RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 ZNF445P59923 1031 aa14.26□□□□□ -0.13
ZNF540-210ENST00000592533 EYA1Q99502 592 aa14.26□□□□□ -0.13
ZNF540-210ENST00000592533 LTN1O94822 1766 aa14.25□□□□□ -0.13
ZNF540-210ENST00000592533 KDM3BQ7LBC6 1761 aa14.25□□□□□ -0.13
ZNF540-210ENST00000592533 CRYBG1Q9Y4K1 1723 aa14.25□□□□□ -0.13
ZNF540-210ENST00000592533 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
ZNF540-210ENST00000592533 AOX1Q06278 1338 aa14.24□□□□□ -0.13
ZNF540-210ENST00000592533 GNAI3P08754 354 aa14.24□□□□□ -0.13
ZNF540-210ENST00000592533 PHRF1Q9P1Y6 1649 aaKnown RBP14.24□□□□□ -0.13
ZNF540-210ENST00000592533 STAP2Q9UGK3 403 aa14.24□□□□□ -0.13
ZNF540-210ENST00000592533 CCDC30Q5VVM6 783 aa14.24□□□□□ -0.13
ZNF540-210ENST00000592533 STK31Q9BXU1 1019 aa14.24□□□□□ -0.13
ZNF540-210ENST00000592533 LMBRD1Q9NUN5 540 aa14.24□□□□□ -0.13
ZNF540-210ENST00000592533 MIS18AQ9NYP9 233 aa14.24□□□□□ -0.13
ZNF540-210ENST00000592533 FER1L4A9Z1Z3 1794 aa14.23□□□□□ -0.13
ZNF540-210ENST00000592533 ESPNB1AK53 854 aa14.23□□□□□ -0.13
ZNF540-210ENST00000592533 EPB41L2O43491 1005 aaKnown RBP14.23□□□□□ -0.13
ZNF540-210ENST00000592533 F6X3S4 739 aa14.23□□□□□ -0.13
ZNF540-210ENST00000592533 MCM2P49736 904 aa14.23□□□□□ -0.13
ZNF540-210ENST00000592533 ATP8B2P98198 1209 aa14.23□□□□□ -0.13
ZNF540-210ENST00000592533 FLIIQ13045 1269 aa14.23□□□□□ -0.13
ZNF540-210ENST00000592533 AMOTL2Q9Y2J4 779 aa14.23□□□□□ -0.13
ZNF540-210ENST00000592533 DDX49Q9Y6V7 483 aaKnown RBP14.23□□□□□ -0.13
ZNF540-210ENST00000592533 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
ZNF540-210ENST00000592533 ANAPC15P60006 121 aa14.22□□□□□ -0.13
ZNF540-210ENST00000592533 CCDC173Q0VFZ6 552 aa14.22□□□□□ -0.13
ZNF540-210ENST00000592533 LRRCC1Q9C099 1032 aa14.22□□□□□ -0.13
ZNF540-210ENST00000592533 EID1Q9Y6B2 187 aa14.22□□□□□ -0.13
ZNF540-210ENST00000592533 SRCIN1Q9C0H9 1055 aa14.22□□□□□ -0.13
ZNF540-210ENST00000592533 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
ZNF540-210ENST00000592533 GNAT3A8MTJ3 354 aa14.21□□□□□ -0.13
ZNF540-210ENST00000592533 ESYT1Q9BSJ8 1104 aa14.21□□□□□ -0.13
ZNF540-210ENST00000592533 SLC4A10Q6U841 1118 aa14.21□□□□□ -0.13
ZNF540-210ENST00000592533 ZDHHC9Q9Y397 364 aa14.21□□□□□ -0.13
ZNF540-210ENST00000592533 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
ZNF540-210ENST00000592533 MX1P20591 662 aa14.21□□□□□ -0.14
ZNF540-210ENST00000592533 AMPHP49418 695 aa14.21□□□□□ -0.14
ZNF540-210ENST00000592533 NUTM2FA1L443 756 aa14.2□□□□□ -0.14
ZNF540-210ENST00000592533 APBB1O00213 710 aa14.2□□□□□ -0.14
ZNF540-210ENST00000592533 CUL4AQ13619 759 aa14.2□□□□□ -0.14
ZNF540-210ENST00000592533 PKP1Q13835 747 aa14.2□□□□□ -0.14
ZNF540-210ENST00000592533 MCTP1Q6DN14 999 aa14.2□□□□□ -0.14
ZNF540-210ENST00000592533 HOXC9P31274 260 aa14.19□□□□□ -0.14
ZNF540-210ENST00000592533 NASPP49321 788 aaPredicted RBP14.19□□□□□ -0.14
ZNF540-210ENST00000592533 ZGPATQ8N5A5 531 aaKnown RBP14.19□□□□□ -0.14
ZNF540-210ENST00000592533 SLC26A8Q96RN1 970 aa14.19□□□□□ -0.14
ZNF540-210ENST00000592533 EXOC6BQ9Y2D4 811 aa14.19□□□□□ -0.14
ZNF540-210ENST00000592533 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
ZNF540-210ENST00000592533 CEMIPQ8WUJ3 1361 aa14.18□□□□□ -0.14
ZNF540-210ENST00000592533 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
ZNF540-210ENST00000592533 CHMLP26374 656 aa14.18□□□□□ -0.14
ZNF540-210ENST00000592533 TRIM44Q96DX7 344 aaPredicted RBP14.18□□□□□ -0.14
ZNF540-210ENST00000592533 INTS4Q96HW7 963 aaKnown RBP14.18□□□□□ -0.14
ZNF540-210ENST00000592533 NFAT5O94916 1531 aa14.18□□□□□ -0.14
ZNF540-210ENST00000592533 FKBP5Q13451 457 aaPredicted RBP14.18□□□□□ -0.14
ZNF540-210ENST00000592533 ZSCAN23Q3MJ62 389 aa14.18□□□□□ -0.14
ZNF540-210ENST00000592533 MCCP23508 829 aa14.17□□□□□ -0.14
ZNF540-210ENST00000592533 IL17REQ8NFR9 667 aa14.17□□□□□ -0.14
ZNF540-210ENST00000592533 CHD2O14647 1828 aaKnown RBP14.17□□□□□ -0.14
ZNF540-210ENST00000592533 TAF7Q15545 349 aaPredicted RBP14.17□□□□□ -0.14
ZNF540-210ENST00000592533 SSH3Q8TE77 659 aa14.17□□□□□ -0.14
ZNF540-210ENST00000592533 TMX3Q96JJ7 454 aa14.17□□□□□ -0.14
ZNF540-210ENST00000592533 SOX12O15370 315 aa14.17□□□□□ -0.14
ZNF540-210ENST00000592533 HS1BP3Q53T59 392 aa14.16□□□□□ -0.14
ZNF540-210ENST00000592533 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
ZNF540-210ENST00000592533 POLA2Q14181 598 aa14.16□□□□□ -0.14
ZNF540-210ENST00000592533 RAB11FIP3O75154 756 aa14.15□□□□□ -0.14
ZNF540-210ENST00000592533 BRD1O95696 1058 aa14.15□□□□□ -0.14
ZNF540-210ENST00000592533 GPT2Q8TD30 523 aa14.15□□□□□ -0.14
ZNF540-210ENST00000592533 HOXB7P09629 217 aa14.15□□□□□ -0.14
ZNF540-210ENST00000592533 NEK4P51957 841 aa14.15□□□□□ -0.14
ZNF540-210ENST00000592533 NLRP6P59044 892 aa14.15□□□□□ -0.14
ZNF540-210ENST00000592533 CAVIN1Q6NZI2 390 aaKnown RBP14.15□□□□□ -0.14
ZNF540-210ENST00000592533 LRRFIP2Q9Y608 721 aaKnown RBP14.15□□□□□ -0.14
ZNF540-210ENST00000592533 RGPD2P0DJD1 1756 aa14.14□□□□□ -0.15
ZNF540-210ENST00000592533 PDLIM2Q96JY6 352 aa14.14□□□□□ -0.15
ZNF540-210ENST00000592533 ANP32BQ92688 251 aaKnown RBP14.14□□□□□ -0.15
ZNF540-210ENST00000592533 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
ZNF540-210ENST00000592533 ADGRL3Q9HAR2 1447 aa14.13□□□□□ -0.15
ZNF540-210ENST00000592533 SIPA1L3O60292 1781 aaPredicted RBP14.13□□□□□ -0.15
ZNF540-210ENST00000592533 PALD1Q9ULE6 856 aa14.13□□□□□ -0.15
ZNF540-210ENST00000592533 MBD3O95983 291 aa14.13□□□□□ -0.15
ZNF540-210ENST00000592533 UBTFL1P0CB47 393 aaPredicted RBP14.13□□□□□ -0.15
ZNF540-210ENST00000592533 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
ZNF540-210ENST00000592533 PRPF40AO75400 957 aaKnown RBP14.13□□□□□ -0.15
ZNF540-210ENST00000592533 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
ZNF540-210ENST00000592533 ZSCAN30Q86W11 494 aa14.13□□□□□ -0.15
ZNF540-210ENST00000592533 THEMISQ8N1K5 641 aaPredicted RBP14.13□□□□□ -0.15
ZNF540-210ENST00000592533 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
ZNF540-210ENST00000592533 OVOS2A0A0G2JMS6 1433 aa14.12□□□□□ -0.15
ZNF540-210ENST00000592533 NCAPD2Q15021 1401 aa14.12□□□□□ -0.15
ZNF540-210ENST00000592533 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
ZNF540-210ENST00000592533 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
ZNF540-210ENST00000592533 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
ZNF540-210ENST00000592533 HSPA4P34932 840 aa14.12□□□□□ -0.15
ZNF540-210ENST00000592533 TCHHQ07283 1943 aa14.11□□□□□ -0.15
ZNF540-210ENST00000592533 ADAMTS7Q9UKP4 1686 aa14.11□□□□□ -0.15
ZNF540-210ENST00000592533 HDGFL1Q5TGJ6 251 aa14.11□□□□□ -0.15
ZNF540-210ENST00000592533 LRSAM1Q6UWE0 723 aa14.11□□□□□ -0.15
ZNF540-210ENST00000592533 UNC5CLQ8IV45 518 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms