RNA–Protein interactions for RNA: ENST00000592762.5

MARK4-209, Transcript of microtubule affinity regulating kinase 4, human

TSL 5

Gene MARK4, Length 683 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK4-209	ENST00000592762	ATP6V1A	P38606	617 aa		33.4	■■■□□ 2.94
MARK4-209	ENST00000592762	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.4	■■■□□ 2.94
MARK4-209	ENST00000592762	COL3A1	P02461	1466 aa	Predicted RBP	33.39	■■■□□ 2.94
MARK4-209	ENST00000592762	AKAP4	Q5JQC9	854 aa		33.38	■■■□□ 2.93
MARK4-209	ENST00000592762	SYT17	Q9BSW7	474 aa		33.38	■■■□□ 2.93
MARK4-209	ENST00000592762	UBR3	Q6ZT12	1888 aa		33.37	■■■□□ 2.93
MARK4-209	ENST00000592762	U2SURP	O15042	1029 aa	Known RBP	33.37	■■■□□ 2.93
MARK4-209	ENST00000592762	VIRMA	Q69YN4	1812 aa	Known RBP	33.37	■■■□□ 2.93
MARK4-209	ENST00000592762	LINC00116	Q8NCU8	138 aa		33.36	■■■□□ 2.93
MARK4-209	ENST00000592762	CFAP53	Q96M91	514 aa		33.36	■■■□□ 2.93
MARK4-209	ENST00000592762	ITPK1	Q13572	414 aa		33.35	■■■□□ 2.93
MARK4-209	ENST00000592762	RBM42	Q9BTD8	480 aa	Known RBP	33.35	■■■□□ 2.93
MARK4-209	ENST00000592762	NFATC2IP	Q8NCF5	419 aa		33.34	■■■□□ 2.93
MARK4-209	ENST00000592762	MTHFSD	Q2M296	383 aa	Known RBP	33.31	■■■□□ 2.92
MARK4-209	ENST00000592762	ZNF831	Q5JPB2	1677 aa		33.31	■■■□□ 2.92
MARK4-209	ENST00000592762	PHF14	O94880	888 aa		33.3	■■■□□ 2.92
MARK4-209	ENST00000592762	PPP2R1A	P30153	589 aa		33.3	■■■□□ 2.92
MARK4-209	ENST00000592762	MAP3K5	Q99683	1374 aa		33.29	■■■□□ 2.92
MARK4-209	ENST00000592762	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.28	■■■□□ 2.92
MARK4-209	ENST00000592762	SSFA2	P28290	1259 aa		33.28	■■■□□ 2.92
MARK4-209	ENST00000592762	MSL1	Q68DK7	614 aa		33.28	■■■□□ 2.92
MARK4-209	ENST00000592762	AMIGO3	Q86WK7	504 aa		33.28	■■■□□ 2.92
MARK4-209	ENST00000592762	KLHL34	Q8N239	644 aa		33.28	■■■□□ 2.92
MARK4-209	ENST00000592762	SLC4A9	Q96Q91	983 aa		33.28	■■■□□ 2.92
MARK4-209	ENST00000592762	LGR6	Q9HBX8	967 aa		33.28	■■■□□ 2.92
MARK4-209	ENST00000592762	GNPAT	O15228	680 aa		33.27	■■■□□ 2.92
MARK4-209	ENST00000592762	RNMT	O43148	476 aa	Known RBP	33.26	■■■□□ 2.91
MARK4-209	ENST00000592762	SMIM5	Q71RC9	77 aa		33.26	■■■□□ 2.91
MARK4-209	ENST00000592762	NUDC	Q9Y266	331 aa		33.26	■■■□□ 2.91
MARK4-209	ENST00000592762	PTCD1	O75127	700 aa	Known RBP	33.25	■■■□□ 2.91
MARK4-209	ENST00000592762	SLC52A2	Q9HAB3	445 aa		33.25	■■■□□ 2.91
MARK4-209	ENST00000592762	COL5A3	P25940	1745 aa	Predicted RBP	33.24	■■■□□ 2.91
MARK4-209	ENST00000592762	GAS2L2	Q8NHY3	880 aa		33.21	■■■□□ 2.91
MARK4-209	ENST00000592762	MYH14	Q7Z406	1995 aa	Known RBP	33.2	■■■□□ 2.91
MARK4-209	ENST00000592762	RC3H1	Q5TC82	1133 aa	Known RBP	33.2	■■■□□ 2.91
MARK4-209	ENST00000592762	RTCB	Q9Y3I0	505 aa	Known RBP	33.2	■■■□□ 2.91
MARK4-209	ENST00000592762	ADAMTS7	Q9UKP4	1686 aa		33.2	■■■□□ 2.9
MARK4-209	ENST00000592762	MRC1	P22897	1456 aa		33.19	■■■□□ 2.9
MARK4-209	ENST00000592762	CNTNAP4	Q9C0A0	1308 aa		33.18	■■■□□ 2.9
MARK4-209	ENST00000592762	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.17	■■■□□ 2.9
MARK4-209	ENST00000592762	PRKAR2B	P31323	418 aa		33.17	■■■□□ 2.9
MARK4-209	ENST00000592762	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.17	■■■□□ 2.9
MARK4-209	ENST00000592762	TRAPPC3L	Q5T215	181 aa		33.17	■■■□□ 2.9
MARK4-209	ENST00000592762	RSPH6A	Q9H0K4	717 aa		33.16	■■■□□ 2.9
MARK4-209	ENST00000592762	GNAT3	A8MTJ3	354 aa		33.15	■■■□□ 2.9
MARK4-209	ENST00000592762	TJP1	Q07157	1748 aa		33.14	■■■□□ 2.89
MARK4-209	ENST00000592762	RPS6KA4	O75676	772 aa		33.13	■■■□□ 2.89
MARK4-209	ENST00000592762	SLC39A6	Q13433	755 aa		33.13	■■■□□ 2.89
MARK4-209	ENST00000592762	PHACTR3	Q96KR7	559 aa		33.13	■■■□□ 2.89
MARK4-209	ENST00000592762	ADRA2B	P18089	450 aa		33.12	■■■□□ 2.89
MARK4-209	ENST00000592762	CIC	Q96RK0	1608 aa	Predicted RBP	33.12	■■■□□ 2.89
MARK4-209	ENST00000592762	YY1	P25490	414 aa		33.11	■■■□□ 2.89
MARK4-209	ENST00000592762	NLGN2	Q8NFZ4	835 aa		33.11	■■■□□ 2.89
MARK4-209	ENST00000592762	FCHSD2	O94868	740 aa		33.1	■■■□□ 2.89
MARK4-209	ENST00000592762	CRKL	P46109	303 aa	Known RBP	33.1	■■■□□ 2.89
MARK4-209	ENST00000592762	CHD4	Q14839	1912 aa		33.09	■■■□□ 2.89
MARK4-209	ENST00000592762	TEF	Q10587	303 aa		33.09	■■■□□ 2.89
MARK4-209	ENST00000592762	GPR162	Q16538	588 aa		33.09	■■■□□ 2.89
MARK4-209	ENST00000592762	IL17RE	Q8NFR9	667 aa		33.09	■■■□□ 2.89
MARK4-209	ENST00000592762	ARHGEF1	Q92888	912 aa	Known RBP	33.09	■■■□□ 2.89
MARK4-209	ENST00000592762	CD2AP	Q9Y5K6	639 aa		33.08	■■■□□ 2.89
MARK4-209	ENST00000592762	RFC4	P35249	363 aa		33.07	■■■□□ 2.88
MARK4-209	ENST00000592762	DDX10	Q13206	875 aa	Known RBP	33.07	■■■□□ 2.88
MARK4-209	ENST00000592762	DNAJC10	Q8IXB1	793 aa		33.07	■■■□□ 2.88
MARK4-209	ENST00000592762	PELP1	Q8IZL8	1130 aa	Known RBP	33.05	■■■□□ 2.88
MARK4-209	ENST00000592762	TTC5	Q8N0Z6	440 aa		33.05	■■■□□ 2.88
MARK4-209	ENST00000592762	KCP	Q6ZWJ8	1503 aa		33.05	■■■□□ 2.88
MARK4-209	ENST00000592762	SIPA1L3	O60292	1781 aa	Predicted RBP	33.05	■■■□□ 2.88
MARK4-209	ENST00000592762	UBR2	Q8IWV8	1755 aa		33.04	■■■□□ 2.88
MARK4-209	ENST00000592762	NLGN1	Q8N2Q7	840 aa		33.04	■■■□□ 2.88
MARK4-209	ENST00000592762	C4A	P0C0L4	1744 aa		33.04	■■■□□ 2.88
MARK4-209	ENST00000592762	VSIG10	Q8N0Z9	540 aa		33.02	■■■□□ 2.88
MARK4-209	ENST00000592762	MMP10	P09238	476 aa		33.01	■■■□□ 2.87
MARK4-209	ENST00000592762	RALBP1	Q15311	655 aa		33.01	■■■□□ 2.87
MARK4-209	ENST00000592762	INTS5	Q6P9B9	1019 aa	Known RBP	33.01	■■■□□ 2.87
MARK4-209	ENST00000592762	CCDC87	Q9NVE4	849 aa		33.01	■■■□□ 2.87
MARK4-209	ENST00000592762	CEMIP	Q8WUJ3	1361 aa		33	■■■□□ 2.87
MARK4-209	ENST00000592762	NEFM	P07197	916 aa		32.99	■■■□□ 2.87
MARK4-209	ENST00000592762	CYP19A1	P11511	503 aa	Predicted RBP	32.99	■■■□□ 2.87
MARK4-209	ENST00000592762	GYS1	P13807	737 aa		32.99	■■■□□ 2.87
MARK4-209	ENST00000592762	RTF1	Q92541	710 aa	Known RBP	32.99	■■■□□ 2.87
MARK4-209	ENST00000592762	ZNF790	Q6PG37	636 aa		32.98	■■■□□ 2.87
MARK4-209	ENST00000592762	ZNF496	Q96IT1	587 aa	Predicted RBP	32.95	■■■□□ 2.87
MARK4-209	ENST00000592762	BTBD11	A6QL63	1104 aa		32.94	■■■□□ 2.86
MARK4-209	ENST00000592762	SRP68	Q9UHB9	627 aa	Known RBP	32.93	■■■□□ 2.86
MARK4-209	ENST00000592762	SOS1	Q07889	1333 aa	Predicted RBP	32.93	■■■□□ 2.86
MARK4-209	ENST00000592762	USP42	Q9H9J4	1324 aa	Known RBP	32.93	■■■□□ 2.86
MARK4-209	ENST00000592762	STARD3NL	O95772	234 aa		32.92	■■■□□ 2.86
MARK4-209	ENST00000592762	MCM10	Q7L590	875 aa		32.92	■■■□□ 2.86
MARK4-209	ENST00000592762	DLG5	Q8TDM6	1919 aa		32.92	■■■□□ 2.86
MARK4-209	ENST00000592762	HEG1	Q9ULI3	1381 aa		32.92	■■■□□ 2.86
MARK4-209	ENST00000592762	HTATSF1	O43719	755 aa	Known RBP	32.91	■■■□□ 2.86
MARK4-209	ENST00000592762	GRIN3B	O60391	1043 aa		32.91	■■■□□ 2.86
MARK4-209	ENST00000592762	ZPR1	O75312	459 aa		32.91	■■■□□ 2.86
MARK4-209	ENST00000592762	FMNL2	Q96PY5	1086 aa		32.91	■■■□□ 2.86
MARK4-209	ENST00000592762	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.91	■■■□□ 2.86
MARK4-209	ENST00000592762	PNN	Q9H307	717 aa	Known RBP	32.91	■■■□□ 2.86
MARK4-209	ENST00000592762	ZBTB1	Q9Y2K1	713 aa		32.91	■■■□□ 2.86
MARK4-209	ENST00000592762	PARP3	Q9Y6F1	533 aa		32.91	■■■□□ 2.86
MARK4-209	ENST00000592762	UTRN	P46939	3433 aa		32.9	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms