RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 SIK1P57059 783 aa16.66■□□□□ 0.26
SOX2-OT-228ENST00000597828 ITPK1Q13572 414 aa16.66■□□□□ 0.26
SOX2-OT-228ENST00000597828 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
SOX2-OT-228ENST00000597828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.66■□□□□ 0.26
SOX2-OT-228ENST00000597828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
SOX2-OT-228ENST00000597828 FLAD1Q8NFF5 587 aa16.64■□□□□ 0.25
SOX2-OT-228ENST00000597828 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
SOX2-OT-228ENST00000597828 ATG3Q9NT62 314 aa16.64■□□□□ 0.25
SOX2-OT-228ENST00000597828 ADAMTS7Q9UKP4 1686 aa16.64■□□□□ 0.25
SOX2-OT-228ENST00000597828 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
SOX2-OT-228ENST00000597828 AEBP1Q8IUX7 1158 aa16.63■□□□□ 0.25
SOX2-OT-228ENST00000597828 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
SOX2-OT-228ENST00000597828 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-228ENST00000597828 GNPATO15228 680 aa16.62■□□□□ 0.25
SOX2-OT-228ENST00000597828 ATP6V1AP38606 617 aa16.62■□□□□ 0.25
SOX2-OT-228ENST00000597828 PLEKHG2Q9H7P9 1386 aa16.62■□□□□ 0.25
SOX2-OT-228ENST00000597828 UBR2Q8IWV8 1755 aa16.61■□□□□ 0.25
SOX2-OT-228ENST00000597828 SSFA2P28290 1259 aa16.61■□□□□ 0.25
SOX2-OT-228ENST00000597828 SLC4A9Q96Q91 983 aa16.61■□□□□ 0.25
SOX2-OT-228ENST00000597828 SIPA1L3O60292 1781 aaPredicted RBP16.6■□□□□ 0.25
SOX2-OT-228ENST00000597828 MORC1Q86VD1 984 aa16.6■□□□□ 0.25
SOX2-OT-228ENST00000597828 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
SOX2-OT-228ENST00000597828 ZNF530Q6P9A1 599 aaPredicted RBP16.59■□□□□ 0.25
SOX2-OT-228ENST00000597828 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
SOX2-OT-228ENST00000597828 CCDC88AQ3V6T2 1871 aa16.58■□□□□ 0.24
SOX2-OT-228ENST00000597828 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
SOX2-OT-228ENST00000597828 C1QTNF8P60827 252 aa16.57■□□□□ 0.24
SOX2-OT-228ENST00000597828 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
SOX2-OT-228ENST00000597828 SBF1O95248 1867 aa16.56■□□□□ 0.24
SOX2-OT-228ENST00000597828 PXDNLA1KZ92 1463 aa16.56■□□□□ 0.24
SOX2-OT-228ENST00000597828 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
SOX2-OT-228ENST00000597828 ERVV-2B6SEH9 535 aa16.56■□□□□ 0.24
SOX2-OT-228ENST00000597828 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
SOX2-OT-228ENST00000597828 HMGB2P26583 209 aaKnown RBP16.56■□□□□ 0.24
SOX2-OT-228ENST00000597828 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
SOX2-OT-228ENST00000597828 MRC1P22897 1456 aa16.55■□□□□ 0.24
SOX2-OT-228ENST00000597828 CACNA1SQ13698 1873 aa16.55■□□□□ 0.24
SOX2-OT-228ENST00000597828 SENP3-EIF4A1A0A087X0R7 540 aa16.55■□□□□ 0.24
SOX2-OT-228ENST00000597828 SULT6B1Q6IMI4 303 aa16.55■□□□□ 0.24
SOX2-OT-228ENST00000597828 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
SOX2-OT-228ENST00000597828 DLEC1Q9Y238 1755 aa16.55■□□□□ 0.24
SOX2-OT-228ENST00000597828 ADCY9O60503 1353 aa16.54■□□□□ 0.24
SOX2-OT-228ENST00000597828 GIGYF1O75420 1035 aaPredicted RBP16.54■□□□□ 0.24
SOX2-OT-228ENST00000597828 HSP90AB1P08238 724 aaKnown RBP16.54■□□□□ 0.24
SOX2-OT-228ENST00000597828 CABP4P57796 275 aa16.54■□□□□ 0.24
SOX2-OT-228ENST00000597828 AMER1Q5JTC6 1135 aaPredicted RBP16.54■□□□□ 0.24
SOX2-OT-228ENST00000597828 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
SOX2-OT-228ENST00000597828 MMP10P09238 476 aa16.53■□□□□ 0.24
SOX2-OT-228ENST00000597828 IL13P35225 146 aa16.53■□□□□ 0.24
SOX2-OT-228ENST00000597828 RTCBQ9Y3I0 505 aaKnown RBP16.53■□□□□ 0.24
SOX2-OT-228ENST00000597828 CNTNAP4Q9C0A0 1308 aa16.52■□□□□ 0.24
SOX2-OT-228ENST00000597828 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.24
SOX2-OT-228ENST00000597828 MTHFSP49914 203 aa16.52■□□□□ 0.24
SOX2-OT-228ENST00000597828 AMOTQ4VCS5 1084 aa16.52■□□□□ 0.24
SOX2-OT-228ENST00000597828 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
SOX2-OT-228ENST00000597828 NRXN2Q9P2S2 1712 aa16.51■□□□□ 0.23
SOX2-OT-228ENST00000597828 COL3A1P02461 1466 aaPredicted RBP16.51■□□□□ 0.23
SOX2-OT-228ENST00000597828 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
SOX2-OT-228ENST00000597828 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
SOX2-OT-228ENST00000597828 ARHGEF1Q92888 912 aaKnown RBP16.51■□□□□ 0.23
SOX2-OT-228ENST00000597828 TRAPPC3LQ5T215 181 aa16.5■□□□□ 0.23
SOX2-OT-228ENST00000597828 HMOX1P09601 288 aa16.49■□□□□ 0.23
SOX2-OT-228ENST00000597828 GYS1P13807 737 aa16.49■□□□□ 0.23
SOX2-OT-228ENST00000597828 ANKRD31Q8N7Z5 1873 aa16.49■□□□□ 0.23
SOX2-OT-228ENST00000597828 ZNF526Q8TF50 670 aaPredicted RBP16.49■□□□□ 0.23
SOX2-OT-228ENST00000597828 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
SOX2-OT-228ENST00000597828 RPS6KA4O75676 772 aa16.48■□□□□ 0.23
SOX2-OT-228ENST00000597828 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
SOX2-OT-228ENST00000597828 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
SOX2-OT-228ENST00000597828 SCN7AQ01118 1682 aa16.48■□□□□ 0.23
SOX2-OT-228ENST00000597828 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
SOX2-OT-228ENST00000597828 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
SOX2-OT-228ENST00000597828 PER1O15534 1290 aaPredicted RBP16.46■□□□□ 0.23
SOX2-OT-228ENST00000597828 ADRA2BP18089 450 aa16.46■□□□□ 0.23
SOX2-OT-228ENST00000597828 RFC4P35249 363 aa16.46■□□□□ 0.23
SOX2-OT-228ENST00000597828 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
SOX2-OT-228ENST00000597828 LGR6Q9HBX8 967 aa16.46■□□□□ 0.23
SOX2-OT-228ENST00000597828 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
SOX2-OT-228ENST00000597828 A0A0G2JLW4 131 aa16.45■□□□□ 0.22
SOX2-OT-228ENST00000597828 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
SOX2-OT-228ENST00000597828 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
SOX2-OT-228ENST00000597828 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
SOX2-OT-228ENST00000597828 TIAM2Q8IVF5 1701 aa16.45■□□□□ 0.22
SOX2-OT-228ENST00000597828 SLC39A6Q13433 755 aa16.44■□□□□ 0.22
SOX2-OT-228ENST00000597828 DNAJC10Q8IXB1 793 aa16.44■□□□□ 0.22
SOX2-OT-228ENST00000597828 SLC52A2Q9HAB3 445 aa16.44■□□□□ 0.22
SOX2-OT-228ENST00000597828 GPBP1L1Q9HC44 474 aaPredicted RBP16.44■□□□□ 0.22
SOX2-OT-228ENST00000597828 USP42Q9H9J4 1324 aaKnown RBP16.44■□□□□ 0.22
SOX2-OT-228ENST00000597828 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
SOX2-OT-228ENST00000597828 DPEP1P16444 411 aa16.43■□□□□ 0.22
SOX2-OT-228ENST00000597828 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
SOX2-OT-228ENST00000597828 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
SOX2-OT-228ENST00000597828 BCS1LQ9Y276 419 aa16.43■□□□□ 0.22
SOX2-OT-228ENST00000597828 CEP350Q5VT06 3117 aa16.42■□□□□ 0.22
SOX2-OT-228ENST00000597828 DDR1Q08345 913 aa16.42■□□□□ 0.22
SOX2-OT-228ENST00000597828 FKBP8Q14318 412 aa16.42■□□□□ 0.22
SOX2-OT-228ENST00000597828 MTHFSDQ2M296 383 aaKnown RBP16.42■□□□□ 0.22
SOX2-OT-228ENST00000597828 PARP3Q9Y6F1 533 aa16.42■□□□□ 0.22
SOX2-OT-228ENST00000597828 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
SOX2-OT-228ENST00000597828 TNRC6CQ9HCJ0 1690 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms