RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 GPR162Q16538 588 aa21.34■■□□□ 1.01
USHBP1-204ENST00000594190 PIGBQ92521 554 aa21.34■■□□□ 1.01
USHBP1-204ENST00000594190 COL3A1P02461 1466 aaPredicted RBP21.33■■□□□ 1.01
USHBP1-204ENST00000594190 MPRIPQ6WCQ1 1025 aa21.33■■□□□ 1.01
USHBP1-204ENST00000594190 TFCP2L1Q9NZI6 479 aa21.33■■□□□ 1.01
USHBP1-204ENST00000594190 SPG7Q9UQ90 795 aa21.33■■□□□ 1.01
USHBP1-204ENST00000594190 PHKG2P15735 406 aa21.32■■□□□ 1
USHBP1-204ENST00000594190 COL23A1Q86Y22 540 aaPredicted RBP21.32■■□□□ 1
USHBP1-204ENST00000594190 NGEFQ8N5V2 710 aa21.32■■□□□ 1
USHBP1-204ENST00000594190 ADAMTS8Q9UP79 889 aa21.32■■□□□ 1
USHBP1-204ENST00000594190 DIAPH1O60610 1272 aaKnown RBP21.3■■□□□ 1
USHBP1-204ENST00000594190 POLD1P28340 1107 aa21.3■■□□□ 1
USHBP1-204ENST00000594190 AMIGO3Q86WK7 504 aa21.3■■□□□ 1
USHBP1-204ENST00000594190 KLHL34Q8N239 644 aa21.3■■□□□ 1
USHBP1-204ENST00000594190 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
USHBP1-204ENST00000594190 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
USHBP1-204ENST00000594190 IFNL2Q8IZJ0 200 aa21.29■■□□□ 1
USHBP1-204ENST00000594190 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
USHBP1-204ENST00000594190 KDRP35968 1356 aa21.27■■□□□ 1
USHBP1-204ENST00000594190 PELP1Q8IZL8 1130 aaKnown RBP21.27■■□□□ 1
USHBP1-204ENST00000594190 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
USHBP1-204ENST00000594190 SCN11AQ9UI33 1791 aa21.27■■□□□ 1
USHBP1-204ENST00000594190 KDM6AO15550 1401 aaPredicted RBP21.27■■□□□ 1
USHBP1-204ENST00000594190 NCBP3Q53F19 620 aaKnown RBP21.25■□□□□ 0.99
USHBP1-204ENST00000594190 ASAP1Q9ULH1 1129 aa21.25■□□□□ 0.99
USHBP1-204ENST00000594190 CICQ96RK0 1608 aaPredicted RBP21.25■□□□□ 0.99
USHBP1-204ENST00000594190 GIGYF1O75420 1035 aaPredicted RBP21.24■□□□□ 0.99
USHBP1-204ENST00000594190 IL13P35225 146 aa21.24■□□□□ 0.99
USHBP1-204ENST00000594190 ATG3Q9NT62 314 aa21.24■□□□□ 0.99
USHBP1-204ENST00000594190 MYH14Q7Z406 1995 aaKnown RBP21.23■□□□□ 0.99
USHBP1-204ENST00000594190 LOC102724428A0A0B4J2F2 783 aa21.23■□□□□ 0.99
USHBP1-204ENST00000594190 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
USHBP1-204ENST00000594190 SIK1P57059 783 aa21.23■□□□□ 0.99
USHBP1-204ENST00000594190 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
USHBP1-204ENST00000594190 AEBP1Q8IUX7 1158 aa21.23■□□□□ 0.99
USHBP1-204ENST00000594190 LINC00116Q8NCU8 138 aa21.23■□□□□ 0.99
USHBP1-204ENST00000594190 ITPK1Q13572 414 aa21.22■□□□□ 0.99
USHBP1-204ENST00000594190 RUNDC1Q96C34 613 aa21.22■□□□□ 0.99
USHBP1-204ENST00000594190 TMOD3Q9NYL9 352 aa21.22■□□□□ 0.99
USHBP1-204ENST00000594190 ADAMTS7Q9UKP4 1686 aa21.21■□□□□ 0.99
USHBP1-204ENST00000594190 HMGB2P26583 209 aaKnown RBP21.21■□□□□ 0.99
USHBP1-204ENST00000594190 SLC4A9Q96Q91 983 aa21.21■□□□□ 0.99
USHBP1-204ENST00000594190 ERVV-2B6SEH9 535 aa21.2■□□□□ 0.98
USHBP1-204ENST00000594190 FLAD1Q8NFF5 587 aa21.2■□□□□ 0.98
USHBP1-204ENST00000594190 NLGN2Q8NFZ4 835 aa21.2■□□□□ 0.98
USHBP1-204ENST00000594190 U2SURPO15042 1029 aaKnown RBP21.19■□□□□ 0.98
USHBP1-204ENST00000594190 FCHSD2O94868 740 aa21.19■□□□□ 0.98
USHBP1-204ENST00000594190 SMIM5Q71RC9 77 aa21.19■□□□□ 0.98
USHBP1-204ENST00000594190 DCAF5Q96JK2 942 aa21.19■□□□□ 0.98
USHBP1-204ENST00000594190 KIF13BQ9NQT8 1826 aa21.18■□□□□ 0.98
USHBP1-204ENST00000594190 NEFMP07197 916 aa21.18■□□□□ 0.98
USHBP1-204ENST00000594190 AMOTQ4VCS5 1084 aa21.18■□□□□ 0.98
USHBP1-204ENST00000594190 PLEKHO1Q53GL0 409 aaPredicted RBP21.18■□□□□ 0.98
USHBP1-204ENST00000594190 TJP1Q07157 1748 aa21.18■□□□□ 0.98
USHBP1-204ENST00000594190 SSFA2P28290 1259 aa21.17■□□□□ 0.98
USHBP1-204ENST00000594190 MSL1Q68DK7 614 aa21.17■□□□□ 0.98
USHBP1-204ENST00000594190 C4AP0C0L4 1744 aa21.17■□□□□ 0.98
USHBP1-204ENST00000594190 KIAA1551Q9HCM1 1747 aa21.16■□□□□ 0.98
USHBP1-204ENST00000594190 GRIN3BO60391 1043 aa21.16■□□□□ 0.98
USHBP1-204ENST00000594190 HSP90AB1P08238 724 aaKnown RBP21.16■□□□□ 0.98
USHBP1-204ENST00000594190 AK7Q96M32 723 aa21.16■□□□□ 0.98
USHBP1-204ENST00000594190 MRC1P22897 1456 aa21.15■□□□□ 0.98
USHBP1-204ENST00000594190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.15■□□□□ 0.98
USHBP1-204ENST00000594190 MSH5O43196 834 aa21.15■□□□□ 0.98
USHBP1-204ENST00000594190 SULT6B1Q6IMI4 303 aa21.15■□□□□ 0.98
USHBP1-204ENST00000594190 ZNF530Q6P9A1 599 aaPredicted RBP21.15■□□□□ 0.98
USHBP1-204ENST00000594190 MAPK8IP3Q9UPT6 1336 aa21.14■□□□□ 0.97
USHBP1-204ENST00000594190 ATP6V1AP38606 617 aa21.14■□□□□ 0.97
USHBP1-204ENST00000594190 APAF1O14727 1248 aa21.12■□□□□ 0.97
USHBP1-204ENST00000594190 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
USHBP1-204ENST00000594190 YBX3P16989 372 aaKnown RBP eCLIP21.11■□□□□ 0.97
USHBP1-204ENST00000594190 CCDC27Q2M243 656 aa21.11■□□□□ 0.97
USHBP1-204ENST00000594190 IFFO2Q5TF58 517 aa21.11■□□□□ 0.97
USHBP1-204ENST00000594190 CD2APQ9Y5K6 639 aa21.11■□□□□ 0.97
USHBP1-204ENST00000594190 PHF14O94880 888 aa21.1■□□□□ 0.97
USHBP1-204ENST00000594190 PLEKHF1Q96S99 279 aa21.1■□□□□ 0.97
USHBP1-204ENST00000594190 RSPH6AQ9H0K4 717 aa21.1■□□□□ 0.97
USHBP1-204ENST00000594190 UBR2Q8IWV8 1755 aa21.1■□□□□ 0.97
USHBP1-204ENST00000594190 CNTNAP4Q9C0A0 1308 aa21.09■□□□□ 0.97
USHBP1-204ENST00000594190 RC3H1Q5TC82 1133 aaKnown RBP21.09■□□□□ 0.97
USHBP1-204ENST00000594190 ZNF521Q96K83 1311 aa21.08■□□□□ 0.97
USHBP1-204ENST00000594190 SIPA1L3O60292 1781 aaPredicted RBP21.08■□□□□ 0.97
USHBP1-204ENST00000594190 GNPATO15228 680 aa21.08■□□□□ 0.97
USHBP1-204ENST00000594190 BRCA1P38398 1863 aaKnown RBP21.07■□□□□ 0.96
USHBP1-204ENST00000594190 CABP4P57796 275 aa21.07■□□□□ 0.96
USHBP1-204ENST00000594190 AKAP4Q5JQC9 854 aa21.07■□□□□ 0.96
USHBP1-204ENST00000594190 NFATC2IPQ8NCF5 419 aa21.07■□□□□ 0.96
USHBP1-204ENST00000594190 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
USHBP1-204ENST00000594190 C1orf141Q5JVX7 400 aa21.06■□□□□ 0.96
USHBP1-204ENST00000594190 KCPQ6ZWJ8 1503 aa21.05■□□□□ 0.96
USHBP1-204ENST00000594190 GOLGA2Q08379 1002 aa21.04■□□□□ 0.96
USHBP1-204ENST00000594190 RBM42Q9BTD8 480 aaKnown RBP21.04■□□□□ 0.96
USHBP1-204ENST00000594190 LGR6Q9HBX8 967 aa21.04■□□□□ 0.96
USHBP1-204ENST00000594190 N4BP2Q86UW6 1770 aaPredicted RBP21.04■□□□□ 0.96
USHBP1-204ENST00000594190 RPS6KA4O75676 772 aa21.03■□□□□ 0.96
USHBP1-204ENST00000594190 HMOX1P09601 288 aa21.03■□□□□ 0.96
USHBP1-204ENST00000594190 ADRA2BP18089 450 aa21.03■□□□□ 0.96
USHBP1-204ENST00000594190 TMPOP42166 694 aaKnown RBP21.03■□□□□ 0.96
USHBP1-204ENST00000594190 WDR63Q8IWG1 891 aa21.03■□□□□ 0.96
USHBP1-204ENST00000594190 ARHGEF1Q92888 912 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms