RNA–Protein interactions for RNA: ENST00000592442.1

LAMA3-213, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-213ENST00000592442 SLFNL1Q499Z3 407 aa7.29□□□□□ -1.24
LAMA3-213ENST00000592442 KDM6BO15054 1643 aa7.29□□□□□ -1.24
LAMA3-213ENST00000592442 SUPT6HQ7KZ85 1726 aaKnown RBP7.29□□□□□ -1.24
LAMA3-213ENST00000592442 LRRIQ1Q96JM4 1722 aa7.29□□□□□ -1.24
LAMA3-213ENST00000592442 NCOA2Q15596 1464 aa7.29□□□□□ -1.24
LAMA3-213ENST00000592442 TTC37Q6PGP7 1564 aa7.29□□□□□ -1.24
LAMA3-213ENST00000592442 NR3C2P08235 984 aa7.28□□□□□ -1.24
LAMA3-213ENST00000592442 WDR4P57081 412 aaKnown RBP7.28□□□□□ -1.24
LAMA3-213ENST00000592442 INTS6LQ5JSJ4 861 aaKnown RBP7.28□□□□□ -1.24
LAMA3-213ENST00000592442 RNF20Q5VTR2 975 aa7.28□□□□□ -1.24
LAMA3-213ENST00000592442 ESF1Q9H501 851 aaKnown RBP7.28□□□□□ -1.24
LAMA3-213ENST00000592442 SCAPERQ9BY12 1400 aa7.27□□□□□ -1.24
LAMA3-213ENST00000592442 MYO5CQ9NQX4 1742 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 TRAK2O60296 914 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 RAPGEF3O95398 923 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 TSPY4P0CV99 314 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 TSPY10P0CW01 314 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 PPP1R26Q5T8A7 1209 aaPredicted RBP7.27□□□□□ -1.25
LAMA3-213ENST00000592442 RNF135Q8IUD6 432 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 FNBP4Q8N3X1 1017 aaPredicted RBP7.27□□□□□ -1.25
LAMA3-213ENST00000592442 PGPEP1Q9NXJ5 209 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 CEP126Q9P2H0 1117 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 EMILIN1Q9Y6C2 1016 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 DENND4BO75064 1496 aaPredicted RBP7.27□□□□□ -1.25
LAMA3-213ENST00000592442 ARAP3Q8WWN8 1544 aa7.27□□□□□ -1.25
LAMA3-213ENST00000592442 GPATCH8Q9UKJ3 1502 aaKnown RBP7.27□□□□□ -1.25
LAMA3-213ENST00000592442 PLEKHH2Q8IVE3 1493 aa7.26□□□□□ -1.25
LAMA3-213ENST00000592442 AXIN1O15169 862 aa7.26□□□□□ -1.25
LAMA3-213ENST00000592442 CAPN5O15484 640 aaPredicted RBP7.26□□□□□ -1.25
LAMA3-213ENST00000592442 ZIC2O95409 532 aaPredicted RBP7.26□□□□□ -1.25
LAMA3-213ENST00000592442 HNRNPMP52272 730 aaKnown RBP eCLIP7.26□□□□□ -1.25
LAMA3-213ENST00000592442 FAM50AQ14320 339 aaKnown RBP7.26□□□□□ -1.25
LAMA3-213ENST00000592442 HDGFL1Q5TGJ6 251 aa7.26□□□□□ -1.25
LAMA3-213ENST00000592442 SEPT12Q8IYM1 358 aa7.26□□□□□ -1.25
LAMA3-213ENST00000592442 GLMNQ92990 594 aa7.26□□□□□ -1.25
LAMA3-213ENST00000592442 TRIM52Q96A61 297 aa7.26□□□□□ -1.25
LAMA3-213ENST00000592442 CALR3Q96L12 384 aaKnown RBP7.26□□□□□ -1.25
LAMA3-213ENST00000592442 ERVH48-1M5A8F1 160 aa7.25□□□□□ -1.25
LAMA3-213ENST00000592442 ITPKCQ96DU7 683 aa7.25□□□□□ -1.25
LAMA3-213ENST00000592442 PCDHB11Q9Y5F2 797 aa7.25□□□□□ -1.25
LAMA3-213ENST00000592442 MYOM3Q5VTT5 1437 aa7.25□□□□□ -1.25
LAMA3-213ENST00000592442 MIA2Q96PC5 1412 aa7.25□□□□□ -1.25
LAMA3-213ENST00000592442 ITSN2Q9NZM3 1697 aa7.25□□□□□ -1.25
LAMA3-213ENST00000592442 ESPNB1AK53 854 aa7.24□□□□□ -1.25
LAMA3-213ENST00000592442 ST8SIA5O15466 376 aa7.24□□□□□ -1.25
LAMA3-213ENST00000592442 CTC1Q2NKJ3 1217 aa7.24□□□□□ -1.25
LAMA3-213ENST00000592442 AFAP1Q8N556 730 aa7.24□□□□□ -1.25
LAMA3-213ENST00000592442 ZFAND3Q9H8U3 227 aa7.24□□□□□ -1.25
LAMA3-213ENST00000592442 CYLDQ9NQC7 956 aa7.24□□□□□ -1.25
LAMA3-213ENST00000592442 TMPRSS4Q9NRS4 437 aa7.24□□□□□ -1.25
LAMA3-213ENST00000592442 PPRC1Q5VV67 1664 aaKnown RBP7.24□□□□□ -1.25
LAMA3-213ENST00000592442 SPAG9O60271 1321 aaKnown RBP7.24□□□□□ -1.25
LAMA3-213ENST00000592442 ARID4BQ4LE39 1312 aaPredicted RBP7.24□□□□□ -1.25
LAMA3-213ENST00000592442 PREX2Q70Z35 1606 aa7.23□□□□□ -1.25
LAMA3-213ENST00000592442 AVPP01185 164 aa7.23□□□□□ -1.25
LAMA3-213ENST00000592442 TIMP2P16035 220 aa7.23□□□□□ -1.25
LAMA3-213ENST00000592442 MYT1Q01538 1121 aa7.23□□□□□ -1.25
LAMA3-213ENST00000592442 ZNF784Q8NCA9 323 aaPredicted RBP7.23□□□□□ -1.25
LAMA3-213ENST00000592442 ALG2Q9H553 416 aa7.23□□□□□ -1.25
LAMA3-213ENST00000592442 TIMELESSQ9UNS1 1208 aa7.23□□□□□ -1.25
LAMA3-213ENST00000592442 DOLKQ9UPQ8 538 aa7.23□□□□□ -1.25
LAMA3-213ENST00000592442 ZNF644Q9H582 1327 aaPredicted RBP7.23□□□□□ -1.25
LAMA3-213ENST00000592442 ZNF518AQ6AHZ1 1483 aa7.23□□□□□ -1.25
LAMA3-213ENST00000592442 POGZQ7Z3K3 1410 aa7.22□□□□□ -1.25
LAMA3-213ENST00000592442 KIAA1107Q9UPP5 1409 aa7.22□□□□□ -1.25
LAMA3-213ENST00000592442 UPP2O95045 317 aa7.22□□□□□ -1.25
LAMA3-213ENST00000592442 SKIP12755 728 aa7.22□□□□□ -1.25
LAMA3-213ENST00000592442 TRAF7Q6Q0C0 670 aa7.22□□□□□ -1.25
LAMA3-213ENST00000592442 CCDC125Q86Z20 511 aa7.22□□□□□ -1.25
LAMA3-213ENST00000592442 ADAMTS19Q8TE59 1207 aa7.22□□□□□ -1.25
LAMA3-213ENST00000592442 PIK3CDO00329 1044 aa7.21□□□□□ -1.26
LAMA3-213ENST00000592442 MYCP01106 439 aaPredicted RBP7.21□□□□□ -1.26
LAMA3-213ENST00000592442 OXLD1Q5BKU9 147 aa7.21□□□□□ -1.26
LAMA3-213ENST00000592442 CAMSAP2Q08AD1 1489 aa7.21□□□□□ -1.26
LAMA3-213ENST00000592442 MAGI2Q86UL8 1455 aa7.21□□□□□ -1.26
LAMA3-213ENST00000592442 COL17A1Q9UMD9 1497 aaPredicted RBP7.21□□□□□ -1.26
LAMA3-213ENST00000592442 ABCC1P33527 1531 aa7.21□□□□□ -1.26
LAMA3-213ENST00000592442 CDC42BPAQ5VT25 1732 aa7.21□□□□□ -1.26
LAMA3-213ENST00000592442 FGD6Q6ZV73 1430 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 BMP1P13497 986 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 ITGAEP38570 1179 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 CBLBQ13191 982 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 PLPP7Q8NBV4 271 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 CCDC85AQ96PX6 553 aaPredicted RBP7.2□□□□□ -1.26
LAMA3-213ENST00000592442 AAASQ9NRG9 546 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 CDC42BPBQ9Y5S2 1711 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 SYCP2Q9BX26 1530 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 SAMD9LQ8IVG5 1584 aa7.2□□□□□ -1.26
LAMA3-213ENST00000592442 TRAPPC8Q9Y2L5 1435 aa7.19□□□□□ -1.26
LAMA3-213ENST00000592442 CCDC141Q6ZP82 1450 aa7.19□□□□□ -1.26
LAMA3-213ENST00000592442 ZFYVE16Q7Z3T8 1539 aa7.19□□□□□ -1.26
LAMA3-213ENST00000592442 CC2D2BQ6DHV5 1058 aa7.19□□□□□ -1.26
LAMA3-213ENST00000592442 KLF16Q9BXK1 252 aaPredicted RBP7.19□□□□□ -1.26
LAMA3-213ENST00000592442 BMP2P12643 396 aa7.18□□□□□ -1.26
LAMA3-213ENST00000592442 SMCPP49901 116 aaPredicted RBP7.18□□□□□ -1.26
LAMA3-213ENST00000592442 RELBQ01201 579 aa7.18□□□□□ -1.26
LAMA3-213ENST00000592442 USP4Q13107 963 aa7.18□□□□□ -1.26
LAMA3-213ENST00000592442 SCARF1Q14162 830 aa7.18□□□□□ -1.26
LAMA3-213ENST00000592442 MAP7D1Q3KQU3 841 aa7.18□□□□□ -1.26
LAMA3-213ENST00000592442 C6orf118Q5T5N4 469 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms