RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 FANCIQ9NVI1 1328 aa27.19■■□□□ 1.94
IRF3-214ENST00000596788 GNAI1P63096 354 aa27.19■■□□□ 1.94
IRF3-214ENST00000596788 CFAP44Q96MT7 982 aa27.19■■□□□ 1.94
IRF3-214ENST00000596788 SLC52A2Q9HAB3 445 aa27.19■■□□□ 1.94
IRF3-214ENST00000596788 DUSP27Q5VZP5 1158 aa27.18■■□□□ 1.94
IRF3-214ENST00000596788 TSR2Q969E8 191 aaKnown RBP27.18■■□□□ 1.94
IRF3-214ENST00000596788 ERVV-2B6SEH9 535 aa27.17■■□□□ 1.94
IRF3-214ENST00000596788 TAF7Q15545 349 aaPredicted RBP27.17■■□□□ 1.94
IRF3-214ENST00000596788 MYH16Q9H6N6 1097 aa27.17■■□□□ 1.94
IRF3-214ENST00000596788 BCL9O00512 1426 aa27.16■■□□□ 1.94
IRF3-214ENST00000596788 CHL1O00533 1208 aa27.16■■□□□ 1.94
IRF3-214ENST00000596788 CABP4P57796 275 aa27.16■■□□□ 1.94
IRF3-214ENST00000596788 MBIPQ9NS73 344 aa27.16■■□□□ 1.94
IRF3-214ENST00000596788 UBR2Q8IWV8 1755 aa27.16■■□□□ 1.94
IRF3-214ENST00000596788 MIS18AQ9NYP9 233 aa27.15■■□□□ 1.94
IRF3-214ENST00000596788 KAT6BQ8WYB5 2073 aa27.14■■□□□ 1.94
IRF3-214ENST00000596788 FAM182BQ5T319 152 aa27.14■■□□□ 1.94
IRF3-214ENST00000596788 NFATC2IPQ8NCF5 419 aa27.14■■□□□ 1.94
IRF3-214ENST00000596788 TSPYL4Q9UJ04 414 aa27.14■■□□□ 1.94
IRF3-214ENST00000596788 KRT27Q7Z3Y8 459 aa27.13■■□□□ 1.93
IRF3-214ENST00000596788 BABAM1Q9NWV8 329 aa27.12■■□□□ 1.93
IRF3-214ENST00000596788 BTBD11A6QL63 1104 aa27.11■■□□□ 1.93
IRF3-214ENST00000596788 ACSBG1Q96GR2 724 aa27.11■■□□□ 1.93
IRF3-214ENST00000596788 TMOD3Q9NYL9 352 aa27.11■■□□□ 1.93
IRF3-214ENST00000596788 BTAF1O14981 1849 aa27.11■■□□□ 1.93
IRF3-214ENST00000596788 PRIM1P49642 420 aaKnown RBP27.09■■□□□ 1.93
IRF3-214ENST00000596788 KCPQ6ZWJ8 1503 aa27.08■■□□□ 1.93
IRF3-214ENST00000596788 KCNQ3O43525 872 aa27.08■■□□□ 1.93
IRF3-214ENST00000596788 PIGBQ92521 554 aa27.08■■□□□ 1.93
IRF3-214ENST00000596788 C5P01031 1676 aa27.08■■□□□ 1.92
IRF3-214ENST00000596788 SYTL4Q96C24 671 aaPredicted RBP27.07■■□□□ 1.92
IRF3-214ENST00000596788 EXOSC9Q06265 439 aaKnown RBP27.06■■□□□ 1.92
IRF3-214ENST00000596788 SLC39A6Q13433 755 aa27.06■■□□□ 1.92
IRF3-214ENST00000596788 KCNQ2O43526 872 aa27.05■■□□□ 1.92
IRF3-214ENST00000596788 CENPBP07199 599 aaPredicted RBP27.05■■□□□ 1.92
IRF3-214ENST00000596788 KRT24Q2M2I5 525 aa27.04■■□□□ 1.92
IRF3-214ENST00000596788 ZNF790Q6PG37 636 aa27.04■■□□□ 1.92
IRF3-214ENST00000596788 LAMB4A4D0S4 1761 aa27.03■■□□□ 1.92
IRF3-214ENST00000596788 EIF4A1P60842 406 aaKnown RBP27.02■■□□□ 1.92
IRF3-214ENST00000596788 FAM196AQ6ZSG2 479 aa27.02■■□□□ 1.92
IRF3-214ENST00000596788 C8orf58Q8NAV2 365 aa27.02■■□□□ 1.92
IRF3-214ENST00000596788 PTF1AQ7RTS3 328 aa27.01■■□□□ 1.91
IRF3-214ENST00000596788 TNS1Q9HBL0 1735 aaKnown RBP27■■□□□ 1.91
IRF3-214ENST00000596788 TTC5Q8N0Z6 440 aa27■■□□□ 1.91
IRF3-214ENST00000596788 TSPYL6Q8N831 410 aa27■■□□□ 1.91
IRF3-214ENST00000596788 ATG3Q9NT62 314 aa27■■□□□ 1.91
IRF3-214ENST00000596788 ASAP1Q9ULH1 1129 aa27■■□□□ 1.91
IRF3-214ENST00000596788 HEG1Q9ULI3 1381 aa26.99■■□□□ 1.91
IRF3-214ENST00000596788 TJP1Q07157 1748 aa26.99■■□□□ 1.91
IRF3-214ENST00000596788 ZNF496Q96IT1 587 aaPredicted RBP26.98■■□□□ 1.91
IRF3-214ENST00000596788 CICQ96RK0 1608 aaPredicted RBP26.98■■□□□ 1.91
IRF3-214ENST00000596788 LY75O60449 1722 aa26.97■■□□□ 1.91
IRF3-214ENST00000596788 ELL2O00472 640 aaPredicted RBP26.96■■□□□ 1.91
IRF3-214ENST00000596788 TWISTNBQ3B726 338 aaPredicted RBP26.96■■□□□ 1.91
IRF3-214ENST00000596788 FMNL2Q96PY5 1086 aa26.95■■□□□ 1.9
IRF3-214ENST00000596788 ZNF831Q5JPB2 1677 aa26.95■■□□□ 1.9
IRF3-214ENST00000596788 CT47B1P0C2W7 299 aaPredicted RBP26.94■■□□□ 1.9
IRF3-214ENST00000596788 BCL11BQ9C0K0 894 aaPredicted RBP26.94■■□□□ 1.9
IRF3-214ENST00000596788 PALLDQ8WX93 1383 aa26.94■■□□□ 1.9
IRF3-214ENST00000596788 VAMP4O75379 141 aa26.93■■□□□ 1.9
IRF3-214ENST00000596788 EP400Q96L91 3159 aa26.92■■□□□ 1.9
IRF3-214ENST00000596788 PTCD1O75127 700 aaKnown RBP26.92■■□□□ 1.9
IRF3-214ENST00000596788 SOS1Q07889 1333 aaPredicted RBP26.91■■□□□ 1.9
IRF3-214ENST00000596788 PRAMEF22A3QJZ6 481 aa26.91■■□□□ 1.9
IRF3-214ENST00000596788 GIGYF1O75420 1035 aaPredicted RBP26.91■■□□□ 1.9
IRF3-214ENST00000596788 TRIM37O94972 964 aa26.91■■□□□ 1.9
IRF3-214ENST00000596788 RCAN3Q9UKA8 241 aa26.91■■□□□ 1.9
IRF3-214ENST00000596788 HOXB7P09629 217 aa26.9■■□□□ 1.9
IRF3-214ENST00000596788 SMARCC1Q92922 1105 aaPredicted RBP26.9■■□□□ 1.9
IRF3-214ENST00000596788 COL5A3P25940 1745 aaPredicted RBP26.9■■□□□ 1.9
IRF3-214ENST00000596788 SLC4A9Q96Q91 983 aa26.88■■□□□ 1.89
IRF3-214ENST00000596788 RBM42Q9BTD8 480 aaKnown RBP26.88■■□□□ 1.89
IRF3-214ENST00000596788 SNRPA1P09661 255 aaKnown RBP26.87■■□□□ 1.89
IRF3-214ENST00000596788 RARSP54136 660 aaKnown RBP26.87■■□□□ 1.89
IRF3-214ENST00000596788 RGPD3A6NKT7 1758 aaPredicted RBP26.86■■□□□ 1.89
IRF3-214ENST00000596788 RGPD4Q7Z3J3 1758 aa26.86■■□□□ 1.89
IRF3-214ENST00000596788 VSIG10Q8N0Z9 540 aa26.85■■□□□ 1.89
IRF3-214ENST00000596788 ZNF428Q96B54 188 aa26.85■■□□□ 1.89
IRF3-214ENST00000596788 CACNA1FO60840 1977 aa26.85■■□□□ 1.89
IRF3-214ENST00000596788 TAF1LQ8IZX4 1826 aa26.85■■□□□ 1.89
IRF3-214ENST00000596788 LOC102724428A0A0B4J2F2 783 aa26.84■■□□□ 1.89
IRF3-214ENST00000596788 TCERG1O14776 1098 aaKnown RBP26.84■■□□□ 1.89
IRF3-214ENST00000596788 SIK1P57059 783 aa26.84■■□□□ 1.89
IRF3-214ENST00000596788 HDGFL1Q5TGJ6 251 aa26.84■■□□□ 1.89
IRF3-214ENST00000596788 SSH1Q8WYL5 1049 aa26.84■■□□□ 1.89
IRF3-214ENST00000596788 BCL2L13Q9BXK5 485 aa26.84■■□□□ 1.89
IRF3-214ENST00000596788 RREB1Q92766 1687 aa26.84■■□□□ 1.89
IRF3-214ENST00000596788 NECTIN2Q92692 538 aa26.83■■□□□ 1.89
IRF3-214ENST00000596788 EIF2S2P20042 333 aaKnown RBP26.82■■□□□ 1.88
IRF3-214ENST00000596788 ALDH1L2Q3SY69 923 aa26.82■■□□□ 1.88
IRF3-214ENST00000596788 DNAJC10Q8IXB1 793 aa26.82■■□□□ 1.88
IRF3-214ENST00000596788 BCAR3O75815 825 aa26.81■■□□□ 1.88
IRF3-214ENST00000596788 SMC4Q9NTJ3 1288 aa26.81■■□□□ 1.88
IRF3-214ENST00000596788 USP16Q9Y5T5 823 aa26.81■■□□□ 1.88
IRF3-214ENST00000596788 CCDC30Q5VVM6 783 aa26.8■■□□□ 1.88
IRF3-214ENST00000596788 ITPK1Q13572 414 aa26.79■■□□□ 1.88
IRF3-214ENST00000596788 ATP6V1AP38606 617 aa26.78■■□□□ 1.88
IRF3-214ENST00000596788 MRPL50Q8N5N7 158 aaKnown RBP26.78■■□□□ 1.88
IRF3-214ENST00000596788 CHPF2Q9P2E5 772 aa26.78■■□□□ 1.88
IRF3-214ENST00000596788 TEX13AQ9BXU3 409 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms