RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 PAPPAQ13219 1627 aa11.41□□□□□ -0.58
SNRPA-202ENST00000596860 BRWD3Q6RI45 1802 aa11.4□□□□□ -0.58
SNRPA-202ENST00000596860 SBF2Q86WG5 1849 aa11.4□□□□□ -0.58
SNRPA-202ENST00000596860 MPRIPQ6WCQ1 1025 aa11.4□□□□□ -0.58
SNRPA-202ENST00000596860 MCM10Q7L590 875 aa11.4□□□□□ -0.58
SNRPA-202ENST00000596860 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
SNRPA-202ENST00000596860 DOT1LQ8TEK3 1739 aa11.4□□□□□ -0.58
SNRPA-202ENST00000596860 NHSQ6T4R5 1651 aa11.4□□□□□ -0.59
SNRPA-202ENST00000596860 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
SNRPA-202ENST00000596860 SEPT12Q8IYM1 358 aa11.39□□□□□ -0.59
SNRPA-202ENST00000596860 MARCH10Q8NA82 808 aaPredicted RBP11.39□□□□□ -0.59
SNRPA-202ENST00000596860 DDX54Q8TDD1 881 aaKnown RBP11.39□□□□□ -0.59
SNRPA-202ENST00000596860 LGR6Q9HBX8 967 aa11.39□□□□□ -0.59
SNRPA-202ENST00000596860 ZNF831Q5JPB2 1677 aa11.39□□□□□ -0.59
SNRPA-202ENST00000596860 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
SNRPA-202ENST00000596860 HOXB7P09629 217 aa11.38□□□□□ -0.59
SNRPA-202ENST00000596860 ADRA2BP18089 450 aa11.38□□□□□ -0.59
SNRPA-202ENST00000596860 DCTN1Q14203 1278 aa11.38□□□□□ -0.59
SNRPA-202ENST00000596860 KAT6BQ8WYB5 2073 aa11.38□□□□□ -0.59
SNRPA-202ENST00000596860 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
SNRPA-202ENST00000596860 CABP4P57796 275 aa11.37□□□□□ -0.59
SNRPA-202ENST00000596860 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
SNRPA-202ENST00000596860 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
SNRPA-202ENST00000596860 SPINK5Q9NQ38 1064 aaPredicted RBP11.37□□□□□ -0.59
SNRPA-202ENST00000596860 MBIPQ9NS73 344 aa11.37□□□□□ -0.59
SNRPA-202ENST00000596860 HEG1Q9ULI3 1381 aa11.37□□□□□ -0.59
SNRPA-202ENST00000596860 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
SNRPA-202ENST00000596860 HMGB2P26583 209 aaKnown RBP11.36□□□□□ -0.59
SNRPA-202ENST00000596860 TMOD3Q9NYL9 352 aa11.36□□□□□ -0.59
SNRPA-202ENST00000596860 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
SNRPA-202ENST00000596860 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
SNRPA-202ENST00000596860 KRT27Q7Z3Y8 459 aa11.35□□□□□ -0.59
SNRPA-202ENST00000596860 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
SNRPA-202ENST00000596860 LAMB4A4D0S4 1761 aa11.34□□□□□ -0.59
SNRPA-202ENST00000596860 A0A0G2JS52 829 aa11.34□□□□□ -0.59
SNRPA-202ENST00000596860 BRPF1P55201 1214 aaPredicted RBP11.34□□□□□ -0.59
SNRPA-202ENST00000596860 MYT1Q01538 1121 aa11.34□□□□□ -0.59
SNRPA-202ENST00000596860 ZNF790Q6PG37 636 aa11.34□□□□□ -0.59
SNRPA-202ENST00000596860 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
SNRPA-202ENST00000596860 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
SNRPA-202ENST00000596860 ALDH1L2Q3SY69 923 aa11.33□□□□□ -0.6
SNRPA-202ENST00000596860 TTC5Q8N0Z6 440 aa11.33□□□□□ -0.6
SNRPA-202ENST00000596860 SMARCC1Q92922 1105 aaPredicted RBP11.33□□□□□ -0.6
SNRPA-202ENST00000596860 FMNL2Q96PY5 1086 aa11.33□□□□□ -0.6
SNRPA-202ENST00000596860 KCPQ6ZWJ8 1503 aa11.33□□□□□ -0.6
SNRPA-202ENST00000596860 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
SNRPA-202ENST00000596860 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
SNRPA-202ENST00000596860 BTAF1O14981 1849 aa11.32□□□□□ -0.6
SNRPA-202ENST00000596860 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
SNRPA-202ENST00000596860 PIGBQ92521 554 aa11.32□□□□□ -0.6
SNRPA-202ENST00000596860 TSR2Q969E8 191 aaKnown RBP11.32□□□□□ -0.6
SNRPA-202ENST00000596860 TEX13AQ9BXU3 409 aaPredicted RBP11.32□□□□□ -0.6
SNRPA-202ENST00000596860 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
SNRPA-202ENST00000596860 LY75O60449 1722 aa11.32□□□□□ -0.6
SNRPA-202ENST00000596860 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
SNRPA-202ENST00000596860 VAMP4O75379 141 aa11.31□□□□□ -0.6
SNRPA-202ENST00000596860 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
SNRPA-202ENST00000596860 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
SNRPA-202ENST00000596860 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
SNRPA-202ENST00000596860 ERBB4Q15303 1308 aa11.31□□□□□ -0.6
SNRPA-202ENST00000596860 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
SNRPA-202ENST00000596860 SNRPA1P09661 255 aaKnown RBP11.3□□□□□ -0.6
SNRPA-202ENST00000596860 ATG3Q9NT62 314 aa11.3□□□□□ -0.6
SNRPA-202ENST00000596860 C8orf58Q8NAV2 365 aa11.29□□□□□ -0.6
SNRPA-202ENST00000596860 RCAN3Q9UKA8 241 aa11.29□□□□□ -0.6
SNRPA-202ENST00000596860 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
SNRPA-202ENST00000596860 C5P01031 1676 aa11.28□□□□□ -0.6
SNRPA-202ENST00000596860 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
SNRPA-202ENST00000596860 SF3B2Q13435 895 aaKnown RBP11.28□□□□□ -0.6
SNRPA-202ENST00000596860 CCDC30Q5VVM6 783 aa11.28□□□□□ -0.6
SNRPA-202ENST00000596860 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
SNRPA-202ENST00000596860 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
SNRPA-202ENST00000596860 RREB1Q92766 1687 aa11.27□□□□□ -0.6
SNRPA-202ENST00000596860 TJP1Q07157 1748 aa11.27□□□□□ -0.61
SNRPA-202ENST00000596860 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
SNRPA-202ENST00000596860 KIF16BQ96L93 1317 aa11.27□□□□□ -0.61
SNRPA-202ENST00000596860 LRP5O75197 1615 aa11.27□□□□□ -0.61
SNRPA-202ENST00000596860 PALLDQ8WX93 1383 aa11.27□□□□□ -0.61
SNRPA-202ENST00000596860 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
SNRPA-202ENST00000596860 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
SNRPA-202ENST00000596860 KCNQ3O43525 872 aa11.26□□□□□ -0.61
SNRPA-202ENST00000596860 SLC39A6Q13433 755 aa11.26□□□□□ -0.61
SNRPA-202ENST00000596860 TSPYL6Q8N831 410 aa11.26□□□□□ -0.61
SNRPA-202ENST00000596860 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
SNRPA-202ENST00000596860 SYTL4Q96C24 671 aaPredicted RBP11.26□□□□□ -0.61
SNRPA-202ENST00000596860 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
SNRPA-202ENST00000596860 ASAP1Q9ULH1 1129 aa11.26□□□□□ -0.61
SNRPA-202ENST00000596860 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
SNRPA-202ENST00000596860 PLSCR1O15162 318 aa11.25□□□□□ -0.61
SNRPA-202ENST00000596860 KCNQ2O43526 872 aa11.25□□□□□ -0.61
SNRPA-202ENST00000596860 STARD3NLO95772 234 aa11.25□□□□□ -0.61
SNRPA-202ENST00000596860 MS4A1P11836 297 aa11.25□□□□□ -0.61
SNRPA-202ENST00000596860 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
SNRPA-202ENST00000596860 STK31Q9BXU1 1019 aa11.25□□□□□ -0.61
SNRPA-202ENST00000596860 DBF4Q9UBU7 674 aaPredicted RBP11.25□□□□□ -0.61
SNRPA-202ENST00000596860 LOC102724428A0A0B4J2F2 783 aa11.24□□□□□ -0.61
SNRPA-202ENST00000596860 IPO8O15397 1037 aaKnown RBP11.24□□□□□ -0.61
SNRPA-202ENST00000596860 SIK1P57059 783 aa11.24□□□□□ -0.61
SNRPA-202ENST00000596860 HDGFL1Q5TGJ6 251 aa11.24□□□□□ -0.61
SNRPA-202ENST00000596860 SSH1Q8WYL5 1049 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms