RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 SPATA31A3Q5VYP0 1347 aa17.83■□□□□ 0.45
RANBP3-229ENST00000592771 NUCB1Q02818 461 aa17.83■□□□□ 0.44
RANBP3-229ENST00000592771 SIRT2Q8IXJ6 389 aa17.83■□□□□ 0.44
RANBP3-229ENST00000592771 ZNF530Q6P9A1 599 aaPredicted RBP17.82■□□□□ 0.44
RANBP3-229ENST00000592771 GCC1Q96CN9 775 aa17.82■□□□□ 0.44
RANBP3-229ENST00000592771 TBC1D2Q9BYX2 928 aa17.82■□□□□ 0.44
RANBP3-229ENST00000592771 N4BP2Q86UW6 1770 aaPredicted RBP17.82■□□□□ 0.44
RANBP3-229ENST00000592771 CCDC30Q5VVM6 783 aa17.82■□□□□ 0.44
RANBP3-229ENST00000592771 C1orf115Q9H7X2 142 aa17.82■□□□□ 0.44
RANBP3-229ENST00000592771 PLEKHG2Q9H7P9 1386 aa17.81■□□□□ 0.44
RANBP3-229ENST00000592771 G2E3Q7L622 706 aa17.81■□□□□ 0.44
RANBP3-229ENST00000592771 ATP10DQ9P241 1426 aa17.81■□□□□ 0.44
RANBP3-229ENST00000592771 CPDO75976 1380 aa17.8■□□□□ 0.44
RANBP3-229ENST00000592771 ZC3H6P61129 1189 aaKnown RBP17.8■□□□□ 0.44
RANBP3-229ENST00000592771 BRINP3Q76B58 766 aa17.8■□□□□ 0.44
RANBP3-229ENST00000592771 STK31Q9BXU1 1019 aa17.8■□□□□ 0.44
RANBP3-229ENST00000592771 C22orf23Q9BZE7 217 aa17.8■□□□□ 0.44
RANBP3-229ENST00000592771 LGR6Q9HBX8 967 aa17.8■□□□□ 0.44
RANBP3-229ENST00000592771 SIPA1L3O60292 1781 aaPredicted RBP17.8■□□□□ 0.44
RANBP3-229ENST00000592771 PLEKHG5O94827 1062 aa17.79■□□□□ 0.44
RANBP3-229ENST00000592771 HOXB7P09629 217 aa17.79■□□□□ 0.44
RANBP3-229ENST00000592771 LTBP4Q8N2S1 1624 aa17.78■□□□□ 0.44
RANBP3-229ENST00000592771 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
RANBP3-229ENST00000592771 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
RANBP3-229ENST00000592771 EIF4A1P60842 406 aaKnown RBP17.78■□□□□ 0.44
RANBP3-229ENST00000592771 CHD1LQ86WJ1 897 aa17.78■□□□□ 0.44
RANBP3-229ENST00000592771 FLIIQ13045 1269 aa17.77■□□□□ 0.44
RANBP3-229ENST00000592771 C1orf141Q5JVX7 400 aa17.77■□□□□ 0.44
RANBP3-229ENST00000592771 PXDNLA1KZ92 1463 aa17.77■□□□□ 0.43
RANBP3-229ENST00000592771 L1TD1Q5T7N2 865 aaKnown RBP17.76■□□□□ 0.43
RANBP3-229ENST00000592771 ANKRD44Q8N8A2 993 aa17.76■□□□□ 0.43
RANBP3-229ENST00000592771 SLKQ9H2G2 1235 aaPredicted RBP17.76■□□□□ 0.43
RANBP3-229ENST00000592771 TEFQ10587 303 aa17.76■□□□□ 0.43
RANBP3-229ENST00000592771 RPAP2Q8IXW5 612 aaPredicted RBP17.76■□□□□ 0.43
RANBP3-229ENST00000592771 EIF5BO60841 1220 aaKnown RBP17.75■□□□□ 0.43
RANBP3-229ENST00000592771 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
RANBP3-229ENST00000592771 CHMP5Q9NZZ3 219 aa17.75■□□□□ 0.43
RANBP3-229ENST00000592771 SLAIN2Q9P270 581 aa17.75■□□□□ 0.43
RANBP3-229ENST00000592771 SOS2Q07890 1332 aaPredicted RBP17.75■□□□□ 0.43
RANBP3-229ENST00000592771 CABLES1Q8TDN4 633 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 MEIS3Q99687 375 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 LNPKQ9C0E8 428 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 DCTPP1Q9H773 170 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 BRPF3Q9ULD4 1205 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 F6X3S4 739 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 RBM25P49756 843 aaKnown RBP17.74■□□□□ 0.43
RANBP3-229ENST00000592771 CEP85Q6P2H3 762 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 CHMP4AQ9BY43 222 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■□□□□ 10
RANBP3-229ENST00000592771 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 SCN11AQ9UI33 1791 aa17.74■□□□□ 0.43
RANBP3-229ENST00000592771 PKD1L3Q7Z443 1732 aa17.73■□□□□ 0.43
RANBP3-229ENST00000592771 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
RANBP3-229ENST00000592771 MEGF6O75095 1541 aa17.73■□□□□ 0.43
RANBP3-229ENST00000592771 SNX21Q969T3 373 aa17.72■□□□□ 0.43
RANBP3-229ENST00000592771 BTBD11A6QL63 1104 aa17.72■□□□□ 0.43
RANBP3-229ENST00000592771 KCNQ3O43525 872 aa17.72■□□□□ 0.43
RANBP3-229ENST00000592771 MFAP1P55081 439 aaKnown RBP17.72■□□□□ 0.43
RANBP3-229ENST00000592771 BMP2KLQ5H9B9 411 aa17.72■□□□□ 0.43
RANBP3-229ENST00000592771 ANKRD45Q5TZF3 282 aa17.72■□□□□ 0.43
RANBP3-229ENST00000592771 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
RANBP3-229ENST00000592771 NLRP2Q9NX02 1062 aa17.72■□□□□ 0.43
RANBP3-229ENST00000592771 ABCA3Q99758 1704 aa17.71■□□□□ 0.43
RANBP3-229ENST00000592771 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.43
RANBP3-229ENST00000592771 HSCBQ8IWL3 235 aa17.71■□□□□ 0.43
RANBP3-229ENST00000592771 NHSL1Q5SYE7 1610 aa17.71■□□□□ 0.42
RANBP3-229ENST00000592771 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
RANBP3-229ENST00000592771 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
RANBP3-229ENST00000592771 NECTIN2Q92692 538 aa17.7■□□□□ 0.42
RANBP3-229ENST00000592771 KDM6AO15550 1401 aaPredicted RBP17.7■□□□□ 0.42
RANBP3-229ENST00000592771 MCM4P33991 863 aa17.69■□□□□ 0.42
RANBP3-229ENST00000592771 CHRNA2Q15822 529 aa17.69■□□□□ 0.42
RANBP3-229ENST00000592771 MRC1P22897 1456 aa17.69■□□□□ 0.42
RANBP3-229ENST00000592771 FAM43AQ8N2R8 423 aa17.68■□□□□ 0.42
RANBP3-229ENST00000592771 PHKG2P15735 406 aa17.68■□□□□ 0.42
RANBP3-229ENST00000592771 SPG7Q9UQ90 795 aa17.68■□□□□ 0.42
RANBP3-229ENST00000592771 GNAI3P08754 354 aa17.67■□□□□ 0.42
RANBP3-229ENST00000592771 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
RANBP3-229ENST00000592771 GNAI2P04899 355 aa17.66■□□□□ 0.42
RANBP3-229ENST00000592771 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
RANBP3-229ENST00000592771 PHAXQ9H814 394 aaKnown RBP17.66■□□□□ 0.42
RANBP3-229ENST00000592771 PARP4Q9UKK3 1724 aaKnown RBP17.66■□□□□ 0.42
RANBP3-229ENST00000592771 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
RANBP3-229ENST00000592771 CHPF2Q9P2E5 772 aa17.66■□□□□ 0.42
RANBP3-229ENST00000592771 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
RANBP3-229ENST00000592771 TOM1O60784 492 aa17.65■□□□□ 0.42
RANBP3-229ENST00000592771 EIF2S2P20042 333 aaKnown RBP17.65■□□□□ 0.42
RANBP3-229ENST00000592771 CERKQ8TCT0 537 aa17.65■□□□□ 0.42
RANBP3-229ENST00000592771 HMMRO75330 724 aa17.64■□□□□ 0.42
RANBP3-229ENST00000592771 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.42
RANBP3-229ENST00000592771 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.42
RANBP3-229ENST00000592771 ISY1Q9ULR0 285 aaKnown RBP17.64■□□□□ 0.42
RANBP3-229ENST00000592771 PTMSP20962 102 aa17.64■□□□□ 0.41
RANBP3-229ENST00000592771 RTN4Q9NQC3 1192 aaKnown RBP17.64■□□□□ 0.41
RANBP3-229ENST00000592771 WDR17Q8IZU2 1322 aa17.64■□□□□ 0.41
RANBP3-229ENST00000592771 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
RANBP3-229ENST00000592771 DDIT3P35638 169 aa17.63■□□□□ 0.41
RANBP3-229ENST00000592771 PIP4K2BP78356 416 aa17.63■□□□□ 0.41
RANBP3-229ENST00000592771 DBF4Q9UBU7 674 aaPredicted RBP17.63■□□□□ 0.41
RANBP3-229ENST00000592771 UBAP1LF5GYI3 381 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms