RNA–Protein interactions for RNA: ENST00000593261.1

NEK8-208, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-208ENST00000593261 USP31Q70CQ4 1352 aa8.1□□□□□ -1.11
NEK8-208ENST00000593261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.1□□□□□ -1.11
NEK8-208ENST00000593261 SLC34A2O95436 690 aa8.1□□□□□ -1.11
NEK8-208ENST00000593261 HSPA1AP0DMV8 641 aaKnown RBP8.1□□□□□ -1.11
NEK8-208ENST00000593261 HSPA1BP0DMV9 641 aaKnown RBP8.1□□□□□ -1.11
NEK8-208ENST00000593261 RBM46Q8TBY0 533 aaKnown RBP8.1□□□□□ -1.11
NEK8-208ENST00000593261 ZNF692Q9BU19 519 aaPredicted RBP8.1□□□□□ -1.11
NEK8-208ENST00000593261 MAP2P11137 1827 aaKnown RBP8.1□□□□□ -1.11
NEK8-208ENST00000593261 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
NEK8-208ENST00000593261 TMF1P82094 1093 aa8.09□□□□□ -1.11
NEK8-208ENST00000593261 ARHGAP27Q6ZUM4 889 aa8.09□□□□□ -1.11
NEK8-208ENST00000593261 USHBP1Q8N6Y0 703 aa8.09□□□□□ -1.11
NEK8-208ENST00000593261 ZCRB1Q8TBF4 217 aaKnown RBP8.09□□□□□ -1.11
NEK8-208ENST00000593261 C4AP0C0L4 1744 aa8.09□□□□□ -1.11
NEK8-208ENST00000593261 TIAM2Q8IVF5 1701 aa8.09□□□□□ -1.11
NEK8-208ENST00000593261 FANCIQ9NVI1 1328 aa8.08□□□□□ -1.12
NEK8-208ENST00000593261 A0A0G2JLW4 131 aa8.08□□□□□ -1.12
NEK8-208ENST00000593261 B4GALNT3Q6L9W6 998 aa8.08□□□□□ -1.12
NEK8-208ENST00000593261 FLAD1Q8NFF5 587 aa8.08□□□□□ -1.12
NEK8-208ENST00000593261 EDC4Q6P2E9 1401 aaKnown RBP8.08□□□□□ -1.12
NEK8-208ENST00000593261 C10orf71Q711Q0 1435 aa8.08□□□□□ -1.12
NEK8-208ENST00000593261 SBF1O95248 1867 aa8.08□□□□□ -1.12
NEK8-208ENST00000593261 PLEKHG2Q9H7P9 1386 aa8.08□□□□□ -1.12
NEK8-208ENST00000593261 NSD3Q9BZ95 1437 aa8.07□□□□□ -1.12
NEK8-208ENST00000593261 MMP10P09238 476 aa8.07□□□□□ -1.12
NEK8-208ENST00000593261 FSTL1Q12841 308 aa8.07□□□□□ -1.12
NEK8-208ENST00000593261 C9orf131Q5VYM1 1079 aa8.07□□□□□ -1.12
NEK8-208ENST00000593261 MPRIPQ6WCQ1 1025 aa8.07□□□□□ -1.12
NEK8-208ENST00000593261 A0A1W2PP64 1363 aa8.07□□□□□ -1.12
NEK8-208ENST00000593261 MAP3K19Q56UN5 1328 aa8.06□□□□□ -1.12
NEK8-208ENST00000593261 GNPATO15228 680 aa8.06□□□□□ -1.12
NEK8-208ENST00000593261 FBLN1P23142 703 aa8.06□□□□□ -1.12
NEK8-208ENST00000593261 LINC00116Q8NCU8 138 aa8.06□□□□□ -1.12
NEK8-208ENST00000593261 IP6K1Q92551 441 aa8.06□□□□□ -1.12
NEK8-208ENST00000593261 FCHSD2O94868 740 aa8.05□□□□□ -1.12
NEK8-208ENST00000593261 HOXC9P31274 260 aa8.05□□□□□ -1.12
NEK8-208ENST00000593261 PANK3Q9H999 370 aa8.05□□□□□ -1.12
NEK8-208ENST00000593261 RRAGCQ9HB90 399 aa8.05□□□□□ -1.12
NEK8-208ENST00000593261 RNF181Q9P0P0 153 aa8.05□□□□□ -1.12
NEK8-208ENST00000593261 KDM2BQ8NHM5 1336 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 PCDH11XQ9BZA7 1347 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 PCDH11YQ9BZA8 1340 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 COL5A3P25940 1745 aaPredicted RBP8.04□□□□□ -1.12
NEK8-208ENST00000593261 DPEP1P16444 411 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 SSFA2P28290 1259 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 AMPHP49418 695 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 RRP1P56182 461 aaKnown RBP8.04□□□□□ -1.12
NEK8-208ENST00000593261 CDCA8Q53HL2 280 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 SMC1BQ8NDV3 1235 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 CCDC88AQ3V6T2 1871 aa8.04□□□□□ -1.12
NEK8-208ENST00000593261 CC2D1BQ5T0F9 858 aaKnown RBP8.03□□□□□ -1.12
NEK8-208ENST00000593261 NBPF6Q5VWK0 638 aa8.03□□□□□ -1.12
NEK8-208ENST00000593261 HDGFL2Q7Z4V5 671 aaPredicted RBP8.03□□□□□ -1.12
NEK8-208ENST00000593261 RAPGEF4Q8WZA2 1011 aa8.03□□□□□ -1.12
NEK8-208ENST00000593261 NBPF4Q96M43 638 aa8.03□□□□□ -1.12
NEK8-208ENST00000593261 SLC12A5Q9H2X9 1139 aa8.03□□□□□ -1.12
NEK8-208ENST00000593261 RTL1A6NKG5 1358 aa8.02□□□□□ -1.13
NEK8-208ENST00000593261 NPC1L1Q9UHC9 1359 aa8.02□□□□□ -1.13
NEK8-208ENST00000593261 KIF20BQ96Q89 1820 aa8.02□□□□□ -1.13
NEK8-208ENST00000593261 CYP27B1O15528 508 aa8.02□□□□□ -1.13
NEK8-208ENST00000593261 RASSF7Q02833 373 aa8.02□□□□□ -1.13
NEK8-208ENST00000593261 ITPK1Q13572 414 aa8.02□□□□□ -1.13
NEK8-208ENST00000593261 RRS1Q15050 365 aaKnown RBP8.02□□□□□ -1.13
NEK8-208ENST00000593261 FAM161AQ3B820 660 aa8.02□□□□□ -1.13
NEK8-208ENST00000593261 CCDC136Q96JN2 1154 aa8.02□□□□□ -1.13
NEK8-208ENST00000593261 LOC102724428A0A0B4J2F2 783 aa8.01□□□□□ -1.13
NEK8-208ENST00000593261 TATP17735 454 aaPredicted RBP8.01□□□□□ -1.13
NEK8-208ENST00000593261 SIK1P57059 783 aa8.01□□□□□ -1.13
NEK8-208ENST00000593261 TGFB2P61812 414 aa8.01□□□□□ -1.13
NEK8-208ENST00000593261 PIGBQ92521 554 aa8.01□□□□□ -1.13
NEK8-208ENST00000593261 SMARCC1Q92922 1105 aaPredicted RBP8.01□□□□□ -1.13
NEK8-208ENST00000593261 RCAN3Q9UKA8 241 aa8.01□□□□□ -1.13
NEK8-208ENST00000593261 MYH14Q7Z406 1995 aaKnown RBP8.01□□□□□ -1.13
NEK8-208ENST00000593261 DLEC1Q9Y238 1755 aa8□□□□□ -1.13
NEK8-208ENST00000593261 FOXN1O15353 648 aa8□□□□□ -1.13
NEK8-208ENST00000593261 SLC24A1O60721 1099 aa8□□□□□ -1.13
NEK8-208ENST00000593261 AMER1Q5JTC6 1135 aaPredicted RBP8□□□□□ -1.13
NEK8-208ENST00000593261 COG3Q96JB2 828 aa8□□□□□ -1.13
NEK8-208ENST00000593261 CCDC87Q9NVE4 849 aa8□□□□□ -1.13
NEK8-208ENST00000593261 MKRN1Q9UHC7 482 aaKnown RBP8□□□□□ -1.13
NEK8-208ENST00000593261 ASAP1Q9ULH1 1129 aa8□□□□□ -1.13
NEK8-208ENST00000593261 KNSTRNQ9Y448 316 aa8□□□□□ -1.13
NEK8-208ENST00000593261 CGNL1Q0VF96 1302 aa8□□□□□ -1.13
NEK8-208ENST00000593261 TNRC18O15417 2968 aaPredicted RBP7.99□□□□□ -1.13
NEK8-208ENST00000593261 KCNA3P22001 575 aa7.99□□□□□ -1.13
NEK8-208ENST00000593261 PPP2R1AP30153 589 aa7.99□□□□□ -1.13
NEK8-208ENST00000593261 CHRNA5P30532 468 aa7.99□□□□□ -1.13
NEK8-208ENST00000593261 ATP6V1AP38606 617 aa7.99□□□□□ -1.13
NEK8-208ENST00000593261 DCAF5Q96JK2 942 aa7.99□□□□□ -1.13
NEK8-208ENST00000593261 TERF2IPQ9NYB0 399 aa7.99□□□□□ -1.13
NEK8-208ENST00000593261 KDRP35968 1356 aa7.98□□□□□ -1.13
NEK8-208ENST00000593261 GYS1P13807 737 aa7.98□□□□□ -1.13
NEK8-208ENST00000593261 DALRD3Q5D0E6 543 aaKnown RBP7.98□□□□□ -1.13
NEK8-208ENST00000593261 TMOD3Q9NYL9 352 aa7.98□□□□□ -1.13
NEK8-208ENST00000593261 PIM2Q9P1W9 311 aa7.98□□□□□ -1.13
NEK8-208ENST00000593261 PARP3Q9Y6F1 533 aa7.98□□□□□ -1.13
NEK8-208ENST00000593261 AFDNP55196 1824 aaKnown RBP7.98□□□□□ -1.13
NEK8-208ENST00000593261 KDM6AO15550 1401 aaPredicted RBP7.97□□□□□ -1.13
NEK8-208ENST00000593261 VIRMAQ69YN4 1812 aaKnown RBP7.97□□□□□ -1.13
NEK8-208ENST00000593261 HMGB2P26583 209 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms