RNA–Protein interactions for RNA: ENST00000595984.5

COPE-205, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 434 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-205ENST00000595984 NFATC2IPQ8NCF5 419 aa16.27■□□□□ 0.2
COPE-205ENST00000595984 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.2
COPE-205ENST00000595984 ATG3Q9NT62 314 aa16.27■□□□□ 0.2
COPE-205ENST00000595984 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
COPE-205ENST00000595984 CASZ1Q86V15 1759 aa16.27■□□□□ 0.2
COPE-205ENST00000595984 LRP5O75197 1615 aa16.27■□□□□ 0.19
COPE-205ENST00000595984 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
COPE-205ENST00000595984 CCDC184Q52MB2 194 aa16.25■□□□□ 0.19
COPE-205ENST00000595984 IL17REQ8NFR9 667 aa16.25■□□□□ 0.19
COPE-205ENST00000595984 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
COPE-205ENST00000595984 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
COPE-205ENST00000595984 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
COPE-205ENST00000595984 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
COPE-205ENST00000595984 PNNQ9H307 717 aaKnown RBP16.24■□□□□ 0.19
COPE-205ENST00000595984 STK32BQ9NY57 414 aa16.24■□□□□ 0.19
COPE-205ENST00000595984 TJP1Q07157 1748 aa16.24■□□□□ 0.19
COPE-205ENST00000595984 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
COPE-205ENST00000595984 NEFMP07197 916 aa16.23■□□□□ 0.19
COPE-205ENST00000595984 SIK1P57059 783 aa16.23■□□□□ 0.19
COPE-205ENST00000595984 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
COPE-205ENST00000595984 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
COPE-205ENST00000595984 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
COPE-205ENST00000595984 CICQ96RK0 1608 aaPredicted RBP16.23■□□□□ 0.19
COPE-205ENST00000595984 MAPK8IP3Q9UPT6 1336 aa16.22■□□□□ 0.19
COPE-205ENST00000595984 AKT1S1Q96B36 256 aa16.22■□□□□ 0.19
COPE-205ENST00000595984 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
COPE-205ENST00000595984 UBR3Q6ZT12 1888 aa16.22■□□□□ 0.19
COPE-205ENST00000595984 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
COPE-205ENST00000595984 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.19
COPE-205ENST00000595984 KCPQ6ZWJ8 1503 aa16.2■□□□□ 0.18
COPE-205ENST00000595984 SLC39A6Q13433 755 aa16.2■□□□□ 0.18
COPE-205ENST00000595984 DCTN1Q14203 1278 aa16.2■□□□□ 0.18
COPE-205ENST00000595984 MCM10Q7L590 875 aa16.2■□□□□ 0.18
COPE-205ENST00000595984 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
COPE-205ENST00000595984 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
COPE-205ENST00000595984 HTATSF1O43719 755 aaKnown RBP16.19■□□□□ 0.18
COPE-205ENST00000595984 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
COPE-205ENST00000595984 TEFQ10587 303 aa16.19■□□□□ 0.18
COPE-205ENST00000595984 ITPK1Q13572 414 aa16.19■□□□□ 0.18
COPE-205ENST00000595984 RTF1Q92541 710 aaKnown RBP16.19■□□□□ 0.18
COPE-205ENST00000595984 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
COPE-205ENST00000595984 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
COPE-205ENST00000595984 PTCD1O75127 700 aaKnown RBP16.18■□□□□ 0.18
COPE-205ENST00000595984 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
COPE-205ENST00000595984 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
COPE-205ENST00000595984 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
COPE-205ENST00000595984 MRS2Q9HD23 443 aa16.17■□□□□ 0.18
COPE-205ENST00000595984 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
COPE-205ENST00000595984 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
COPE-205ENST00000595984 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
COPE-205ENST00000595984 RIPK4P57078 832 aa16.15■□□□□ 0.18
COPE-205ENST00000595984 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
COPE-205ENST00000595984 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
COPE-205ENST00000595984 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
COPE-205ENST00000595984 HMGB2P26583 209 aaKnown RBP16.14■□□□□ 0.17
COPE-205ENST00000595984 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
COPE-205ENST00000595984 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
COPE-205ENST00000595984 THUMPD2Q9BTF0 503 aaKnown RBP16.14■□□□□ 0.17
COPE-205ENST00000595984 KCNQ3O43525 872 aa16.13■□□□□ 0.17
COPE-205ENST00000595984 AMIGO3Q86WK7 504 aa16.13■□□□□ 0.17
COPE-205ENST00000595984 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
COPE-205ENST00000595984 AK7Q96M32 723 aa16.13■□□□□ 0.17
COPE-205ENST00000595984 C4AP0C0L4 1744 aa16.12■□□□□ 0.17
COPE-205ENST00000595984 NEUROD2Q15784 382 aa16.12■□□□□ 0.17
COPE-205ENST00000595984 SMIM5Q71RC9 77 aa16.12■□□□□ 0.17
COPE-205ENST00000595984 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
COPE-205ENST00000595984 TAF7Q15545 349 aaPredicted RBP16.11■□□□□ 0.17
COPE-205ENST00000595984 COL23A1Q86Y22 540 aaPredicted RBP16.11■□□□□ 0.17
COPE-205ENST00000595984 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
COPE-205ENST00000595984 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
COPE-205ENST00000595984 CNTNAP4Q9C0A0 1308 aa16.11■□□□□ 0.17
COPE-205ENST00000595984 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
COPE-205ENST00000595984 GNPATO15228 680 aa16.1■□□□□ 0.17
COPE-205ENST00000595984 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
COPE-205ENST00000595984 RC3H1Q5TC82 1133 aaKnown RBP16.1■□□□□ 0.17
COPE-205ENST00000595984 VSIG10Q8N0Z9 540 aa16.1■□□□□ 0.17
COPE-205ENST00000595984 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
COPE-205ENST00000595984 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
COPE-205ENST00000595984 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
COPE-205ENST00000595984 APAF1O14727 1248 aa16.09■□□□□ 0.17
COPE-205ENST00000595984 PHF14O94880 888 aa16.09■□□□□ 0.17
COPE-205ENST00000595984 CRKLP46109 303 aaKnown RBP16.09■□□□□ 0.17
COPE-205ENST00000595984 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
COPE-205ENST00000595984 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.08■□□□□ 0.16
COPE-205ENST00000595984 MSH5O43196 834 aa16.08■□□□□ 0.16
COPE-205ENST00000595984 CYP19A1P11511 503 aaPredicted RBP16.08■□□□□ 0.16
COPE-205ENST00000595984 SSFA2P28290 1259 aa16.08■□□□□ 0.16
COPE-205ENST00000595984 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.16
COPE-205ENST00000595984 MTFR1LQ9H019 292 aa16.08■□□□□ 0.16
COPE-205ENST00000595984 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
COPE-205ENST00000595984 INTS5Q6P9B9 1019 aaKnown RBP16.07■□□□□ 0.16
COPE-205ENST00000595984 FLAD1Q8NFF5 587 aa16.07■□□□□ 0.16
COPE-205ENST00000595984 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
COPE-205ENST00000595984 RPS6KA4O75676 772 aa16.06■□□□□ 0.16
COPE-205ENST00000595984 RTCBQ9Y3I0 505 aaKnown RBP16.06■□□□□ 0.16
COPE-205ENST00000595984 SENP3-EIF4A1A0A087X0R7 540 aa16.05■□□□□ 0.16
COPE-205ENST00000595984 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
COPE-205ENST00000595984 PTGER2P43116 358 aa16.05■□□□□ 0.16
COPE-205ENST00000595984 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
COPE-205ENST00000595984 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 2552.7 ms