00000598860 ZEB1P37275 1124 aaPredicted RBP14.85□□□□□ -0.03
SMG9-207ENST00000598860 RFC5P40937 340 aa14.85□□□□□ -0.03
SMG9-207ENST00000598860 TBX22Q9Y458 520 aa14.85□□□□□ -0.03
SMG9-207ENST00000598860 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
SMG9-207ENST00000598860 SPATA31E1Q6ZUB1 1445 aa14.84□□□□□ -0.03
SMG9-207ENST00000598860 ADH1BP00325 375 aa14.84□□□□□ -0.03
SMG9-207ENST00000598860 PIP4K2BP78356 416 aa14.84□□□□□ -0.03
SMG9-207ENST00000598860 PROSER2Q86WR7 435 aaPredicted RBP14.84□□□□□ -0.03
SMG9-207ENST00000598860 SIN3AQ96ST3 1273 aa14.84□□□□□ -0.03
SMG9-207ENST00000598860 TUSC1Q2TAM9 212 aa14.83□□□□□ -0.04
SMG9-207ENST00000598860 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
SMG9-207ENST00000598860 MTMR2Q13614 643 aa14.82□□□□□ -0.04
SMG9-207ENST00000598860 PPP2R2DQ66LE6 453 aa14.82□□□□□ -0.04
SMG9-207ENST00000598860 SPDYE5A6NIY4 337 aa14.81□□□□□ -0.04
SMG9-207ENST00000598860 IFFO2Q5TF58 517 aa14.81□□□□□ -0.04
SMG9-207ENST00000598860 CABLES1Q8TDN4 633 aa14.81□□□□□ -0.04
SMG9-207ENST00000598860 APBB1O00213 710 aa14.8□□□□□ -0.04
SMG9-207ENST00000598860 TRAK2O60296 914 aa14.8□□□□□ -0.04
SMG9-207ENST00000598860 QPCTQ16769 361 aa14.8□□□□□ -0.04
SMG9-207ENST00000598860 BANK1Q8NDB2 785 aa14.8□□□□□ -0.04
SMG9-207ENST00000598860 USB1Q9BQ65 265 aaKnown RBP14.8□□□□□ -0.04
SMG9-207ENST00000598860 ZBTB3Q9H5J0 574 aa14.8□□□□□ -0.04
SMG9-207ENST00000598860 TMEM94Q12767 1356 aa14.79□□□□□ -0.04
SMG9-207ENST00000598860 NEXMIFQ5QGS0 1516 aa14.79□□□□□ -0.04
SMG9-207ENST00000598860 PRPF38BQ5VTL8 546 aaKnown RBP14.79□□□□□ -0.04
SMG9-207ENST00000598860 RPGRIP1LQ68CZ1 1315 aa14.79□□□□□ -0.04
SMG9-207ENST00000598860 ADAMTS13Q76LX8 1427 aa14.79□□□□□ -0.04
SMG9-207ENST00000598860 MYOM2P54296 1465 aa14.78□□□□□ -0.04
SMG9-207ENST00000598860 NUTM2BA6NNL0 878 aaPredicted RBP14.78□□□□□ -0.04
SMG9-207ENST00000598860 NUTM2EB1AL46 878 aaPredicted RBP14.78□□□□□ -0.04
SMG9-207ENST00000598860 LILRB3O75022 631 aa14.78□□□□□ -0.04
SMG9-207ENST00000598860 RETREG3Q86VR2 466 aa14.78□□□□□ -0.04
SMG9-207ENST00000598860 NUTM2AQ8IVF1 878 aaPredicted RBP14.78□□□□□ -0.04
SMG9-207ENST00000598860 FAM160A2Q8N612 972 aaPredicted RBP14.78□□□□□ -0.04
SMG9-207ENST00000598860 PIK3R4Q99570 1358 aa14.77□□□□□ -0.04
SMG9-207ENST00000598860 TMEM259Q4ZIN3 620 aa14.77□□□□□ -0.05
SMG9-207ENST00000598860 POM121Q96HA1 1249 aa14.77□□□□□ -0.05
SMG9-207ENST00000598860 ARID3AQ99856 593 aa14.77□□□□□ -0.05
SMG9-207ENST00000598860 SLC6A16Q9GZN6 736 aa14.77□□□□□ -0.05
SMG9-207ENST00000598860 CHD2O14647 1828 aaKnown RBP14.77□□□□□ -0.05
SMG9-207ENST00000598860 KIAA1210Q9ULL0 1709 aa14.76□□□□□ -0.05
SMG9-207ENST00000598860 SNRKQ9NRH2 765 aa14.76□□□□□ -0.05
SMG9-207ENST00000598860 DIP2AQ14689 1571 aa14.76□□□□□ -0.05
SMG9-207ENST00000598860 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
SMG9-207ENST00000598860 LAMC1P11047 1609 aa14.75□□□□□ -0.05
SMG9-207ENST00000598860 RAD21O60216 631 aa14.75□□□□□ -0.05
SMG9-207ENST00000598860 S1PR4O95977 384 aa14.75□□□□□ -0.05
SMG9-207ENST00000598860 HSPA1LP34931 641 aa14.75□□□□□ -0.05
SMG9-207ENST00000598860 MSS51Q4VC12 460 aa14.75□□□□□ -0.05
SMG9-207ENST00000598860 PRDM9Q9NQV7 894 aa14.75□□□□□ -0.05
SMG9-207ENST00000598860 AMOTL2Q9Y2J4 779 aa14.75□□□□□ -0.05
SMG9-207ENST00000598860 XIRP1Q702N8 1843 aaKnown RBP14.75□□□□□ -0.05
SMG9-207ENST00000598860 NWD1Q149M9 1564 aa14.74□□□□□ -0.05
SMG9-207ENST00000598860 RGL3Q3MIN7 710 aa14.74□□□□□ -0.05
SMG9-207ENST00000598860 RTL5Q5HYW3 569 aaPredicted RBP14.74□□□□□ -0.05
SMG9-207ENST00000598860 L3MBTL2Q969R5 705 aa14.74□□□□□ -0.05
SMG9-207ENST00000598860 PRR7Q8TB68 274 aa14.73□□□□□ -0.05
SMG9-207ENST00000598860 MSH6P52701 1360 aa14.73□□□□□ -0.05
SMG9-207ENST00000598860 PPP1R18Q6NYC8 613 aa14.72□□□□□ -0.05
SMG9-207ENST00000598860 ALKQ9UM73 1620 aa14.72□□□□□ -0.05
SMG9-207ENST00000598860 SETBP1Q9Y6X0 1596 aa14.72□□□□□ -0.05
SMG9-207ENST00000598860 NRXN1Q9ULB1 1477 aa14.71□□□□□ -0.05
SMG9-207ENST00000598860 TRPM1Q7Z4N2 1603 aa14.71□□□□□ -0.05
SMG9-207ENST00000598860 COG6Q9Y2V7 657 aa14.71□□□□□ -0.05
SMG9-207ENST00000598860 PTPRUQ92729 1446 aa14.7□□□□□ -0.06
SMG9-207ENST00000598860 NCOA3Q9Y6Q9 1424 aa14.7□□□□□ -0.06
SMG9-207ENST00000598860 CFAP99D6REC4 459 aa14.7□□□□□ -0.06
SMG9-207ENST00000598860 FNBP4Q8N3X1 1017 aaPredicted RBP14.7□□□□□ -0.06
SMG9-207ENST00000598860 DCAF11Q8TEB1 546 aa14.7□□□□□ -0.06
SMG9-207ENST00000598860 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.7□□□□□ -0.06
SMG9-207ENST00000598860 METP08581 1390 aa14.7□□□□□ -0.06
SMG9-207ENST00000598860 PRAG1Q86YV5 1406 aa14.69□□□□□ -0.06
SMG9-207ENST00000598860 A0A0G2JS52 829 aa14.69□□□□□ -0.06
SMG9-207ENST00000598860 GGCXP38435 758 aa14.69□□□□□ -0.06
SMG9-207ENST00000598860 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
SMG9-207ENST00000598860 SLAIN2Q9P270 581 aa14.69□□□□□ -0.06
SMG9-207ENST00000598860 NRXN3Q9Y4C0 1643 aa14.69□□□□□ -0.06
SMG9-207ENST00000598860 PPEF1O14829 653 aaPredicted RBP14.68□□□□□ -0.06
SMG9-207ENST00000598860 TSC1Q92574 1164 aa14.68□□□□□ -0.06
SMG9-207ENST00000598860 PIK3C2GO75747 1445 aa14.67□□□□□ -0.06
SMG9-207ENST00000598860 JUNDP17535 347 aa14.67□□□□□ -0.06
SMG9-207ENST00000598860 ATF3P18847 181 aa14.67□□□□□ -0.06
SMG9-207ENST00000598860 MTMR14Q8NCE2 650 aa14.67□□□□□ -0.06
SMG9-207ENST00000598860 RALGAPBQ86X10 1494 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms