RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
ERCC1-217ENST00000592905 SIK1P57059 783 aa20.16■□□□□ 0.82
ERCC1-217ENST00000592905 IL17REQ8NFR9 667 aa20.16■□□□□ 0.82
ERCC1-217ENST00000592905 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
ERCC1-217ENST00000592905 MAP3K5Q99683 1374 aa20.16■□□□□ 0.82
ERCC1-217ENST00000592905 SLC52A2Q9HAB3 445 aa20.15■□□□□ 0.82
ERCC1-217ENST00000592905 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.81
ERCC1-217ENST00000592905 CASZ1Q86V15 1759 aa20.14■□□□□ 0.81
ERCC1-217ENST00000592905 ADAMTS7Q9UKP4 1686 aa20.14■□□□□ 0.81
ERCC1-217ENST00000592905 ATP6V1AP38606 617 aa20.14■□□□□ 0.81
ERCC1-217ENST00000592905 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
ERCC1-217ENST00000592905 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
ERCC1-217ENST00000592905 SLC39A6Q13433 755 aa20.13■□□□□ 0.81
ERCC1-217ENST00000592905 ITPK1Q13572 414 aa20.13■□□□□ 0.81
ERCC1-217ENST00000592905 SLC4A9Q96Q91 983 aa20.13■□□□□ 0.81
ERCC1-217ENST00000592905 PLEKHF1Q96S99 279 aa20.13■□□□□ 0.81
ERCC1-217ENST00000592905 ZBTB7AO95365 584 aa20.12■□□□□ 0.81
ERCC1-217ENST00000592905 LINC00116Q8NCU8 138 aa20.12■□□□□ 0.81
ERCC1-217ENST00000592905 DCTN1Q14203 1278 aa20.11■□□□□ 0.81
ERCC1-217ENST00000592905 MCM10Q7L590 875 aa20.11■□□□□ 0.81
ERCC1-217ENST00000592905 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
ERCC1-217ENST00000592905 NEFMP07197 916 aa20.1■□□□□ 0.81
ERCC1-217ENST00000592905 TEFQ10587 303 aa20.1■□□□□ 0.81
ERCC1-217ENST00000592905 SMIM5Q71RC9 77 aa20.1■□□□□ 0.81
ERCC1-217ENST00000592905 ATF5Q9Y2D1 282 aaPredicted RBP20.1■□□□□ 0.81
ERCC1-217ENST00000592905 MRC1P22897 1456 aa20.1■□□□□ 0.81
ERCC1-217ENST00000592905 PNPLA7Q6ZV29 1317 aa20.09■□□□□ 0.81
ERCC1-217ENST00000592905 SIPA1L3O60292 1781 aaPredicted RBP20.09■□□□□ 0.81
ERCC1-217ENST00000592905 WDR43Q15061 677 aaKnown RBP eCLIP20.09■□□□□ 0.81
ERCC1-217ENST00000592905 CCDC184Q52MB2 194 aa20.09■□□□□ 0.81
ERCC1-217ENST00000592905 CCDC146Q8IYE0 955 aa20.09■□□□□ 0.81
ERCC1-217ENST00000592905 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
ERCC1-217ENST00000592905 QSER1Q2KHR3 1735 aa20.09■□□□□ 0.81
ERCC1-217ENST00000592905 MSH5O43196 834 aa20.08■□□□□ 0.81
ERCC1-217ENST00000592905 ANP32CO43423 234 aa20.08■□□□□ 0.81
ERCC1-217ENST00000592905 PNNQ9H307 717 aaKnown RBP20.08■□□□□ 0.81
ERCC1-217ENST00000592905 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
ERCC1-217ENST00000592905 LRP5O75197 1615 aa20.08■□□□□ 0.8
ERCC1-217ENST00000592905 MAPK8IP3Q9UPT6 1336 aa20.07■□□□□ 0.8
ERCC1-217ENST00000592905 AMIGO3Q86WK7 504 aa20.07■□□□□ 0.8
ERCC1-217ENST00000592905 AK7Q96M32 723 aa20.07■□□□□ 0.8
ERCC1-217ENST00000592905 SPON1Q9HCB6 807 aa20.07■□□□□ 0.8
ERCC1-217ENST00000592905 NFE2L2Q16236 605 aa20.06■□□□□ 0.8
ERCC1-217ENST00000592905 UBR3Q6ZT12 1888 aa20.06■□□□□ 0.8
ERCC1-217ENST00000592905 MYH14Q7Z406 1995 aaKnown RBP20.05■□□□□ 0.8
ERCC1-217ENST00000592905 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
ERCC1-217ENST00000592905 CEMIPQ8WUJ3 1361 aa20.05■□□□□ 0.8
ERCC1-217ENST00000592905 COL5A3P25940 1745 aaPredicted RBP20.05■□□□□ 0.8
ERCC1-217ENST00000592905 ZNF831Q5JPB2 1677 aa20.04■□□□□ 0.8
ERCC1-217ENST00000592905 PHF14O94880 888 aa20.04■□□□□ 0.8
ERCC1-217ENST00000592905 TJP1Q07157 1748 aa20.04■□□□□ 0.8
ERCC1-217ENST00000592905 KCNQ3O43525 872 aa20.03■□□□□ 0.8
ERCC1-217ENST00000592905 THUMPD2Q9BTF0 503 aaKnown RBP20.03■□□□□ 0.8
ERCC1-217ENST00000592905 RRP7AQ9Y3A4 280 aaKnown RBP20.03■□□□□ 0.8
ERCC1-217ENST00000592905 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.8
ERCC1-217ENST00000592905 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
ERCC1-217ENST00000592905 GNPATO15228 680 aa20.02■□□□□ 0.8
ERCC1-217ENST00000592905 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
ERCC1-217ENST00000592905 HMGB2P26583 209 aaKnown RBP20.02■□□□□ 0.8
ERCC1-217ENST00000592905 DNAJC10Q8IXB1 793 aa20.02■□□□□ 0.8
ERCC1-217ENST00000592905 TTC5Q8N0Z6 440 aa20.02■□□□□ 0.8
ERCC1-217ENST00000592905 MTFR1LQ9H019 292 aa20.02■□□□□ 0.8
ERCC1-217ENST00000592905 UBR2Q8IWV8 1755 aa20.02■□□□□ 0.8
ERCC1-217ENST00000592905 RIPK4P57078 832 aa20.01■□□□□ 0.79
ERCC1-217ENST00000592905 NEUROD2Q15784 382 aa20.01■□□□□ 0.79
ERCC1-217ENST00000592905 ZNF790Q6PG37 636 aa20.01■□□□□ 0.79
ERCC1-217ENST00000592905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20■□□□□ 0.79
ERCC1-217ENST00000592905 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
ERCC1-217ENST00000592905 PTGER2P43116 358 aa20■□□□□ 0.79
ERCC1-217ENST00000592905 RUNDC1Q96C34 613 aa20■□□□□ 0.79
ERCC1-217ENST00000592905 MIS18AQ9NYP9 233 aa20■□□□□ 0.79
ERCC1-217ENST00000592905 ZNF496Q96IT1 587 aaPredicted RBP19.99■□□□□ 0.79
ERCC1-217ENST00000592905 PPP1R1BQ9UD71 204 aaPredicted RBP19.99■□□□□ 0.79
ERCC1-217ENST00000592905 CRKLP46109 303 aaKnown RBP19.98■□□□□ 0.79
ERCC1-217ENST00000592905 MSL1Q68DK7 614 aa19.98■□□□□ 0.79
ERCC1-217ENST00000592905 FLAD1Q8NFF5 587 aa19.98■□□□□ 0.79
ERCC1-217ENST00000592905 SLC16A10Q8TF71 515 aa19.98■□□□□ 0.79
ERCC1-217ENST00000592905 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
ERCC1-217ENST00000592905 TAF7Q15545 349 aaPredicted RBP19.97■□□□□ 0.79
ERCC1-217ENST00000592905 RC3H1Q5TC82 1133 aaKnown RBP19.97■□□□□ 0.79
ERCC1-217ENST00000592905 RTCBQ9Y3I0 505 aaKnown RBP19.97■□□□□ 0.79
ERCC1-217ENST00000592905 CNTNAP4Q9C0A0 1308 aa19.97■□□□□ 0.79
ERCC1-217ENST00000592905 SSFA2P28290 1259 aa19.96■□□□□ 0.79
ERCC1-217ENST00000592905 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
ERCC1-217ENST00000592905 SGIP1Q9BQI5 828 aa19.96■□□□□ 0.79
ERCC1-217ENST00000592905 CICQ96RK0 1608 aaPredicted RBP19.95■□□□□ 0.78
ERCC1-217ENST00000592905 SENP3-EIF4A1A0A087X0R7 540 aa19.95■□□□□ 0.78
ERCC1-217ENST00000592905 RPS6KA4O75676 772 aa19.95■□□□□ 0.78
ERCC1-217ENST00000592905 CYP19A1P11511 503 aaPredicted RBP19.95■□□□□ 0.78
ERCC1-217ENST00000592905 TRAPPC3LQ5T215 181 aa19.95■□□□□ 0.78
ERCC1-217ENST00000592905 VSIG10Q8N0Z9 540 aa19.95■□□□□ 0.78
ERCC1-217ENST00000592905 FMNL2Q96PY5 1086 aa19.95■□□□□ 0.78
ERCC1-217ENST00000592905 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
ERCC1-217ENST00000592905 ARHGEF1Q92888 912 aaKnown RBP19.94■□□□□ 0.78
ERCC1-217ENST00000592905 COL24A1Q17RW2 1714 aa19.93■□□□□ 0.78
ERCC1-217ENST00000592905 PRAMEF22A3QJZ6 481 aa19.93■□□□□ 0.78
ERCC1-217ENST00000592905 PNISRQ8TF01 805 aaKnown RBP19.93■□□□□ 0.78
ERCC1-217ENST00000592905 CCDC87Q9NVE4 849 aa19.93■□□□□ 0.78
ERCC1-217ENST00000592905 APAF1O14727 1248 aa19.92■□□□□ 0.78
ERCC1-217ENST00000592905 ARXQ96QS3 562 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms