RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 SIK1P57059 783 aa16.47■□□□□ 0.23
PDE4C-213ENST00000598111 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
PDE4C-213ENST00000598111 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
PDE4C-213ENST00000598111 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
PDE4C-213ENST00000598111 MAP3K5Q99683 1374 aa16.47■□□□□ 0.23
PDE4C-213ENST00000598111 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
PDE4C-213ENST00000598111 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
PDE4C-213ENST00000598111 AK7Q96M32 723 aa16.45■□□□□ 0.22
PDE4C-213ENST00000598111 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
PDE4C-213ENST00000598111 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
PDE4C-213ENST00000598111 SIPA1L3O60292 1781 aaPredicted RBP16.45■□□□□ 0.22
PDE4C-213ENST00000598111 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
PDE4C-213ENST00000598111 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
PDE4C-213ENST00000598111 RNMTO43148 476 aaKnown RBP16.44■□□□□ 0.22
PDE4C-213ENST00000598111 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
PDE4C-213ENST00000598111 TJP1Q07157 1748 aa16.44■□□□□ 0.22
PDE4C-213ENST00000598111 COL24A1Q17RW2 1714 aa16.43■□□□□ 0.22
PDE4C-213ENST00000598111 NEFMP07197 916 aa16.43■□□□□ 0.22
PDE4C-213ENST00000598111 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
PDE4C-213ENST00000598111 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
PDE4C-213ENST00000598111 SLC52A2Q9HAB3 445 aa16.43■□□□□ 0.22
PDE4C-213ENST00000598111 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
PDE4C-213ENST00000598111 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
PDE4C-213ENST00000598111 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
PDE4C-213ENST00000598111 MSH5O43196 834 aa16.42■□□□□ 0.22
PDE4C-213ENST00000598111 FCHSD2O94868 740 aa16.42■□□□□ 0.22
PDE4C-213ENST00000598111 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
PDE4C-213ENST00000598111 LINC00116Q8NCU8 138 aa16.41■□□□□ 0.22
PDE4C-213ENST00000598111 SLC16A10Q8TF71 515 aa16.41■□□□□ 0.22
PDE4C-213ENST00000598111 LGR6Q9HBX8 967 aa16.41■□□□□ 0.22
PDE4C-213ENST00000598111 PTCD1O75127 700 aaKnown RBP16.4■□□□□ 0.22
PDE4C-213ENST00000598111 ITPK1Q13572 414 aa16.4■□□□□ 0.22
PDE4C-213ENST00000598111 FLAD1Q8NFF5 587 aa16.4■□□□□ 0.22
PDE4C-213ENST00000598111 GNPATO15228 680 aa16.39■□□□□ 0.21
PDE4C-213ENST00000598111 TEFQ10587 303 aa16.39■□□□□ 0.21
PDE4C-213ENST00000598111 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
PDE4C-213ENST00000598111 KCPQ6ZWJ8 1503 aa16.39■□□□□ 0.21
PDE4C-213ENST00000598111 PHF14O94880 888 aa16.38■□□□□ 0.21
PDE4C-213ENST00000598111 PTGER2P43116 358 aa16.38■□□□□ 0.21
PDE4C-213ENST00000598111 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
PDE4C-213ENST00000598111 C4AP0C0L4 1744 aa16.38■□□□□ 0.21
PDE4C-213ENST00000598111 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
PDE4C-213ENST00000598111 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
PDE4C-213ENST00000598111 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
PDE4C-213ENST00000598111 SSFA2P28290 1259 aa16.37■□□□□ 0.21
PDE4C-213ENST00000598111 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
PDE4C-213ENST00000598111 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
PDE4C-213ENST00000598111 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
PDE4C-213ENST00000598111 POLD1P28340 1107 aa16.36■□□□□ 0.21
PDE4C-213ENST00000598111 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
PDE4C-213ENST00000598111 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
PDE4C-213ENST00000598111 PRKRIP1Q9H875 184 aaPredicted RBP16.36■□□□□ 0.21
PDE4C-213ENST00000598111 SRCAPQ6ZRS2 3230 aa16.36■□□□□ 0.21
PDE4C-213ENST00000598111 CEMIPQ8WUJ3 1361 aa16.36■□□□□ 0.21
PDE4C-213ENST00000598111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
PDE4C-213ENST00000598111 SLC39A6Q13433 755 aa16.35■□□□□ 0.21
PDE4C-213ENST00000598111 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
PDE4C-213ENST00000598111 SGIP1Q9BQI5 828 aa16.35■□□□□ 0.21
PDE4C-213ENST00000598111 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
PDE4C-213ENST00000598111 ARXQ96QS3 562 aa16.34■□□□□ 0.21
PDE4C-213ENST00000598111 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
PDE4C-213ENST00000598111 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.2
PDE4C-213ENST00000598111 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
PDE4C-213ENST00000598111 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
PDE4C-213ENST00000598111 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
PDE4C-213ENST00000598111 HTATSF1O43719 755 aaKnown RBP16.31■□□□□ 0.2
PDE4C-213ENST00000598111 ADRA2BP18089 450 aa16.31■□□□□ 0.2
PDE4C-213ENST00000598111 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
PDE4C-213ENST00000598111 MCM10Q7L590 875 aa16.31■□□□□ 0.2
PDE4C-213ENST00000598111 PLEKHF1Q96S99 279 aa16.31■□□□□ 0.2
PDE4C-213ENST00000598111 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
PDE4C-213ENST00000598111 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
PDE4C-213ENST00000598111 NFE2L2Q16236 605 aa16.3■□□□□ 0.2
PDE4C-213ENST00000598111 ZNF790Q6PG37 636 aa16.3■□□□□ 0.2
PDE4C-213ENST00000598111 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
PDE4C-213ENST00000598111 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
PDE4C-213ENST00000598111 FHDC1Q9C0D6 1143 aaPredicted RBP16.3■□□□□ 0.2
PDE4C-213ENST00000598111 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
PDE4C-213ENST00000598111 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
PDE4C-213ENST00000598111 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
PDE4C-213ENST00000598111 CCDC87Q9NVE4 849 aa16.29■□□□□ 0.2
PDE4C-213ENST00000598111 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
PDE4C-213ENST00000598111 HEG1Q9ULI3 1381 aa16.28■□□□□ 0.2
PDE4C-213ENST00000598111 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
PDE4C-213ENST00000598111 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
PDE4C-213ENST00000598111 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
PDE4C-213ENST00000598111 RFC4P35249 363 aa16.27■□□□□ 0.2
PDE4C-213ENST00000598111 ZNF496Q96IT1 587 aaPredicted RBP16.27■□□□□ 0.2
PDE4C-213ENST00000598111 CYP19A1P11511 503 aaPredicted RBP16.26■□□□□ 0.19
PDE4C-213ENST00000598111 SYT17Q9BSW7 474 aa16.26■□□□□ 0.19
PDE4C-213ENST00000598111 STARD3NLO95772 234 aa16.25■□□□□ 0.19
PDE4C-213ENST00000598111 LMOD3Q0VAK6 560 aa16.25■□□□□ 0.19
PDE4C-213ENST00000598111 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
PDE4C-213ENST00000598111 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
PDE4C-213ENST00000598111 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
PDE4C-213ENST00000598111 COL15A1P39059 1388 aa16.25■□□□□ 0.19
PDE4C-213ENST00000598111 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
PDE4C-213ENST00000598111 SOS1Q07889 1333 aaPredicted RBP16.24■□□□□ 0.19
PDE4C-213ENST00000598111 ANP32CO43423 234 aa16.24■□□□□ 0.19
PDE4C-213ENST00000598111 TEX13AQ9BXU3 409 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms