RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 MTHFSDQ2M296 383 aaKnown RBP21.19■□□□□ 0.98
ZNF550-207ENST00000595560 SLC16A10Q8TF71 515 aa21.18■□□□□ 0.98
ZNF550-207ENST00000595560 PPP1R1BQ9UD71 204 aaPredicted RBP21.18■□□□□ 0.98
ZNF550-207ENST00000595560 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
ZNF550-207ENST00000595560 COL5A3P25940 1745 aaPredicted RBP21.18■□□□□ 0.98
ZNF550-207ENST00000595560 ATF5Q9Y2D1 282 aaPredicted RBP21.17■□□□□ 0.98
ZNF550-207ENST00000595560 CICQ96RK0 1608 aaPredicted RBP21.17■□□□□ 0.98
ZNF550-207ENST00000595560 SGIP1Q9BQI5 828 aa21.16■□□□□ 0.98
ZNF550-207ENST00000595560 DDX10Q13206 875 aaKnown RBP21.15■□□□□ 0.98
ZNF550-207ENST00000595560 NFATC2IPQ8NCF5 419 aa21.15■□□□□ 0.98
ZNF550-207ENST00000595560 RSPH6AQ9H0K4 717 aa21.15■□□□□ 0.98
ZNF550-207ENST00000595560 ATP6V1AP38606 617 aa21.14■□□□□ 0.97
ZNF550-207ENST00000595560 ITPK1Q13572 414 aa21.14■□□□□ 0.97
ZNF550-207ENST00000595560 LINC00116Q8NCU8 138 aa21.14■□□□□ 0.97
ZNF550-207ENST00000595560 GAS2L2Q8NHY3 880 aa21.14■□□□□ 0.97
ZNF550-207ENST00000595560 MAP3K5Q99683 1374 aa21.13■□□□□ 0.97
ZNF550-207ENST00000595560 RNMTO43148 476 aaKnown RBP21.13■□□□□ 0.97
ZNF550-207ENST00000595560 PRKAR2BP31323 418 aa21.13■□□□□ 0.97
ZNF550-207ENST00000595560 FLAD1Q8NFF5 587 aa21.13■□□□□ 0.97
ZNF550-207ENST00000595560 AK7Q96M32 723 aa21.13■□□□□ 0.97
ZNF550-207ENST00000595560 SLC52A2Q9HAB3 445 aa21.13■□□□□ 0.97
ZNF550-207ENST00000595560 LGR6Q9HBX8 967 aa21.13■□□□□ 0.97
ZNF550-207ENST00000595560 U2AF1L5P0DN76 240 aaPredicted RBP21.12■□□□□ 0.97
ZNF550-207ENST00000595560 U2AF1Q01081 240 aaKnown RBP eCLIP21.12■□□□□ 0.97
ZNF550-207ENST00000595560 RALBP1Q15311 655 aa21.12■□□□□ 0.97
ZNF550-207ENST00000595560 COL23A1Q86Y22 540 aaPredicted RBP21.12■□□□□ 0.97
ZNF550-207ENST00000595560 SIPA1L3O60292 1781 aaPredicted RBP21.12■□□□□ 0.97
ZNF550-207ENST00000595560 TJP1Q07157 1748 aa21.12■□□□□ 0.97
ZNF550-207ENST00000595560 FCHSD2O94868 740 aa21.11■□□□□ 0.97
ZNF550-207ENST00000595560 SLC4A9Q96Q91 983 aa21.11■□□□□ 0.97
ZNF550-207ENST00000595560 RBM42Q9BTD8 480 aaKnown RBP21.11■□□□□ 0.97
ZNF550-207ENST00000595560 UBR2Q8IWV8 1755 aa21.1■□□□□ 0.97
ZNF550-207ENST00000595560 GNAT3A8MTJ3 354 aa21.09■□□□□ 0.97
ZNF550-207ENST00000595560 PHACTR3Q96KR7 559 aa21.09■□□□□ 0.97
ZNF550-207ENST00000595560 MSH5O43196 834 aa21.08■□□□□ 0.97
ZNF550-207ENST00000595560 SSFA2P28290 1259 aa21.08■□□□□ 0.97
ZNF550-207ENST00000595560 AMIGO3Q86WK7 504 aa21.08■□□□□ 0.97
ZNF550-207ENST00000595560 MYH14Q7Z406 1995 aaKnown RBP21.08■□□□□ 0.96
ZNF550-207ENST00000595560 GNPATO15228 680 aa21.07■□□□□ 0.96
ZNF550-207ENST00000595560 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
ZNF550-207ENST00000595560 ARXQ96QS3 562 aa21.07■□□□□ 0.96
ZNF550-207ENST00000595560 KCPQ6ZWJ8 1503 aa21.07■□□□□ 0.96
ZNF550-207ENST00000595560 CNTNAP4Q9C0A0 1308 aa21.06■□□□□ 0.96
ZNF550-207ENST00000595560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.06■□□□□ 0.96
ZNF550-207ENST00000595560 POLD1P28340 1107 aa21.06■□□□□ 0.96
ZNF550-207ENST00000595560 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
ZNF550-207ENST00000595560 PHF14O94880 888 aa21.05■□□□□ 0.96
ZNF550-207ENST00000595560 RC3H1Q5TC82 1133 aaKnown RBP21.05■□□□□ 0.96
ZNF550-207ENST00000595560 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
ZNF550-207ENST00000595560 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
ZNF550-207ENST00000595560 FHDC1Q9C0D6 1143 aaPredicted RBP21.04■□□□□ 0.96
ZNF550-207ENST00000595560 DLG5Q8TDM6 1919 aa21.04■□□□□ 0.96
ZNF550-207ENST00000595560 C4AP0C0L4 1744 aa21.04■□□□□ 0.96
ZNF550-207ENST00000595560 TEFQ10587 303 aa21.03■□□□□ 0.96
ZNF550-207ENST00000595560 SLC39A6Q13433 755 aa21.02■□□□□ 0.96
ZNF550-207ENST00000595560 SMIM5Q71RC9 77 aa21.02■□□□□ 0.96
ZNF550-207ENST00000595560 SYT17Q9BSW7 474 aa21.02■□□□□ 0.96
ZNF550-207ENST00000595560 MSL1Q68DK7 614 aa21.01■□□□□ 0.95
ZNF550-207ENST00000595560 RTCBQ9Y3I0 505 aaKnown RBP21.01■□□□□ 0.95
ZNF550-207ENST00000595560 ADRA2BP18089 450 aa21■□□□□ 0.95
ZNF550-207ENST00000595560 CRKLP46109 303 aaKnown RBP21■□□□□ 0.95
ZNF550-207ENST00000595560 RPS6KA4O75676 772 aa20.99■□□□□ 0.95
ZNF550-207ENST00000595560 NEFMP07197 916 aa20.99■□□□□ 0.95
ZNF550-207ENST00000595560 VSIG10Q8N0Z9 540 aa20.99■□□□□ 0.95
ZNF550-207ENST00000595560 PLEKHF1Q96S99 279 aa20.99■□□□□ 0.95
ZNF550-207ENST00000595560 HTATSF1O43719 755 aaKnown RBP20.98■□□□□ 0.95
ZNF550-207ENST00000595560 TTC5Q8N0Z6 440 aa20.98■□□□□ 0.95
ZNF550-207ENST00000595560 RTF1Q92541 710 aaKnown RBP20.98■□□□□ 0.95
ZNF550-207ENST00000595560 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
ZNF550-207ENST00000595560 ZNF790Q6PG37 636 aa20.97■□□□□ 0.95
ZNF550-207ENST00000595560 PNNQ9H307 717 aaKnown RBP20.97■□□□□ 0.95
ZNF550-207ENST00000595560 PRKRIP1Q9H875 184 aaPredicted RBP20.97■□□□□ 0.95
ZNF550-207ENST00000595560 DNAJC10Q8IXB1 793 aa20.96■□□□□ 0.95
ZNF550-207ENST00000595560 INTS5Q6P9B9 1019 aaKnown RBP20.95■□□□□ 0.94
ZNF550-207ENST00000595560 MCM10Q7L590 875 aa20.95■□□□□ 0.94
ZNF550-207ENST00000595560 ARHGEF1Q92888 912 aaKnown RBP20.95■□□□□ 0.94
ZNF550-207ENST00000595560 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
ZNF550-207ENST00000595560 CCDC87Q9NVE4 849 aa20.94■□□□□ 0.94
ZNF550-207ENST00000595560 DCAF8L1A6NGE4 600 aa20.93■□□□□ 0.94
ZNF550-207ENST00000595560 BTBD11A6QL63 1104 aa20.93■□□□□ 0.94
ZNF550-207ENST00000595560 ZNF496Q96IT1 587 aaPredicted RBP20.93■□□□□ 0.94
ZNF550-207ENST00000595560 MAPK8IP3Q9UPT6 1336 aa20.93■□□□□ 0.94
ZNF550-207ENST00000595560 HEG1Q9ULI3 1381 aa20.93■□□□□ 0.94
ZNF550-207ENST00000595560 RFC4P35249 363 aa20.92■□□□□ 0.94
ZNF550-207ENST00000595560 NFE2L2Q16236 605 aa20.92■□□□□ 0.94
ZNF550-207ENST00000595560 KLHL34Q8N239 644 aa20.92■□□□□ 0.94
ZNF550-207ENST00000595560 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
ZNF550-207ENST00000595560 FMNL2Q96PY5 1086 aa20.91■□□□□ 0.94
ZNF550-207ENST00000595560 SOS1Q07889 1333 aaPredicted RBP20.9■□□□□ 0.94
ZNF550-207ENST00000595560 ZNF316A6NFI3 1004 aaPredicted RBP20.9■□□□□ 0.94
ZNF550-207ENST00000595560 GYS1P13807 737 aa20.9■□□□□ 0.94
ZNF550-207ENST00000595560 NLGN1Q8N2Q7 840 aa20.9■□□□□ 0.94
ZNF550-207ENST00000595560 KIF13BQ9NQT8 1826 aa20.9■□□□□ 0.94
ZNF550-207ENST00000595560 KDM3BQ7LBC6 1761 aa20.9■□□□□ 0.94
ZNF550-207ENST00000595560 USP42Q9H9J4 1324 aaKnown RBP20.89■□□□□ 0.93
ZNF550-207ENST00000595560 STARD3NLO95772 234 aa20.89■□□□□ 0.93
ZNF550-207ENST00000595560 TEX13AQ9BXU3 409 aaPredicted RBP20.89■□□□□ 0.93
ZNF550-207ENST00000595560 CD2APQ9Y5K6 639 aa20.89■□□□□ 0.93
ZNF550-207ENST00000595560 NLGN2Q8NFZ4 835 aa20.88■□□□□ 0.93
ZNF550-207ENST00000595560 ZBTB1Q9Y2K1 713 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms