RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SLC4A9Q96Q91 983 aa20.39■□□□□ 0.85
TRIM47-206ENST00000592942 MAP3K5Q99683 1374 aa20.38■□□□□ 0.85
TRIM47-206ENST00000592942 PDGFDQ9GZP0 370 aaPredicted RBP20.38■□□□□ 0.85
TRIM47-206ENST00000592942 LOC102724428A0A0B4J2F2 783 aa20.37■□□□□ 0.85
TRIM47-206ENST00000592942 SIK1P57059 783 aa20.37■□□□□ 0.85
TRIM47-206ENST00000592942 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
TRIM47-206ENST00000592942 STK32BQ9NY57 414 aa20.36■□□□□ 0.85
TRIM47-206ENST00000592942 CEMIPQ8WUJ3 1361 aa20.35■□□□□ 0.85
TRIM47-206ENST00000592942 ANP32CO43423 234 aa20.35■□□□□ 0.85
TRIM47-206ENST00000592942 ITPK1Q13572 414 aa20.35■□□□□ 0.85
TRIM47-206ENST00000592942 MRC1P22897 1456 aa20.35■□□□□ 0.85
TRIM47-206ENST00000592942 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
TRIM47-206ENST00000592942 PNNQ9H307 717 aaKnown RBP20.34■□□□□ 0.85
TRIM47-206ENST00000592942 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
TRIM47-206ENST00000592942 SLC39A6Q13433 755 aa20.33■□□□□ 0.85
TRIM47-206ENST00000592942 DCTN1Q14203 1278 aa20.33■□□□□ 0.85
TRIM47-206ENST00000592942 ATP6V1AP38606 617 aa20.32■□□□□ 0.84
TRIM47-206ENST00000592942 NFE2L2Q16236 605 aa20.32■□□□□ 0.84
TRIM47-206ENST00000592942 MCM10Q7L590 875 aa20.32■□□□□ 0.84
TRIM47-206ENST00000592942 LINC00116Q8NCU8 138 aa20.32■□□□□ 0.84
TRIM47-206ENST00000592942 RBM42Q9BTD8 480 aaKnown RBP20.31■□□□□ 0.84
TRIM47-206ENST00000592942 TAF1LQ8IZX4 1826 aa20.3■□□□□ 0.84
TRIM47-206ENST00000592942 PTCD1O75127 700 aaKnown RBP20.3■□□□□ 0.84
TRIM47-206ENST00000592942 WDR43Q15061 677 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRIM47-206ENST00000592942 CCDC146Q8IYE0 955 aa20.3■□□□□ 0.84
TRIM47-206ENST00000592942 AMIGO3Q86WK7 504 aa20.29■□□□□ 0.84
TRIM47-206ENST00000592942 PNPLA7Q6ZV29 1317 aa20.28■□□□□ 0.84
TRIM47-206ENST00000592942 NEFMP07197 916 aa20.28■□□□□ 0.84
TRIM47-206ENST00000592942 TMPOP42166 694 aaKnown RBP20.28■□□□□ 0.84
TRIM47-206ENST00000592942 TEFQ10587 303 aa20.28■□□□□ 0.84
TRIM47-206ENST00000592942 PNISRQ8TF01 805 aaKnown RBP20.28■□□□□ 0.84
TRIM47-206ENST00000592942 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
TRIM47-206ENST00000592942 RUNDC1Q96C34 613 aa20.28■□□□□ 0.84
TRIM47-206ENST00000592942 TFCP2L1Q9NZI6 479 aa20.28■□□□□ 0.84
TRIM47-206ENST00000592942 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
TRIM47-206ENST00000592942 SIPA1L3O60292 1781 aaPredicted RBP20.27■□□□□ 0.84
TRIM47-206ENST00000592942 CASZ1Q86V15 1759 aa20.27■□□□□ 0.84
TRIM47-206ENST00000592942 C5P01031 1676 aa20.27■□□□□ 0.84
TRIM47-206ENST00000592942 KCNQ3O43525 872 aa20.27■□□□□ 0.84
TRIM47-206ENST00000592942 MAPK8IP3Q9UPT6 1336 aa20.27■□□□□ 0.83
TRIM47-206ENST00000592942 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
TRIM47-206ENST00000592942 SMIM5Q71RC9 77 aa20.26■□□□□ 0.83
TRIM47-206ENST00000592942 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
TRIM47-206ENST00000592942 HMGB2P26583 209 aaKnown RBP20.25■□□□□ 0.83
TRIM47-206ENST00000592942 RIPK4P57078 832 aa20.25■□□□□ 0.83
TRIM47-206ENST00000592942 COL23A1Q86Y22 540 aaPredicted RBP20.25■□□□□ 0.83
TRIM47-206ENST00000592942 THUMPD2Q9BTF0 503 aaKnown RBP20.25■□□□□ 0.83
TRIM47-206ENST00000592942 KCPQ6ZWJ8 1503 aa20.25■□□□□ 0.83
TRIM47-206ENST00000592942 C4BP0C0L5 1744 aa20.24■□□□□ 0.83
TRIM47-206ENST00000592942 BTBD11A6QL63 1104 aa20.24■□□□□ 0.83
TRIM47-206ENST00000592942 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
TRIM47-206ENST00000592942 TUBGCP6Q96RT7 1819 aa20.24■□□□□ 0.83
TRIM47-206ENST00000592942 ZBTB7AO95365 584 aa20.23■□□□□ 0.83
TRIM47-206ENST00000592942 TAF7Q15545 349 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-206ENST00000592942 RC3H1Q5TC82 1133 aaKnown RBP20.23■□□□□ 0.83
TRIM47-206ENST00000592942 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-206ENST00000592942 MRS2Q9HD23 443 aa20.23■□□□□ 0.83
TRIM47-206ENST00000592942 QSER1Q2KHR3 1735 aa20.22■□□□□ 0.83
TRIM47-206ENST00000592942 DNAJC10Q8IXB1 793 aa20.22■□□□□ 0.83
TRIM47-206ENST00000592942 VSIG10Q8N0Z9 540 aa20.22■□□□□ 0.83
TRIM47-206ENST00000592942 MIS18AQ9NYP9 233 aa20.22■□□□□ 0.83
TRIM47-206ENST00000592942 TRIM35Q9UPQ4 493 aa20.22■□□□□ 0.83
TRIM47-206ENST00000592942 PTGER2P43116 358 aa20.21■□□□□ 0.83
TRIM47-206ENST00000592942 INTS5Q6P9B9 1019 aaKnown RBP20.21■□□□□ 0.83
TRIM47-206ENST00000592942 AK7Q96M32 723 aa20.21■□□□□ 0.83
TRIM47-206ENST00000592942 ATF5Q9Y2D1 282 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-206ENST00000592942 MYH14Q7Z406 1995 aaKnown RBP20.21■□□□□ 0.83
TRIM47-206ENST00000592942 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
TRIM47-206ENST00000592942 SGIP1Q9BQI5 828 aa20.2■□□□□ 0.82
TRIM47-206ENST00000592942 SPON1Q9HCB6 807 aa20.2■□□□□ 0.82
TRIM47-206ENST00000592942 UBR2Q8IWV8 1755 aa20.2■□□□□ 0.82
TRIM47-206ENST00000592942 CNTNAP4Q9C0A0 1308 aa20.2■□□□□ 0.82
TRIM47-206ENST00000592942 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-206ENST00000592942 TJP1Q07157 1748 aa20.19■□□□□ 0.82
TRIM47-206ENST00000592942 APAF1O14727 1248 aa20.19■□□□□ 0.82
TRIM47-206ENST00000592942 CYP19A1P11511 503 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-206ENST00000592942 CRKLP46109 303 aaKnown RBP20.19■□□□□ 0.82
TRIM47-206ENST00000592942 TTC5Q8N0Z6 440 aa20.19■□□□□ 0.82
TRIM47-206ENST00000592942 SLC16A10Q8TF71 515 aa20.19■□□□□ 0.82
TRIM47-206ENST00000592942 MTFR1LQ9H019 292 aa20.19■□□□□ 0.82
TRIM47-206ENST00000592942 UBR3Q6ZT12 1888 aa20.19■□□□□ 0.82
TRIM47-206ENST00000592942 CICQ96RK0 1608 aaPredicted RBP20.18■□□□□ 0.82
TRIM47-206ENST00000592942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
TRIM47-206ENST00000592942 GNPATO15228 680 aa20.18■□□□□ 0.82
TRIM47-206ENST00000592942 RPS6KA4O75676 772 aa20.18■□□□□ 0.82
TRIM47-206ENST00000592942 FLAD1Q8NFF5 587 aa20.18■□□□□ 0.82
TRIM47-206ENST00000592942 HEG1Q9ULI3 1381 aa20.18■□□□□ 0.82
TRIM47-206ENST00000592942 SSFA2P28290 1259 aa20.17■□□□□ 0.82
TRIM47-206ENST00000592942 FMNL2Q96PY5 1086 aa20.17■□□□□ 0.82
TRIM47-206ENST00000592942 PRAMEF22A3QJZ6 481 aa20.15■□□□□ 0.82
TRIM47-206ENST00000592942 PHF14O94880 888 aa20.15■□□□□ 0.82
TRIM47-206ENST00000592942 ARHGEF1Q92888 912 aaKnown RBP20.15■□□□□ 0.82
TRIM47-206ENST00000592942 RTCBQ9Y3I0 505 aaKnown RBP20.15■□□□□ 0.82
TRIM47-206ENST00000592942 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
TRIM47-206ENST00000592942 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
TRIM47-206ENST00000592942 MSH5O43196 834 aa20.13■□□□□ 0.81
TRIM47-206ENST00000592942 EIF4A1P60842 406 aaKnown RBP20.13■□□□□ 0.81
TRIM47-206ENST00000592942 TRAPPC3LQ5T215 181 aa20.13■□□□□ 0.81
TRIM47-206ENST00000592942 CCDC87Q9NVE4 849 aa20.13■□□□□ 0.81
TRIM47-206ENST00000592942 TEX13AQ9BXU3 409 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms