RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 SPNS2Q8IVW8 549 aa11.48□□□□□ -0.57
LINC00347-204ENST00000596240 TESK2Q96S53 571 aa11.48□□□□□ -0.57
LINC00347-204ENST00000596240 USP54Q70EL1 1684 aa11.47□□□□□ -0.57
LINC00347-204ENST00000596240 PPIP5K1Q6PFW1 1433 aa11.47□□□□□ -0.57
LINC00347-204ENST00000596240 MAP3K7O43318 606 aa11.47□□□□□ -0.57
LINC00347-204ENST00000596240 C6orf132Q5T0Z8 1188 aa11.47□□□□□ -0.57
LINC00347-204ENST00000596240 NUDT16Q96DE0 195 aaKnown RBP11.47□□□□□ -0.57
LINC00347-204ENST00000596240 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
LINC00347-204ENST00000596240 CDHR5Q9HBB8 845 aa11.47□□□□□ -0.57
LINC00347-204ENST00000596240 SLIT3O75094 1523 aa11.46□□□□□ -0.57
LINC00347-204ENST00000596240 CENPJQ9HC77 1338 aaPredicted RBP11.46□□□□□ -0.57
LINC00347-204ENST00000596240 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
LINC00347-204ENST00000596240 CENPBP07199 599 aaPredicted RBP11.46□□□□□ -0.57
LINC00347-204ENST00000596240 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.58
LINC00347-204ENST00000596240 LMOD2Q6P5Q4 547 aa11.45□□□□□ -0.58
LINC00347-204ENST00000596240 CDK19Q9BWU1 502 aa11.45□□□□□ -0.58
LINC00347-204ENST00000596240 COL18A1P39060 1754 aa11.45□□□□□ -0.58
LINC00347-204ENST00000596240 SBNO2Q9Y2G9 1366 aa11.44□□□□□ -0.58
LINC00347-204ENST00000596240 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
LINC00347-204ENST00000596240 VPS72Q15906 364 aa11.44□□□□□ -0.58
LINC00347-204ENST00000596240 ZBED2Q9BTP6 218 aa11.44□□□□□ -0.58
LINC00347-204ENST00000596240 RGPD5Q99666 1765 aa11.44□□□□□ -0.58
LINC00347-204ENST00000596240 USP6P35125 1406 aa11.43□□□□□ -0.58
LINC00347-204ENST00000596240 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
LINC00347-204ENST00000596240 KIAA0232Q92628 1395 aa11.43□□□□□ -0.58
LINC00347-204ENST00000596240 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
LINC00347-204ENST00000596240 USP19O94966 1318 aa11.43□□□□□ -0.58
LINC00347-204ENST00000596240 ACEP12821 1306 aa11.43□□□□□ -0.58
LINC00347-204ENST00000596240 ADGRD1Q6QNK2 874 aa11.43□□□□□ -0.58
LINC00347-204ENST00000596240 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
LINC00347-204ENST00000596240 PARP4Q9UKK3 1724 aaKnown RBP11.43□□□□□ -0.58
LINC00347-204ENST00000596240 PLEKHG3A1L390 1219 aa11.42□□□□□ -0.58
LINC00347-204ENST00000596240 PPP1R3GB7ZBB8 358 aa11.42□□□□□ -0.58
LINC00347-204ENST00000596240 PROX2Q3B8N5 592 aa11.42□□□□□ -0.58
LINC00347-204ENST00000596240 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
LINC00347-204ENST00000596240 BLMP54132 1417 aaPredicted RBP11.42□□□□□ -0.58
LINC00347-204ENST00000596240 LRRC37A3O60309 1634 aa11.42□□□□□ -0.58
LINC00347-204ENST00000596240 PRKRIP1Q9H875 184 aaPredicted RBP11.41□□□□□ -0.58
LINC00347-204ENST00000596240 VPS9D1Q9Y2B5 631 aa11.41□□□□□ -0.58
LINC00347-204ENST00000596240 KTN1Q86UP2 1357 aaKnown RBP11.41□□□□□ -0.58
LINC00347-204ENST00000596240 NFAT5O94916 1531 aa11.4□□□□□ -0.58
LINC00347-204ENST00000596240 YTHDC1Q96MU7 727 aaKnown RBP11.4□□□□□ -0.58
LINC00347-204ENST00000596240 BTG4Q9NY30 223 aa11.4□□□□□ -0.58
LINC00347-204ENST00000596240 PEAK1Q9H792 1746 aa11.4□□□□□ -0.58
LINC00347-204ENST00000596240 CPDO75976 1380 aa11.4□□□□□ -0.59
LINC00347-204ENST00000596240 RREB1Q92766 1687 aa11.4□□□□□ -0.59
LINC00347-204ENST00000596240 COL5A2P05997 1499 aaPredicted RBP11.39□□□□□ -0.59
LINC00347-204ENST00000596240 CD163L1Q9NR16 1453 aa11.39□□□□□ -0.59
LINC00347-204ENST00000596240 LTN1O94822 1766 aa11.39□□□□□ -0.59
LINC00347-204ENST00000596240 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
LINC00347-204ENST00000596240 SEPT12Q8IYM1 358 aa11.39□□□□□ -0.59
LINC00347-204ENST00000596240 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
LINC00347-204ENST00000596240 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
LINC00347-204ENST00000596240 SBF2Q86WG5 1849 aa11.38□□□□□ -0.59
LINC00347-204ENST00000596240 HRO43593 1189 aa11.38□□□□□ -0.59
LINC00347-204ENST00000596240 RBM26Q5T8P6 1007 aaKnown RBP11.38□□□□□ -0.59
LINC00347-204ENST00000596240 NUTM2GQ5VZR2 741 aa11.38□□□□□ -0.59
LINC00347-204ENST00000596240 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
LINC00347-204ENST00000596240 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
LINC00347-204ENST00000596240 CPSF1Q10570 1443 aaKnown RBP11.37□□□□□ -0.59
LINC00347-204ENST00000596240 TK2O00142 265 aa11.37□□□□□ -0.59
LINC00347-204ENST00000596240 SRPK2P78362 688 aaKnown RBP11.37□□□□□ -0.59
LINC00347-204ENST00000596240 RALBP1Q15311 655 aa11.37□□□□□ -0.59
LINC00347-204ENST00000596240 CHRNA2Q15822 529 aa11.37□□□□□ -0.59
LINC00347-204ENST00000596240 NPDC1Q9NQX5 325 aaPredicted RBP11.37□□□□□ -0.59
LINC00347-204ENST00000596240 BRD4O60885 1362 aaPredicted RBP11.37□□□□□ -0.59
LINC00347-204ENST00000596240 NUP188Q5SRE5 1749 aa11.37□□□□□ -0.59
LINC00347-204ENST00000596240 EVC2Q86UK5 1308 aa11.36□□□□□ -0.59
LINC00347-204ENST00000596240 ABCC6O95255 1503 aa11.36□□□□□ -0.59
LINC00347-204ENST00000596240 LRP5O75197 1615 aa11.36□□□□□ -0.59
LINC00347-204ENST00000596240 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
LINC00347-204ENST00000596240 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
LINC00347-204ENST00000596240 PANK3Q9H999 370 aa11.36□□□□□ -0.59
LINC00347-204ENST00000596240 SPATA31A1Q5TZJ5 1347 aa11.35□□□□□ -0.59
LINC00347-204ENST00000596240 SLC4A5Q9BY07 1137 aa11.35□□□□□ -0.59
LINC00347-204ENST00000596240 FAM198AQ9UFP1 575 aa11.35□□□□□ -0.59
LINC00347-204ENST00000596240 CCDC9Q9Y3X0 531 aaKnown RBP11.35□□□□□ -0.59
LINC00347-204ENST00000596240 KNSTRNQ9Y448 316 aa11.35□□□□□ -0.59
LINC00347-204ENST00000596240 MYOM1P52179 1685 aa11.35□□□□□ -0.59
LINC00347-204ENST00000596240 DISP2A7MBM2 1401 aa11.35□□□□□ -0.59
LINC00347-204ENST00000596240 RGPD3A6NKT7 1758 aaPredicted RBP11.34□□□□□ -0.59
LINC00347-204ENST00000596240 RGPD4Q7Z3J3 1758 aa11.34□□□□□ -0.59
LINC00347-204ENST00000596240 ZC3H6P61129 1189 aaKnown RBP11.34□□□□□ -0.59
LINC00347-204ENST00000596240 KRT27Q7Z3Y8 459 aa11.34□□□□□ -0.59
LINC00347-204ENST00000596240 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
LINC00347-204ENST00000596240 ABTB2Q8N961 1025 aa11.33□□□□□ -0.6
LINC00347-204ENST00000596240 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
LINC00347-204ENST00000596240 C3orf80F5H4A9 247 aa11.32□□□□□ -0.6
LINC00347-204ENST00000596240 PER1O15534 1290 aaPredicted RBP11.32□□□□□ -0.6
LINC00347-204ENST00000596240 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
LINC00347-204ENST00000596240 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
LINC00347-204ENST00000596240 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
LINC00347-204ENST00000596240 NINLQ9Y2I6 1382 aa11.31□□□□□ -0.6
LINC00347-204ENST00000596240 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
LINC00347-204ENST00000596240 FAM182BQ5T319 152 aa11.31□□□□□ -0.6
LINC00347-204ENST00000596240 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
LINC00347-204ENST00000596240 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
LINC00347-204ENST00000596240 OVOS2A0A0J9YW53 1432 aa11.3□□□□□ -0.6
LINC00347-204ENST00000596240 CRB1P82279 1406 aa11.3□□□□□ -0.6
LINC00347-204ENST00000596240 OVOS2Q6IE36 1432 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms