RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 MRC1P22897 1456 aa25.66■■□□□ 1.7
HOMER3-209ENST00000596482 PNPLA7Q6ZV29 1317 aa25.64■■□□□ 1.7
HOMER3-209ENST00000596482 PRKAR2BP31323 418 aa25.64■■□□□ 1.7
HOMER3-209ENST00000596482 RSPH6AQ9H0K4 717 aa25.64■■□□□ 1.7
HOMER3-209ENST00000596482 AK7Q96M32 723 aa25.63■■□□□ 1.69
HOMER3-209ENST00000596482 MAP3K5Q99683 1374 aa25.63■■□□□ 1.69
HOMER3-209ENST00000596482 ADAMTS7Q9UKP4 1686 aa25.62■■□□□ 1.69
HOMER3-209ENST00000596482 ATF5Q9Y2D1 282 aaPredicted RBP25.62■■□□□ 1.69
HOMER3-209ENST00000596482 RNMTO43148 476 aaKnown RBP25.61■■□□□ 1.69
HOMER3-209ENST00000596482 ATP6V1AP38606 617 aa25.61■■□□□ 1.69
HOMER3-209ENST00000596482 NFATC2IPQ8NCF5 419 aa25.61■■□□□ 1.69
HOMER3-209ENST00000596482 RBM42Q9BTD8 480 aaKnown RBP25.61■■□□□ 1.69
HOMER3-209ENST00000596482 ZNF831Q5JPB2 1677 aa25.61■■□□□ 1.69
HOMER3-209ENST00000596482 SLC16A10Q8TF71 515 aa25.6■■□□□ 1.69
HOMER3-209ENST00000596482 SLC52A2Q9HAB3 445 aa25.6■■□□□ 1.69
HOMER3-209ENST00000596482 VIRMAQ69YN4 1812 aaKnown RBP25.6■■□□□ 1.69
HOMER3-209ENST00000596482 MSH5O43196 834 aa25.59■■□□□ 1.69
HOMER3-209ENST00000596482 FCHSD2O94868 740 aa25.58■■□□□ 1.69
HOMER3-209ENST00000596482 LINC00116Q8NCU8 138 aa25.58■■□□□ 1.69
HOMER3-209ENST00000596482 LGR6Q9HBX8 967 aa25.58■■□□□ 1.69
HOMER3-209ENST00000596482 GNAT3A8MTJ3 354 aa25.57■■□□□ 1.68
HOMER3-209ENST00000596482 PTGER2P43116 358 aa25.57■■□□□ 1.68
HOMER3-209ENST00000596482 ITPK1Q13572 414 aa25.57■■□□□ 1.68
HOMER3-209ENST00000596482 FLAD1Q8NFF5 587 aa25.57■■□□□ 1.68
HOMER3-209ENST00000596482 MYBBP1AQ9BQG0 1328 aaKnown RBP25.57■■□□□ 1.68
HOMER3-209ENST00000596482 NEFMP07197 916 aa25.55■■□□□ 1.68
HOMER3-209ENST00000596482 PHACTR3Q96KR7 559 aa25.55■■□□□ 1.68
HOMER3-209ENST00000596482 UBR3Q6ZT12 1888 aa25.54■■□□□ 1.68
HOMER3-209ENST00000596482 PTCD1O75127 700 aaKnown RBP25.54■■□□□ 1.68
HOMER3-209ENST00000596482 COL5A3P25940 1745 aaPredicted RBP25.54■■□□□ 1.68
HOMER3-209ENST00000596482 CICQ96RK0 1608 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-209ENST00000596482 PHF14O94880 888 aa25.53■■□□□ 1.68
HOMER3-209ENST00000596482 COL23A1Q86Y22 540 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-209ENST00000596482 GNPATO15228 680 aa25.52■■□□□ 1.68
HOMER3-209ENST00000596482 POLD1P28340 1107 aa25.52■■□□□ 1.68
HOMER3-209ENST00000596482 TEFQ10587 303 aa25.52■■□□□ 1.68
HOMER3-209ENST00000596482 SLC4A9Q96Q91 983 aa25.52■■□□□ 1.68
HOMER3-209ENST00000596482 SSFA2P28290 1259 aa25.51■■□□□ 1.67
HOMER3-209ENST00000596482 SGIP1Q9BQI5 828 aa25.51■■□□□ 1.67
HOMER3-209ENST00000596482 TJP1Q07157 1748 aa25.5■■□□□ 1.67
HOMER3-209ENST00000596482 COL24A1Q17RW2 1714 aa25.49■■□□□ 1.67
HOMER3-209ENST00000596482 CNTNAP4Q9C0A0 1308 aa25.49■■□□□ 1.67
HOMER3-209ENST00000596482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.49■■□□□ 1.67
HOMER3-209ENST00000596482 RTF1Q92541 710 aaKnown RBP25.49■■□□□ 1.67
HOMER3-209ENST00000596482 KCPQ6ZWJ8 1503 aa25.48■■□□□ 1.67
HOMER3-209ENST00000596482 CEMIPQ8WUJ3 1361 aa25.48■■□□□ 1.67
HOMER3-209ENST00000596482 SLC39A6Q13433 755 aa25.48■■□□□ 1.67
HOMER3-209ENST00000596482 TTC5Q8N0Z6 440 aa25.48■■□□□ 1.67
HOMER3-209ENST00000596482 ARXQ96QS3 562 aa25.48■■□□□ 1.67
HOMER3-209ENST00000596482 PNNQ9H307 717 aaKnown RBP25.48■■□□□ 1.67
HOMER3-209ENST00000596482 MAPK8IP3Q9UPT6 1336 aa25.47■■□□□ 1.67
HOMER3-209ENST00000596482 IL17REQ8NFR9 667 aa25.47■■□□□ 1.67
HOMER3-209ENST00000596482 SIPA1L3O60292 1781 aaPredicted RBP25.46■■□□□ 1.67
HOMER3-209ENST00000596482 MSL1Q68DK7 614 aa25.46■■□□□ 1.67
HOMER3-209ENST00000596482 AMIGO3Q86WK7 504 aa25.46■■□□□ 1.67
HOMER3-209ENST00000596482 PRKRIP1Q9H875 184 aaPredicted RBP25.46■■□□□ 1.67
HOMER3-209ENST00000596482 RTCBQ9Y3I0 505 aaKnown RBP25.46■■□□□ 1.67
HOMER3-209ENST00000596482 UBR2Q8IWV8 1755 aa25.46■■□□□ 1.67
HOMER3-209ENST00000596482 ZNF316A6NFI3 1004 aaPredicted RBP25.45■■□□□ 1.66
HOMER3-209ENST00000596482 RC3H1Q5TC82 1133 aaKnown RBP25.45■■□□□ 1.66
HOMER3-209ENST00000596482 FHDC1Q9C0D6 1143 aaPredicted RBP25.44■■□□□ 1.66
HOMER3-209ENST00000596482 SMIM5Q71RC9 77 aa25.43■■□□□ 1.66
HOMER3-209ENST00000596482 HTATSF1O43719 755 aaKnown RBP25.42■■□□□ 1.66
HOMER3-209ENST00000596482 ADRA2BP18089 450 aa25.42■■□□□ 1.66
HOMER3-209ENST00000596482 CRKLP46109 303 aaKnown RBP25.42■■□□□ 1.66
HOMER3-209ENST00000596482 MCM10Q7L590 875 aa25.41■■□□□ 1.66
HOMER3-209ENST00000596482 DNAJC10Q8IXB1 793 aa25.41■■□□□ 1.66
HOMER3-209ENST00000596482 KLHL34Q8N239 644 aa25.41■■□□□ 1.66
HOMER3-209ENST00000596482 PLEKHF1Q96S99 279 aa25.41■■□□□ 1.66
HOMER3-209ENST00000596482 WDR43Q15061 677 aaKnown RBP eCLIP25.4■■□□□ 1.66
HOMER3-209ENST00000596482 TRAPPC3LQ5T215 181 aa25.4■■□□□ 1.66
HOMER3-209ENST00000596482 ZNF790Q6PG37 636 aa25.4■■□□□ 1.66
HOMER3-209ENST00000596482 VSIG10Q8N0Z9 540 aa25.4■■□□□ 1.66
HOMER3-209ENST00000596482 RPS6KA4O75676 772 aa25.39■■□□□ 1.66
HOMER3-209ENST00000596482 DCAF8L1A6NGE4 600 aa25.38■■□□□ 1.65
HOMER3-209ENST00000596482 BTBD11A6QL63 1104 aa25.38■■□□□ 1.65
HOMER3-209ENST00000596482 NFE2L2Q16236 605 aa25.38■■□□□ 1.65
HOMER3-209ENST00000596482 SYT17Q9BSW7 474 aa25.37■■□□□ 1.65
HOMER3-209ENST00000596482 CCDC87Q9NVE4 849 aa25.37■■□□□ 1.65
HOMER3-209ENST00000596482 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
HOMER3-209ENST00000596482 MYH14Q7Z406 1995 aaKnown RBP25.36■■□□□ 1.65
HOMER3-209ENST00000596482 DLG5Q8TDM6 1919 aa25.36■■□□□ 1.65
HOMER3-209ENST00000596482 HEG1Q9ULI3 1381 aa25.36■■□□□ 1.65
HOMER3-209ENST00000596482 RFC4P35249 363 aa25.36■■□□□ 1.65
HOMER3-209ENST00000596482 DCTN1Q14203 1278 aa25.36■■□□□ 1.65
HOMER3-209ENST00000596482 FMNL2Q96PY5 1086 aa25.36■■□□□ 1.65
HOMER3-209ENST00000596482 ZNF496Q96IT1 587 aaPredicted RBP25.35■■□□□ 1.65
HOMER3-209ENST00000596482 CYP19A1P11511 503 aaPredicted RBP25.34■■□□□ 1.65
HOMER3-209ENST00000596482 ARHGEF1Q92888 912 aaKnown RBP25.34■■□□□ 1.65
HOMER3-209ENST00000596482 STARD3NLO95772 234 aa25.33■■□□□ 1.65
HOMER3-209ENST00000596482 INTS5Q6P9B9 1019 aaKnown RBP25.33■■□□□ 1.65
HOMER3-209ENST00000596482 TEX13AQ9BXU3 409 aaPredicted RBP25.32■■□□□ 1.64
HOMER3-209ENST00000596482 SOS1Q07889 1333 aaPredicted RBP25.31■■□□□ 1.64
HOMER3-209ENST00000596482 ZBTB1Q9Y2K1 713 aa25.3■■□□□ 1.64
HOMER3-209ENST00000596482 COL15A1P39059 1388 aa25.3■■□□□ 1.64
HOMER3-209ENST00000596482 LMOD3Q0VAK6 560 aa25.29■■□□□ 1.64
HOMER3-209ENST00000596482 TAF7Q15545 349 aaPredicted RBP25.29■■□□□ 1.64
HOMER3-209ENST00000596482 CCDC146Q8IYE0 955 aa25.29■■□□□ 1.64
HOMER3-209ENST00000596482 NLGN1Q8N2Q7 840 aa25.29■■□□□ 1.64
HOMER3-209ENST00000596482 USP42Q9H9J4 1324 aaKnown RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms