RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 RASSF10A6NK89 507 aa17.24■□□□□ 0.35
ZNF558-202ENST00000593891 TRAPPC3LQ5T215 181 aa17.24■□□□□ 0.35
ZNF558-202ENST00000593891 LTV1Q96GA3 475 aaPredicted RBP17.24■□□□□ 0.35
ZNF558-202ENST00000593891 ARFGEF1Q9Y6D6 1849 aa17.24■□□□□ 0.35
ZNF558-202ENST00000593891 LINC00116Q8NCU8 138 aa17.23■□□□□ 0.35
ZNF558-202ENST00000593891 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
ZNF558-202ENST00000593891 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
ZNF558-202ENST00000593891 POTEJP0CG39 1038 aa17.22■□□□□ 0.35
ZNF558-202ENST00000593891 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
ZNF558-202ENST00000593891 TAF1LQ8IZX4 1826 aa17.2■□□□□ 0.34
ZNF558-202ENST00000593891 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
ZNF558-202ENST00000593891 CHRNA5P30532 468 aa17.2■□□□□ 0.34
ZNF558-202ENST00000593891 SIK1P57059 783 aa17.2■□□□□ 0.34
ZNF558-202ENST00000593891 DGKZQ13574 1117 aa17.2■□□□□ 0.34
ZNF558-202ENST00000593891 LDHDQ86WU2 507 aa17.2■□□□□ 0.34
ZNF558-202ENST00000593891 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
ZNF558-202ENST00000593891 IP6K1Q92551 441 aa17.19■□□□□ 0.34
ZNF558-202ENST00000593891 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
ZNF558-202ENST00000593891 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
ZNF558-202ENST00000593891 BRCA1P38398 1863 aaKnown RBP17.18■□□□□ 0.34
ZNF558-202ENST00000593891 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
ZNF558-202ENST00000593891 SBF1O95248 1867 aa17.17■□□□□ 0.34
ZNF558-202ENST00000593891 GYS1P13807 737 aa17.17■□□□□ 0.34
ZNF558-202ENST00000593891 ABT1Q9ULW3 272 aaKnown RBP17.17■□□□□ 0.34
ZNF558-202ENST00000593891 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
ZNF558-202ENST00000593891 ITGBL1O95965 494 aaPredicted RBP17.16■□□□□ 0.34
ZNF558-202ENST00000593891 RFC4P35249 363 aa17.16■□□□□ 0.34
ZNF558-202ENST00000593891 SOX10P56693 466 aa17.16■□□□□ 0.34
ZNF558-202ENST00000593891 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
ZNF558-202ENST00000593891 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
ZNF558-202ENST00000593891 IQCA1LA6NCM1 817 aa17.15■□□□□ 0.34
ZNF558-202ENST00000593891 ATP6V1AP38606 617 aa17.15■□□□□ 0.34
ZNF558-202ENST00000593891 ECE1P42892 770 aa17.15■□□□□ 0.34
ZNF558-202ENST00000593891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
ZNF558-202ENST00000593891 TSKSQ9UJT2 592 aa17.15■□□□□ 0.34
ZNF558-202ENST00000593891 C4AP0C0L4 1744 aa17.14■□□□□ 0.33
ZNF558-202ENST00000593891 ADRA2BP18089 450 aa17.14■□□□□ 0.33
ZNF558-202ENST00000593891 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
ZNF558-202ENST00000593891 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
ZNF558-202ENST00000593891 MEGF6O75095 1541 aa17.13■□□□□ 0.33
ZNF558-202ENST00000593891 CA12O43570 354 aa17.13■□□□□ 0.33
ZNF558-202ENST00000593891 ITPK1Q13572 414 aa17.13■□□□□ 0.33
ZNF558-202ENST00000593891 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
ZNF558-202ENST00000593891 PAXIP1Q6ZW49 1069 aaPredicted RBP17.13■□□□□ 0.33
ZNF558-202ENST00000593891 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
ZNF558-202ENST00000593891 PIGBQ92521 554 aa17.13■□□□□ 0.33
ZNF558-202ENST00000593891 GPR101Q96P66 508 aaPredicted RBP17.13■□□□□ 0.33
ZNF558-202ENST00000593891 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
ZNF558-202ENST00000593891 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
ZNF558-202ENST00000593891 DLL1O00548 723 aa17.12■□□□□ 0.33
ZNF558-202ENST00000593891 HABP4Q5JVS0 413 aaKnown RBP17.12■□□□□ 0.33
ZNF558-202ENST00000593891 CAPNS2Q96L46 248 aa17.12■□□□□ 0.33
ZNF558-202ENST00000593891 EVC2Q86UK5 1308 aa17.12■□□□□ 0.33
ZNF558-202ENST00000593891 NBPF1Q3BBV0 1214 aa17.11■□□□□ 0.33
ZNF558-202ENST00000593891 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
ZNF558-202ENST00000593891 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
ZNF558-202ENST00000593891 DDNO94850 711 aaPredicted RBP17.1■□□□□ 0.33
ZNF558-202ENST00000593891 TATP17735 454 aaPredicted RBP17.1■□□□□ 0.33
ZNF558-202ENST00000593891 GRM1Q13255 1194 aa17.1■□□□□ 0.33
ZNF558-202ENST00000593891 NME9Q86XW9 330 aa17.1■□□□□ 0.33
ZNF558-202ENST00000593891 NFKBIEO00221 500 aa17.09■□□□□ 0.33
ZNF558-202ENST00000593891 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
ZNF558-202ENST00000593891 TAF1DQ9H5J8 278 aaPredicted RBP17.09■□□□□ 0.33
ZNF558-202ENST00000593891 TTLL6Q8N841 843 aa17.08■□□□□ 0.32
ZNF558-202ENST00000593891 MAP2K2P36507 400 aa17.07■□□□□ 0.32
ZNF558-202ENST00000593891 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
ZNF558-202ENST00000593891 FAM208AQ9UK61 1670 aaKnown RBP17.06■□□□□ 0.32
ZNF558-202ENST00000593891 LTN1O94822 1766 aa17.05■□□□□ 0.32
ZNF558-202ENST00000593891 RPS6KA4O75676 772 aa17.05■□□□□ 0.32
ZNF558-202ENST00000593891 DDR1Q08345 913 aa17.05■□□□□ 0.32
ZNF558-202ENST00000593891 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
ZNF558-202ENST00000593891 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
ZNF558-202ENST00000593891 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
ZNF558-202ENST00000593891 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
ZNF558-202ENST00000593891 AMPHP49418 695 aa17.04■□□□□ 0.32
ZNF558-202ENST00000593891 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
ZNF558-202ENST00000593891 CYP27B1O15528 508 aa17.03■□□□□ 0.32
ZNF558-202ENST00000593891 HOXC9P31274 260 aa17.03■□□□□ 0.32
ZNF558-202ENST00000593891 NBPF6Q5VWK0 638 aa17.03■□□□□ 0.32
ZNF558-202ENST00000593891 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
ZNF558-202ENST00000593891 NBPF4Q96M43 638 aa17.03■□□□□ 0.32
ZNF558-202ENST00000593891 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
ZNF558-202ENST00000593891 FKBP8Q14318 412 aa17.02■□□□□ 0.32
ZNF558-202ENST00000593891 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
ZNF558-202ENST00000593891 MAP1SQ66K74 1059 aaPredicted RBP17.01■□□□□ 0.31
ZNF558-202ENST00000593891 PNMA8AQ86V59 439 aaPredicted RBP17.01■□□□□ 0.31
ZNF558-202ENST00000593891 DDX21Q9NR30 783 aaKnown RBP eCLIP17■□□□□ 0.31
ZNF558-202ENST00000593891 HACL1Q9UJ83 578 aa17■□□□□ 0.31
ZNF558-202ENST00000593891 MAP3K19Q56UN5 1328 aa16.99■□□□□ 0.31
ZNF558-202ENST00000593891 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
ZNF558-202ENST00000593891 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
ZNF558-202ENST00000593891 CNTNAP4Q9C0A0 1308 aa16.98■□□□□ 0.31
ZNF558-202ENST00000593891 H0YIN7 160 aa16.98■□□□□ 0.31
ZNF558-202ENST00000593891 AOC2O75106 756 aa16.98■□□□□ 0.31
ZNF558-202ENST00000593891 EPHX2P34913 555 aa16.98■□□□□ 0.31
ZNF558-202ENST00000593891 C2CD5Q86YS7 1000 aa16.98■□□□□ 0.31
ZNF558-202ENST00000593891 THSD7BQ9C0I4 1608 aa16.97■□□□□ 0.31
ZNF558-202ENST00000593891 BRPF1P55201 1214 aaPredicted RBP16.97■□□□□ 0.31
ZNF558-202ENST00000593891 NKX1-1Q15270 411 aaPredicted RBP16.97■□□□□ 0.31
ZNF558-202ENST00000593891 ATG3Q9NT62 314 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms