RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
PDE4C-210ENST00000597297 SBF2Q86WG5 1849 aa15.17■□□□□ 0.02
PDE4C-210ENST00000597297 PDE3AQ14432 1141 aa15.16■□□□□ 0.02
PDE4C-210ENST00000597297 MTHFSDQ2M296 383 aaKnown RBP15.16■□□□□ 0.02
PDE4C-210ENST00000597297 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
PDE4C-210ENST00000597297 CYP27B1O15528 508 aa15.15■□□□□ 0.02
PDE4C-210ENST00000597297 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
PDE4C-210ENST00000597297 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
PDE4C-210ENST00000597297 BCL11BQ9C0K0 894 aaPredicted RBP15.15■□□□□ 0.02
PDE4C-210ENST00000597297 BCL9O00512 1426 aa15.15■□□□□ 0.02
PDE4C-210ENST00000597297 BAG6P46379 1132 aa15.15■□□□□ 0.02
PDE4C-210ENST00000597297 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
PDE4C-210ENST00000597297 MBIPQ9NS73 344 aa15.15■□□□□ 0.02
PDE4C-210ENST00000597297 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
PDE4C-210ENST00000597297 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
PDE4C-210ENST00000597297 CAMKK2Q96RR4 588 aa15.14■□□□□ 0.01
PDE4C-210ENST00000597297 SHANK3Q9BYB0 1731 aa15.14■□□□□ 0.01
PDE4C-210ENST00000597297 MCM10Q7L590 875 aa15.13■□□□□ 0.01
PDE4C-210ENST00000597297 SMC4Q9NTJ3 1288 aa15.13■□□□□ 0.01
PDE4C-210ENST00000597297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.01
PDE4C-210ENST00000597297 SPG7Q9UQ90 795 aa15.13■□□□□ 0.01
PDE4C-210ENST00000597297 ALDH1L2Q3SY69 923 aa15.12■□□□□ 0.01
PDE4C-210ENST00000597297 SSH1Q8WYL5 1049 aa15.12■□□□□ 0.01
PDE4C-210ENST00000597297 ZNF428Q96B54 188 aa15.12■□□□□ 0.01
PDE4C-210ENST00000597297 TNS1Q9HBL0 1735 aaKnown RBP15.12■□□□□ 0.01
PDE4C-210ENST00000597297 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
PDE4C-210ENST00000597297 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
PDE4C-210ENST00000597297 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
PDE4C-210ENST00000597297 PCDH11XQ9BZA7 1347 aa15.11■□□□□ 0.01
PDE4C-210ENST00000597297 PCDH11YQ9BZA8 1340 aa15.11■□□□□ 0.01
PDE4C-210ENST00000597297 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
PDE4C-210ENST00000597297 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
PDE4C-210ENST00000597297 MAP3K5Q99683 1374 aa15.1■□□□□ 0.01
PDE4C-210ENST00000597297 CHL1O00533 1208 aa15.1■□□□□ 0.01
PDE4C-210ENST00000597297 PLSCR1O15162 318 aa15.1■□□□□ 0.01
PDE4C-210ENST00000597297 PHKG2P15735 406 aa15.1■□□□□ 0.01
PDE4C-210ENST00000597297 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
PDE4C-210ENST00000597297 PANK1Q8TE04 598 aa15.1■□□□□ 0.01
PDE4C-210ENST00000597297 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
PDE4C-210ENST00000597297 VAMP4O75379 141 aa15.09■□□□□ 0.01
PDE4C-210ENST00000597297 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
PDE4C-210ENST00000597297 PROM2Q8N271 834 aa15.09■□□□□ 0.01
PDE4C-210ENST00000597297 SYTL4Q96C24 671 aaPredicted RBP15.09■□□□□ 0.01
PDE4C-210ENST00000597297 VIRMAQ69YN4 1812 aaKnown RBP15.09■□□□□ 0.01
PDE4C-210ENST00000597297 KIF16BQ96L93 1317 aa15.09■□□□□ 0.01
PDE4C-210ENST00000597297 PKD1L3Q7Z443 1732 aa15.08■□□□□ 0.01
PDE4C-210ENST00000597297 MS4A1P11836 297 aa15.08■□□□□ 0
PDE4C-210ENST00000597297 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0
PDE4C-210ENST00000597297 AMOTQ4VCS5 1084 aa15.08■□□□□ 0
PDE4C-210ENST00000597297 TSHZ2Q9NRE2 1034 aa15.08■□□□□ 0
PDE4C-210ENST00000597297 TNNQ9UQP3 1299 aa15.08■□□□□ 0
PDE4C-210ENST00000597297 COG6Q9Y2V7 657 aa15.08■□□□□ 0
PDE4C-210ENST00000597297 BRPF1P55201 1214 aaPredicted RBP15.07■□□□□ 0
PDE4C-210ENST00000597297 TSPYL6Q8N831 410 aa15.07■□□□□ 0
PDE4C-210ENST00000597297 RLBP1P12271 317 aa15.07■□□□□ 0
PDE4C-210ENST00000597297 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
PDE4C-210ENST00000597297 C8orf58Q8NAV2 365 aa15.07■□□□□ 0
PDE4C-210ENST00000597297 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
PDE4C-210ENST00000597297 DZIP1LQ8IYY4 767 aaKnown RBP15.06■□□□□ 0
PDE4C-210ENST00000597297 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
PDE4C-210ENST00000597297 NHSQ6T4R5 1651 aa15.05■□□□□ 0
PDE4C-210ENST00000597297 IPO8O15397 1037 aaKnown RBP15.05■□□□□ -0
PDE4C-210ENST00000597297 AAMPQ13685 434 aa15.05■□□□□ -0
PDE4C-210ENST00000597297 ATF7IPQ6VMQ6 1270 aa15.05■□□□□ -0
PDE4C-210ENST00000597297 FTSJ3Q8IY81 847 aaKnown RBP15.05■□□□□ -0
PDE4C-210ENST00000597297 MRPL50Q8N5N7 158 aaKnown RBP15.05■□□□□ -0
PDE4C-210ENST00000597297 KDM2BQ8NHM5 1336 aa15.04■□□□□ -0
PDE4C-210ENST00000597297 ELL2O00472 640 aaPredicted RBP15.04■□□□□ -0
PDE4C-210ENST00000597297 TRIM27P14373 513 aa15.04■□□□□ -0
PDE4C-210ENST00000597297 TXNRD1Q16881 649 aa15.04■□□□□ -0
PDE4C-210ENST00000597297 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
PDE4C-210ENST00000597297 BTAF1O14981 1849 aa15.04■□□□□ -0
PDE4C-210ENST00000597297 DOT1LQ8TEK3 1739 aa15.04■□□□□ -0
PDE4C-210ENST00000597297 PLEKHG2Q9H7P9 1386 aa15.04■□□□□ -0
PDE4C-210ENST00000597297 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
PDE4C-210ENST00000597297 IL17REQ8NFR9 667 aa15.03■□□□□ -0
PDE4C-210ENST00000597297 PIGBQ92521 554 aa15.03■□□□□ -0
PDE4C-210ENST00000597297 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
PDE4C-210ENST00000597297 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
PDE4C-210ENST00000597297 C1orf141Q5JVX7 400 aa15.02■□□□□ -0
PDE4C-210ENST00000597297 CENPQQ7L2Z9 268 aaPredicted RBP15.02■□□□□ -0
PDE4C-210ENST00000597297 ITGB4P16144 1822 aa15.02■□□□□ -0
PDE4C-210ENST00000597297 CEMIPQ8WUJ3 1361 aa15.02■□□□□ -0
PDE4C-210ENST00000597297 AKAP4Q5JQC9 854 aa15.02□□□□□ -0.01
PDE4C-210ENST00000597297 DCAF5Q96JK2 942 aa15.02□□□□□ -0.01
PDE4C-210ENST00000597297 LGR6Q9HBX8 967 aa15.02□□□□□ -0.01
PDE4C-210ENST00000597297 BABAM1Q9NWV8 329 aa15.02□□□□□ -0.01
PDE4C-210ENST00000597297 ADAMTS7Q9UKP4 1686 aa15.01□□□□□ -0.01
PDE4C-210ENST00000597297 HSP90AB1P08238 724 aaKnown RBP15.01□□□□□ -0.01
PDE4C-210ENST00000597297 KCNQ4P56696 695 aa15.01□□□□□ -0.01
PDE4C-210ENST00000597297 KRT24Q2M2I5 525 aa15.01□□□□□ -0.01
PDE4C-210ENST00000597297 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
PDE4C-210ENST00000597297 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
PDE4C-210ENST00000597297 MIS18AQ9NYP9 233 aa15.01□□□□□ -0.01
PDE4C-210ENST00000597297 TOGARAM1Q9Y4F4 1720 aa15.01□□□□□ -0.01
PDE4C-210ENST00000597297 ERVV-2B6SEH9 535 aa15□□□□□ -0.01
PDE4C-210ENST00000597297 SIPA1L3O60292 1781 aaPredicted RBP15□□□□□ -0.01
PDE4C-210ENST00000597297 PSDA5PKW4 1024 aaPredicted RBP14.99□□□□□ -0.01
PDE4C-210ENST00000597297 TAF7Q15545 349 aaPredicted RBP14.99□□□□□ -0.01
PDE4C-210ENST00000597297 TMOD3Q9NYL9 352 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms