RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 SMIM5Q71RC9 77 aa21.84■■□□□ 1.09
USHBP1-205ENST00000595993 ASAP1Q9ULH1 1129 aa21.84■■□□□ 1.09
USHBP1-205ENST00000595993 KDRP35968 1356 aa21.84■■□□□ 1.09
USHBP1-205ENST00000595993 EIF4A2Q14240 407 aaKnown RBP21.83■■□□□ 1.09
USHBP1-205ENST00000595993 CICQ96RK0 1608 aaPredicted RBP21.83■■□□□ 1.08
USHBP1-205ENST00000595993 KIF13BQ9NQT8 1826 aa21.83■■□□□ 1.08
USHBP1-205ENST00000595993 IGSF1Q8N6C5 1336 aa21.82■■□□□ 1.08
USHBP1-205ENST00000595993 PHF14O94880 888 aa21.82■■□□□ 1.08
USHBP1-205ENST00000595993 ATG3Q9NT62 314 aa21.82■■□□□ 1.08
USHBP1-205ENST00000595993 KIAA1551Q9HCM1 1747 aa21.82■■□□□ 1.08
USHBP1-205ENST00000595993 COL5A3P25940 1745 aaPredicted RBP21.81■■□□□ 1.08
USHBP1-205ENST00000595993 GNPATO15228 680 aa21.78■■□□□ 1.08
USHBP1-205ENST00000595993 ATP6V1AP38606 617 aa21.78■■□□□ 1.08
USHBP1-205ENST00000595993 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.08
USHBP1-205ENST00000595993 SLC4A9Q96Q91 983 aa21.77■■□□□ 1.08
USHBP1-205ENST00000595993 KDM6AO15550 1401 aaPredicted RBP21.76■■□□□ 1.07
USHBP1-205ENST00000595993 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
USHBP1-205ENST00000595993 PXDNLA1KZ92 1463 aa21.75■■□□□ 1.07
USHBP1-205ENST00000595993 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
USHBP1-205ENST00000595993 TNNT2P45379 298 aaPredicted RBP21.73■■□□□ 1.07
USHBP1-205ENST00000595993 RC3H1Q5TC82 1133 aaKnown RBP21.73■■□□□ 1.07
USHBP1-205ENST00000595993 CNTNAP4Q9C0A0 1308 aa21.73■■□□□ 1.07
USHBP1-205ENST00000595993 C10orf71Q711Q0 1435 aa21.72■■□□□ 1.07
USHBP1-205ENST00000595993 C4AP0C0L4 1744 aa21.72■■□□□ 1.07
USHBP1-205ENST00000595993 PER1O15534 1290 aaPredicted RBP21.72■■□□□ 1.07
USHBP1-205ENST00000595993 HSP90AB1P08238 724 aaKnown RBP21.72■■□□□ 1.07
USHBP1-205ENST00000595993 MMP10P09238 476 aa21.72■■□□□ 1.07
USHBP1-205ENST00000595993 GPBP1L1Q9HC44 474 aaPredicted RBP21.72■■□□□ 1.07
USHBP1-205ENST00000595993 MYH14Q7Z406 1995 aaKnown RBP21.71■■□□□ 1.07
USHBP1-205ENST00000595993 ADRA2BP18089 450 aa21.71■■□□□ 1.07
USHBP1-205ENST00000595993 AMER1Q5JTC6 1135 aaPredicted RBP21.71■■□□□ 1.07
USHBP1-205ENST00000595993 RTCBQ9Y3I0 505 aaKnown RBP21.71■■□□□ 1.07
USHBP1-205ENST00000595993 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
USHBP1-205ENST00000595993 N4BP2Q86UW6 1770 aaPredicted RBP21.7■■□□□ 1.06
USHBP1-205ENST00000595993 PLEKHO1Q53GL0 409 aaPredicted RBP21.7■■□□□ 1.06
USHBP1-205ENST00000595993 NLGN1Q8N2Q7 840 aa21.7■■□□□ 1.06
USHBP1-205ENST00000595993 BRCA1P38398 1863 aaKnown RBP21.7■■□□□ 1.06
USHBP1-205ENST00000595993 AMOTQ4VCS5 1084 aa21.69■■□□□ 1.06
USHBP1-205ENST00000595993 TRAPPC3LQ5T215 181 aa21.69■■□□□ 1.06
USHBP1-205ENST00000595993 TGFB2P61812 414 aa21.68■■□□□ 1.06
USHBP1-205ENST00000595993 TJP1Q07157 1748 aa21.68■■□□□ 1.06
USHBP1-205ENST00000595993 RPS6KA4O75676 772 aa21.67■■□□□ 1.06
USHBP1-205ENST00000595993 GYS1P13807 737 aa21.67■■□□□ 1.06
USHBP1-205ENST00000595993 ZNF530Q6P9A1 599 aaPredicted RBP21.67■■□□□ 1.06
USHBP1-205ENST00000595993 ARHGEF1Q92888 912 aaKnown RBP21.67■■□□□ 1.06
USHBP1-205ENST00000595993 WWC3Q9ULE0 1092 aa21.67■■□□□ 1.06
USHBP1-205ENST00000595993 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
USHBP1-205ENST00000595993 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
USHBP1-205ENST00000595993 ADAMTS7Q9UKP4 1686 aa21.66■■□□□ 1.06
USHBP1-205ENST00000595993 AEBP1Q8IUX7 1158 aa21.65■■□□□ 1.06
USHBP1-205ENST00000595993 KIF3CO14782 793 aa21.64■■□□□ 1.05
USHBP1-205ENST00000595993 HSPA6P17066 643 aa21.64■■□□□ 1.05
USHBP1-205ENST00000595993 CABP4P57796 275 aa21.64■■□□□ 1.05
USHBP1-205ENST00000595993 MORC1Q86VD1 984 aa21.64■■□□□ 1.05
USHBP1-205ENST00000595993 ZNF526Q8TF50 670 aaPredicted RBP21.63■■□□□ 1.05
USHBP1-205ENST00000595993 ARFGEF1Q9Y6D6 1849 aa21.62■■□□□ 1.05
USHBP1-205ENST00000595993 MTHFSP49914 203 aa21.62■■□□□ 1.05
USHBP1-205ENST00000595993 NPC1L1Q9UHC9 1359 aa21.61■■□□□ 1.05
USHBP1-205ENST00000595993 IL13P35225 146 aa21.61■■□□□ 1.05
USHBP1-205ENST00000595993 RFC4P35249 363 aa21.61■■□□□ 1.05
USHBP1-205ENST00000595993 CC2D1BQ5T0F9 858 aaKnown RBP21.61■■□□□ 1.05
USHBP1-205ENST00000595993 CCDC87Q9NVE4 849 aa21.61■■□□□ 1.05
USHBP1-205ENST00000595993 MRC1P22897 1456 aa21.6■■□□□ 1.05
USHBP1-205ENST00000595993 A0A0G2JLW4 131 aa21.6■■□□□ 1.05
USHBP1-205ENST00000595993 C1orf141Q5JVX7 400 aa21.6■■□□□ 1.05
USHBP1-205ENST00000595993 NFATC2IPQ8NCF5 419 aa21.6■■□□□ 1.05
USHBP1-205ENST00000595993 KCNA3P22001 575 aa21.59■■□□□ 1.05
USHBP1-205ENST00000595993 CRKLP46109 303 aaKnown RBP21.59■■□□□ 1.05
USHBP1-205ENST00000595993 SULT6B1Q6IMI4 303 aa21.59■■□□□ 1.05
USHBP1-205ENST00000595993 USP42Q9H9J4 1324 aaKnown RBP21.58■■□□□ 1.05
USHBP1-205ENST00000595993 DPEP1P16444 411 aa21.58■■□□□ 1.05
USHBP1-205ENST00000595993 BCS1LQ9Y276 419 aa21.58■■□□□ 1.05
USHBP1-205ENST00000595993 PARP3Q9Y6F1 533 aa21.58■■□□□ 1.05
USHBP1-205ENST00000595993 PTCD1O75127 700 aaKnown RBP21.57■■□□□ 1.04
USHBP1-205ENST00000595993 CNGB1Q14028 1251 aaPredicted RBP21.57■■□□□ 1.04
USHBP1-205ENST00000595993 VIRMAQ69YN4 1812 aaKnown RBP21.56■■□□□ 1.04
USHBP1-205ENST00000595993 IFFO2Q5TF58 517 aa21.55■■□□□ 1.04
USHBP1-205ENST00000595993 INTS5Q6P9B9 1019 aaKnown RBP21.55■■□□□ 1.04
USHBP1-205ENST00000595993 DDR1Q08345 913 aa21.54■■□□□ 1.04
USHBP1-205ENST00000595993 FKBP8Q14318 412 aa21.54■■□□□ 1.04
USHBP1-205ENST00000595993 AKAP4Q5JQC9 854 aa21.54■■□□□ 1.04
USHBP1-205ENST00000595993 SRP68Q9UHB9 627 aaKnown RBP21.54■■□□□ 1.04
USHBP1-205ENST00000595993 KCPQ6ZWJ8 1503 aa21.53■■□□□ 1.04
USHBP1-205ENST00000595993 FCHSD2O94868 740 aa21.52■■□□□ 1.04
USHBP1-205ENST00000595993 TM4SF1P30408 202 aa21.52■■□□□ 1.04
USHBP1-205ENST00000595993 ARHGAP27Q6ZUM4 889 aa21.52■■□□□ 1.04
USHBP1-205ENST00000595993 SLC52A2Q9HAB3 445 aa21.52■■□□□ 1.04
USHBP1-205ENST00000595993 NRXN2Q9P2S2 1712 aa21.52■■□□□ 1.03
USHBP1-205ENST00000595993 UBR2Q8IWV8 1755 aa21.51■■□□□ 1.03
USHBP1-205ENST00000595993 TOMM70O94826 608 aa21.5■■□□□ 1.03
USHBP1-205ENST00000595993 DDX10Q13206 875 aaKnown RBP21.5■■□□□ 1.03
USHBP1-205ENST00000595993 PIM2Q9P1W9 311 aa21.5■■□□□ 1.03
USHBP1-205ENST00000595993 SOS1Q07889 1333 aaPredicted RBP21.5■■□□□ 1.03
USHBP1-205ENST00000595993 POLRMTO00411 1230 aaKnown RBP21.49■■□□□ 1.03
USHBP1-205ENST00000595993 DNAJC10Q8IXB1 793 aa21.49■■□□□ 1.03
USHBP1-205ENST00000595993 LGR6Q9HBX8 967 aa21.49■■□□□ 1.03
USHBP1-205ENST00000595993 AFDNP55196 1824 aaKnown RBP21.48■■□□□ 1.03
USHBP1-205ENST00000595993 CYP19A1P11511 503 aaPredicted RBP21.48■■□□□ 1.03
USHBP1-205ENST00000595993 DLEC1Q9Y238 1755 aa21.48■■□□□ 1.03
USHBP1-205ENST00000595993 SBF1O95248 1867 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms