RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
USHBP1-207ENST00000597928 PPRC1Q5VV67 1664 aaKnown RBP15.01□□□□□ -0.01
USHBP1-207ENST00000597928 NBPF7P0C2Y1 421 aaPredicted RBP15□□□□□ -0.01
USHBP1-207ENST00000597928 CLASRPQ8N2M8 674 aaKnown RBP15□□□□□ -0.01
USHBP1-207ENST00000597928 UHRF1BP1LA0JNW5 1464 aa15□□□□□ -0.01
USHBP1-207ENST00000597928 ABCC4O15439 1325 aa15□□□□□ -0.01
USHBP1-207ENST00000597928 KCNA6P17658 529 aa15□□□□□ -0.01
USHBP1-207ENST00000597928 ZMYM3Q14202 1370 aa14.99□□□□□ -0.01
USHBP1-207ENST00000597928 G3BP1Q13283 466 aaKnown RBP eCLIP14.99□□□□□ -0.01
USHBP1-207ENST00000597928 CAMK4Q16566 473 aa14.99□□□□□ -0.01
USHBP1-207ENST00000597928 IQGAP1P46940 1657 aa14.99□□□□□ -0.01
USHBP1-207ENST00000597928 PUS7Q96PZ0 661 aaKnown RBP14.99□□□□□ -0.01
USHBP1-207ENST00000597928 FSD1Q9BTV5 496 aa14.99□□□□□ -0.01
USHBP1-207ENST00000597928 NSFL1CQ9UNZ2 370 aaKnown RBP14.99□□□□□ -0.01
USHBP1-207ENST00000597928 RBSNQ9H1K0 784 aa14.99□□□□□ -0.01
USHBP1-207ENST00000597928 FAM173BQ6P4H8 233 aa14.98□□□□□ -0.01
USHBP1-207ENST00000597928 ESYT1Q9BSJ8 1104 aa14.98□□□□□ -0.01
USHBP1-207ENST00000597928 ABCC3O15438 1527 aa14.97□□□□□ -0.01
USHBP1-207ENST00000597928 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
USHBP1-207ENST00000597928 CNTROBQ8N137 903 aa14.97□□□□□ -0.01
USHBP1-207ENST00000597928 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
USHBP1-207ENST00000597928 IL17REQ8NFR9 667 aa14.97□□□□□ -0.01
USHBP1-207ENST00000597928 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
USHBP1-207ENST00000597928 GLI2P10070 1586 aa14.97□□□□□ -0.01
USHBP1-207ENST00000597928 QRICH2Q9H0J4 1663 aa14.97□□□□□ -0.01
USHBP1-207ENST00000597928 FAM177BA6PVY3 158 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 ATP5J2-PTCD1G3V325 749 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 PTCD1O75127 700 aaKnown RBP14.96□□□□□ -0.01
USHBP1-207ENST00000597928 PTMSP20962 102 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 DDX17Q92841 729 aaKnown RBP14.96□□□□□ -0.01
USHBP1-207ENST00000597928 TFIP11Q9UBB9 837 aaKnown RBP14.96□□□□□ -0.01
USHBP1-207ENST00000597928 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 ZNF853P0CG23 659 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 RTL1A6NKG5 1358 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 GADD45BO75293 160 aaPredicted RBP14.96□□□□□ -0.01
USHBP1-207ENST00000597928 CABLES1Q8TDN4 633 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 LRRC2Q9BYS8 371 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 CNPY2Q9Y2B0 182 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 MAP3K2Q9Y2U5 619 aa14.96□□□□□ -0.01
USHBP1-207ENST00000597928 RHPN1Q8TCX5 695 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 USP25Q9UHP3 1055 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 ROBO2Q9HCK4 1378 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 KLHL40Q2TBA0 621 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 SYAP1Q96A49 352 aaPredicted RBP14.95□□□□□ -0.02
USHBP1-207ENST00000597928 MROH2AA6NES4 1674 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 PTPRCP08575 1304 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 SETD1BQ9UPS6 1966 aaKnown RBP14.95□□□□□ -0.02
USHBP1-207ENST00000597928 CHMLP26374 656 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 GPATCH3Q96I76 525 aa14.95□□□□□ -0.02
USHBP1-207ENST00000597928 ZKSCAN1P17029 563 aaPredicted RBP14.94□□□□□ -0.02
USHBP1-207ENST00000597928 C17orf53Q8N3J3 647 aaPredicted RBP14.94□□□□□ -0.02
USHBP1-207ENST00000597928 DNAAF4Q8WXU2 420 aa14.94□□□□□ -0.02
USHBP1-207ENST00000597928 EDC3Q96F86 508 aaKnown RBP14.94□□□□□ -0.02
USHBP1-207ENST00000597928 SHROOM2Q13796 1616 aa14.94□□□□□ -0.02
USHBP1-207ENST00000597928 KIAA2012Q0VF49 1180 aa14.94□□□□□ -0.02
USHBP1-207ENST00000597928 CCDC173Q0VFZ6 552 aa14.94□□□□□ -0.02
USHBP1-207ENST00000597928 GORABQ5T7V8 394 aa14.94□□□□□ -0.02
USHBP1-207ENST00000597928 ATP8B2P98198 1209 aa14.93□□□□□ -0.02
USHBP1-207ENST00000597928 GIMAP6Q6P9H5 292 aa14.93□□□□□ -0.02
USHBP1-207ENST00000597928 TMEM63CQ9P1W3 806 aa14.93□□□□□ -0.02
USHBP1-207ENST00000597928 PHF8Q9UPP1 1060 aa14.93□□□□□ -0.02
USHBP1-207ENST00000597928 TNRQ92752 1358 aa14.93□□□□□ -0.02
USHBP1-207ENST00000597928 RAB11FIP4Q86YS3 637 aa14.93□□□□□ -0.02
USHBP1-207ENST00000597928 TSPY26PQ9H489 355 aa14.93□□□□□ -0.02
USHBP1-207ENST00000597928 CWC22Q9HCG8 908 aaKnown RBP14.93□□□□□ -0.02
USHBP1-207ENST00000597928 TSPOAP1O95153 1857 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
USHBP1-207ENST00000597928 HOXC9P31274 260 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 NBPF6Q5VWK0 638 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 RAPGEF4Q8WZA2 1011 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 USP48Q86UV5 1035 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 THEMISQ8N1K5 641 aaPredicted RBP14.92□□□□□ -0.02
USHBP1-207ENST00000597928 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 LMBRD1Q9NUN5 540 aa14.92□□□□□ -0.02
USHBP1-207ENST00000597928 EDC4Q6P2E9 1401 aaKnown RBP14.92□□□□□ -0.02
USHBP1-207ENST00000597928 H3BQV1 296 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 NEXNQ0ZGT2 675 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 IQSEC2Q5JU85 1478 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 IFFO2Q5TF58 517 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 CKAP2LQ8IYA6 745 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 GPT2Q8TD30 523 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 LAMC1P11047 1609 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 ADGRB3O60242 1522 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 ZFYVE9O95405 1425 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 FAM135BQ49AJ0 1406 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 FSD2A1L4K1 749 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 TTC5Q8N0Z6 440 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 ORAI2Q96SN7 254 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 MYOM1P52179 1685 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 LRRC7Q96NW7 1537 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 GUCY1B3Q02153 619 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 PDRG1Q9NUG6 133 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 KIDINS220Q9ULH0 1771 aa14.91□□□□□ -0.02
USHBP1-207ENST00000597928 ZSCAN30Q86W11 494 aa14.9□□□□□ -0.02
USHBP1-207ENST00000597928 MYD88Q99836 296 aa14.9□□□□□ -0.02
USHBP1-207ENST00000597928 MLH3Q9UHC1 1453 aa14.9□□□□□ -0.02
USHBP1-207ENST00000597928 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms