RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 FLAD1Q8NFF5 587 aa26.73■■□□□ 1.87
ARHGEF1-217ENST00000598812 C4BP0C0L5 1744 aa26.73■■□□□ 1.87
ARHGEF1-217ENST00000598812 MAP3K5Q99683 1374 aa26.72■■□□□ 1.87
ARHGEF1-217ENST00000598812 ATG3Q9NT62 314 aa26.72■■□□□ 1.87
ARHGEF1-217ENST00000598812 KDM6AO15550 1401 aaPredicted RBP26.72■■□□□ 1.87
ARHGEF1-217ENST00000598812 CABP4P57796 275 aa26.71■■□□□ 1.87
ARHGEF1-217ENST00000598812 IFFO2Q5TF58 517 aa26.71■■□□□ 1.87
ARHGEF1-217ENST00000598812 HMOX1P09601 288 aa26.7■■□□□ 1.86
ARHGEF1-217ENST00000598812 ATP6V1AP38606 617 aa26.7■■□□□ 1.86
ARHGEF1-217ENST00000598812 COL24A1Q17RW2 1714 aa26.69■■□□□ 1.86
ARHGEF1-217ENST00000598812 LINC00116Q8NCU8 138 aa26.68■■□□□ 1.86
ARHGEF1-217ENST00000598812 KLHL34Q8N239 644 aa26.67■■□□□ 1.86
ARHGEF1-217ENST00000598812 ITPK1Q13572 414 aa26.66■■□□□ 1.86
ARHGEF1-217ENST00000598812 PHF14O94880 888 aa26.65■■□□□ 1.86
ARHGEF1-217ENST00000598812 AKAP4Q5JQC9 854 aa26.65■■□□□ 1.86
ARHGEF1-217ENST00000598812 MSL1Q68DK7 614 aa26.65■■□□□ 1.86
ARHGEF1-217ENST00000598812 RBM42Q9BTD8 480 aaKnown RBP26.65■■□□□ 1.86
ARHGEF1-217ENST00000598812 UBR3Q6ZT12 1888 aa26.64■■□□□ 1.85
ARHGEF1-217ENST00000598812 COL3A1P02461 1466 aaPredicted RBP26.63■■□□□ 1.85
ARHGEF1-217ENST00000598812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.63■■□□□ 1.85
ARHGEF1-217ENST00000598812 U2SURPO15042 1029 aaKnown RBP26.63■■□□□ 1.85
ARHGEF1-217ENST00000598812 SSFA2P28290 1259 aa26.63■■□□□ 1.85
ARHGEF1-217ENST00000598812 NFATC2IPQ8NCF5 419 aa26.63■■□□□ 1.85
ARHGEF1-217ENST00000598812 GNPATO15228 680 aa26.62■■□□□ 1.85
ARHGEF1-217ENST00000598812 AMIGO3Q86WK7 504 aa26.61■■□□□ 1.85
ARHGEF1-217ENST00000598812 CFAP53Q96M91 514 aa26.61■■□□□ 1.85
ARHGEF1-217ENST00000598812 SCN11AQ9UI33 1791 aa26.61■■□□□ 1.85
ARHGEF1-217ENST00000598812 SMIM5Q71RC9 77 aa26.59■■□□□ 1.85
ARHGEF1-217ENST00000598812 SLC4A9Q96Q91 983 aa26.59■■□□□ 1.85
ARHGEF1-217ENST00000598812 ZNF831Q5JPB2 1677 aa26.59■■□□□ 1.85
ARHGEF1-217ENST00000598812 PTCD1O75127 700 aaKnown RBP26.58■■□□□ 1.85
ARHGEF1-217ENST00000598812 MTHFSDQ2M296 383 aaKnown RBP26.58■■□□□ 1.85
ARHGEF1-217ENST00000598812 SLC52A2Q9HAB3 445 aa26.56■■□□□ 1.84
ARHGEF1-217ENST00000598812 LGR6Q9HBX8 967 aa26.56■■□□□ 1.84
ARHGEF1-217ENST00000598812 RNMTO43148 476 aaKnown RBP26.55■■□□□ 1.84
ARHGEF1-217ENST00000598812 GIGYF1O75420 1035 aaPredicted RBP26.55■■□□□ 1.84
ARHGEF1-217ENST00000598812 RTCBQ9Y3I0 505 aaKnown RBP26.55■■□□□ 1.84
ARHGEF1-217ENST00000598812 PPP2R1AP30153 589 aa26.54■■□□□ 1.84
ARHGEF1-217ENST00000598812 RC3H1Q5TC82 1133 aaKnown RBP26.54■■□□□ 1.84
ARHGEF1-217ENST00000598812 NUDCQ9Y266 331 aa26.53■■□□□ 1.84
ARHGEF1-217ENST00000598812 CNTNAP4Q9C0A0 1308 aa26.53■■□□□ 1.84
ARHGEF1-217ENST00000598812 COL5A3P25940 1745 aaPredicted RBP26.53■■□□□ 1.84
ARHGEF1-217ENST00000598812 MRC1P22897 1456 aa26.52■■□□□ 1.84
ARHGEF1-217ENST00000598812 GPR162Q16538 588 aa26.52■■□□□ 1.84
ARHGEF1-217ENST00000598812 TRAPPC3LQ5T215 181 aa26.52■■□□□ 1.84
ARHGEF1-217ENST00000598812 CEP350Q5VT06 3117 aa26.52■■□□□ 1.84
ARHGEF1-217ENST00000598812 NLGN2Q8NFZ4 835 aa26.52■■□□□ 1.84
ARHGEF1-217ENST00000598812 GAS2L2Q8NHY3 880 aa26.51■■□□□ 1.83
ARHGEF1-217ENST00000598812 VIRMAQ69YN4 1812 aaKnown RBP26.51■■□□□ 1.83
ARHGEF1-217ENST00000598812 PELP1Q8IZL8 1130 aaKnown RBP26.5■■□□□ 1.83
ARHGEF1-217ENST00000598812 GOLGB1Q14789 3259 aaKnown RBP26.5■■□□□ 1.83
ARHGEF1-217ENST00000598812 ADRA2BP18089 450 aa26.49■■□□□ 1.83
ARHGEF1-217ENST00000598812 ADAMTS7Q9UKP4 1686 aa26.48■■□□□ 1.83
ARHGEF1-217ENST00000598812 RPS6KA4O75676 772 aa26.48■■□□□ 1.83
ARHGEF1-217ENST00000598812 CD2APQ9Y5K6 639 aa26.48■■□□□ 1.83
ARHGEF1-217ENST00000598812 PRKAR2BP31323 418 aa26.47■■□□□ 1.83
ARHGEF1-217ENST00000598812 GNAT3A8MTJ3 354 aa26.46■■□□□ 1.83
ARHGEF1-217ENST00000598812 U2AF1L5P0DN76 240 aaPredicted RBP26.46■■□□□ 1.83
ARHGEF1-217ENST00000598812 CRKLP46109 303 aaKnown RBP26.46■■□□□ 1.83
ARHGEF1-217ENST00000598812 U2AF1Q01081 240 aaKnown RBP eCLIP26.46■■□□□ 1.83
ARHGEF1-217ENST00000598812 SLC39A6Q13433 755 aa26.46■■□□□ 1.83
ARHGEF1-217ENST00000598812 MYH14Q7Z406 1995 aaKnown RBP26.46■■□□□ 1.83
ARHGEF1-217ENST00000598812 TJP1Q07157 1748 aa26.45■■□□□ 1.83
ARHGEF1-217ENST00000598812 RFC4P35249 363 aa26.45■■□□□ 1.82
ARHGEF1-217ENST00000598812 ARHGEF1Q92888 912 aaKnown RBP26.45■■□□□ 1.82
ARHGEF1-217ENST00000598812 RSPH6AQ9H0K4 717 aa26.45■■□□□ 1.82
ARHGEF1-217ENST00000598812 CICQ96RK0 1608 aaPredicted RBP26.45■■□□□ 1.82
ARHGEF1-217ENST00000598812 TEFQ10587 303 aa26.43■■□□□ 1.82
ARHGEF1-217ENST00000598812 NLGN1Q8N2Q7 840 aa26.43■■□□□ 1.82
ARHGEF1-217ENST00000598812 MMP10P09238 476 aa26.42■■□□□ 1.82
ARHGEF1-217ENST00000598812 DNAJC10Q8IXB1 793 aa26.42■■□□□ 1.82
ARHGEF1-217ENST00000598812 PHACTR3Q96KR7 559 aa26.42■■□□□ 1.82
ARHGEF1-217ENST00000598812 TTC5Q8N0Z6 440 aa26.41■■□□□ 1.82
ARHGEF1-217ENST00000598812 KCPQ6ZWJ8 1503 aa26.4■■□□□ 1.82
ARHGEF1-217ENST00000598812 FCHSD2O94868 740 aa26.4■■□□□ 1.82
ARHGEF1-217ENST00000598812 IL17REQ8NFR9 667 aa26.4■■□□□ 1.82
ARHGEF1-217ENST00000598812 CCDC87Q9NVE4 849 aa26.39■■□□□ 1.82
ARHGEF1-217ENST00000598812 C4AP0C0L4 1744 aa26.39■■□□□ 1.81
ARHGEF1-217ENST00000598812 GYS1P13807 737 aa26.38■■□□□ 1.81
ARHGEF1-217ENST00000598812 INTS5Q6P9B9 1019 aaKnown RBP26.38■■□□□ 1.81
ARHGEF1-217ENST00000598812 VSIG10Q8N0Z9 540 aa26.38■■□□□ 1.81
ARHGEF1-217ENST00000598812 GRIN3BO60391 1043 aa26.37■■□□□ 1.81
ARHGEF1-217ENST00000598812 CYP19A1P11511 503 aaPredicted RBP26.36■■□□□ 1.81
ARHGEF1-217ENST00000598812 YBX3P16989 372 aaKnown RBP eCLIP26.36■■□□□ 1.81
ARHGEF1-217ENST00000598812 UBR2Q8IWV8 1755 aa26.35■■□□□ 1.81
ARHGEF1-217ENST00000598812 CEMIPQ8WUJ3 1361 aa26.34■■□□□ 1.81
ARHGEF1-217ENST00000598812 ATP10DQ9P241 1426 aa26.34■■□□□ 1.81
ARHGEF1-217ENST00000598812 ZNF790Q6PG37 636 aa26.34■■□□□ 1.81
ARHGEF1-217ENST00000598812 RTF1Q92541 710 aaKnown RBP26.34■■□□□ 1.81
ARHGEF1-217ENST00000598812 SRP68Q9UHB9 627 aaKnown RBP26.34■■□□□ 1.81
ARHGEF1-217ENST00000598812 USP42Q9H9J4 1324 aaKnown RBP26.34■■□□□ 1.81
ARHGEF1-217ENST00000598812 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.81
ARHGEF1-217ENST00000598812 PARP3Q9Y6F1 533 aa26.33■■□□□ 1.81
ARHGEF1-217ENST00000598812 NEFMP07197 916 aa26.32■■□□□ 1.8
ARHGEF1-217ENST00000598812 SOS1Q07889 1333 aaPredicted RBP26.32■■□□□ 1.8
ARHGEF1-217ENST00000598812 ZPR1O75312 459 aa26.31■■□□□ 1.8
ARHGEF1-217ENST00000598812 STARD3NLO95772 234 aa26.31■■□□□ 1.8
ARHGEF1-217ENST00000598812 ZNF496Q96IT1 587 aaPredicted RBP26.31■■□□□ 1.8
ARHGEF1-217ENST00000598812 BTBD11A6QL63 1104 aa26.3■■□□□ 1.8
ARHGEF1-217ENST00000598812 DDX10Q13206 875 aaKnown RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms