RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 NEK11Q8NG66 645 aa14.51□□□□□ -0.09
LIG1-207ENST00000594759 KLHL34Q8N239 644 aa14.51□□□□□ -0.09
LIG1-207ENST00000594759 NOC3LQ8WTT2 800 aaKnown RBP14.51□□□□□ -0.09
LIG1-207ENST00000594759 ZSCAN26Q16670 478 aa14.51□□□□□ -0.09
LIG1-207ENST00000594759 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
LIG1-207ENST00000594759 PYCARDQ9ULZ3 195 aa14.51□□□□□ -0.09
LIG1-207ENST00000594759 KIAA1524Q8TCG1 905 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 ZNF521Q96K83 1311 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 PZPP20742 1482 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 INSRP06213 1382 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 ZNF165P49910 485 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 CT47A1Q5JQC4 288 aaPredicted RBP14.5□□□□□ -0.09
LIG1-207ENST00000594759 ERCC4Q92889 916 aaPredicted RBP14.5□□□□□ -0.09
LIG1-207ENST00000594759 ERLIN1O75477 346 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 CAPN2P17655 700 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 CEBPAP49715 358 aaPredicted RBP14.5□□□□□ -0.09
LIG1-207ENST00000594759 SDF4Q9BRK5 362 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 CNPY2Q9Y2B0 182 aa14.5□□□□□ -0.09
LIG1-207ENST00000594759 SMARCA5O60264 1052 aaPredicted RBP14.49□□□□□ -0.09
LIG1-207ENST00000594759 NCBP1Q09161 790 aaKnown RBP14.49□□□□□ -0.09
LIG1-207ENST00000594759 TRMT2AQ8IZ69 625 aaKnown RBP14.49□□□□□ -0.09
LIG1-207ENST00000594759 CTNNA3Q9UI47 895 aa14.49□□□□□ -0.09
LIG1-207ENST00000594759 CASQ1P31415 396 aa14.48□□□□□ -0.09
LIG1-207ENST00000594759 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIG1-207ENST00000594759 ZNF215Q9UL58 517 aaPredicted RBP14.48□□□□□ -0.09
LIG1-207ENST00000594759 CSB-PGBD3P0DP91 1061 aa14.48□□□□□ -0.09
LIG1-207ENST00000594759 ZKSCAN1P17029 563 aaPredicted RBP14.48□□□□□ -0.09
LIG1-207ENST00000594759 ZNF622Q969S3 477 aaKnown RBP eCLIP14.48□□□□□ -0.097e-7■■□□□ 12.2
LIG1-207ENST00000594759 ARFGAP3Q9NP61 516 aa14.48□□□□□ -0.09
LIG1-207ENST00000594759 SFPQP23246 707 aaKnown RBP eCLIP14.47□□□□□ -0.09
LIG1-207ENST00000594759 TMPOP42166 694 aaKnown RBP14.47□□□□□ -0.09
LIG1-207ENST00000594759 ANKRD20A12PQ8NF67 263 aa14.47□□□□□ -0.09
LIG1-207ENST00000594759 PDCP20941 246 aa14.47□□□□□ -0.09
LIG1-207ENST00000594759 KINO60870 393 aaKnown RBP14.47□□□□□ -0.09
LIG1-207ENST00000594759 LARP1BQ659C4 914 aaKnown RBP14.47□□□□□ -0.09
LIG1-207ENST00000594759 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.47□□□□□ -0.09
LIG1-207ENST00000594759 NOS1P29475 1434 aa14.47□□□□□ -0.09
LIG1-207ENST00000594759 NECTIN2Q92692 538 aa14.47□□□□□ -0.09
LIG1-207ENST00000594759 LOC102724159A0A0B4J2E5 919 aa14.46□□□□□ -0.09
LIG1-207ENST00000594759 GADD45BO75293 160 aaPredicted RBP14.46□□□□□ -0.09
LIG1-207ENST00000594759 PWP2Q15269 919 aaKnown RBP14.46□□□□□ -0.09
LIG1-207ENST00000594759 FERMT3Q86UX7 667 aa14.46□□□□□ -0.09
LIG1-207ENST00000594759 SPATA32Q96LK8 384 aa14.46□□□□□ -0.09
LIG1-207ENST00000594759 FAM107BQ9H098 131 aa14.46□□□□□ -0.09
LIG1-207ENST00000594759 KIAA0754O94854 1291 aa14.46□□□□□ -0.09
LIG1-207ENST00000594759 CASTP20810 708 aaKnown RBP14.46□□□□□ -0.09
LIG1-207ENST00000594759 IBSPP21815 317 aaPredicted RBP14.46□□□□□ -0.09
LIG1-207ENST00000594759 MICALL1Q8N3F8 863 aa14.46□□□□□ -0.09
LIG1-207ENST00000594759 CCDC34Q96HJ3 373 aa14.46□□□□□ -0.09
LIG1-207ENST00000594759 ZBTB40Q9NUA8 1239 aa14.46□□□□□ -0.09
LIG1-207ENST00000594759 SYCP1Q15431 976 aa14.46□□□□□ -0.1
LIG1-207ENST00000594759 CHMP4CQ96CF2 233 aa14.46□□□□□ -0.1
LIG1-207ENST00000594759 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 STX6O43752 255 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 DHX8Q14562 1220 aaKnown RBP14.45□□□□□ -0.1
LIG1-207ENST00000594759 KDM6BO15054 1643 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 ITSN2Q9NZM3 1697 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 RAD51AP2Q09MP3 1159 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 ICE2Q659A1 982 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 LUZP1Q86V48 1076 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 PDILTQ8N807 584 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 LARP6Q9BRS8 491 aaKnown RBP14.45□□□□□ -0.1
LIG1-207ENST00000594759 USP26Q9BXU7 913 aa14.45□□□□□ -0.1
LIG1-207ENST00000594759 MORC2Q9Y6X9 1032 aaPredicted RBP14.45□□□□□ -0.1
LIG1-207ENST00000594759 SLFN14P0C7P3 912 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 FBLN1P23142 703 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 ANO6Q4KMQ2 910 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 PRKAR2BP31323 418 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 GNAI1P63096 354 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 BCORL1Q5H9F3 1711 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 CDR1P51861 262 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 LRMPQ12912 555 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
LIG1-207ENST00000594759 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
LIG1-207ENST00000594759 NSFL1CQ9UNZ2 370 aaKnown RBP14.44□□□□□ -0.1
LIG1-207ENST00000594759 DNMT1P26358 1616 aaKnown RBP14.43□□□□□ -0.1
LIG1-207ENST00000594759 JRKLQ9Y4A0 524 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 NSD3Q9BZ95 1437 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 CEBPZQ03701 1054 aaKnown RBP14.43□□□□□ -0.1
LIG1-207ENST00000594759 NAA30Q147X3 362 aaPredicted RBP14.43□□□□□ -0.1
LIG1-207ENST00000594759 TWISTNBQ3B726 338 aaPredicted RBP14.43□□□□□ -0.1
LIG1-207ENST00000594759 C16orf71Q8IYS4 520 aaPredicted RBP14.43□□□□□ -0.1
LIG1-207ENST00000594759 CENPHQ9H3R5 247 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 ZSCAN22P10073 491 aaPredicted RBP14.43□□□□□ -0.1
LIG1-207ENST00000594759 MCM6Q14566 821 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 CEP57L1Q8IYX8 460 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 RGS22Q8NE09 1264 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 RUFY2Q8WXA3 655 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 DNAI1Q9UI46 699 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 MAP2K2P36507 400 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 GSDMDP57764 484 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 NLRP6P59044 892 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 PPM1EQ8WY54 764 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 ANKRD7Q92527 254 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 UHRF1BP1Q6BDS2 1440 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 WDR7Q9Y4E6 1490 aa14.43□□□□□ -0.1
LIG1-207ENST00000594759 RPGRIP1LQ68CZ1 1315 aa14.42□□□□□ -0.1
LIG1-207ENST00000594759 SDSP20132 328 aa14.42□□□□□ -0.1
LIG1-207ENST00000594759 TYRO3Q06418 890 aa14.42□□□□□ -0.1
LIG1-207ENST00000594759 RRS1Q15050 365 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms