RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
PRKCSH-215ENST00000592435 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
PRKCSH-215ENST00000592435 C5P01031 1676 aa13.08□□□□□ -0.31
PRKCSH-215ENST00000592435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-215ENST00000592435 CNGB1Q14028 1251 aaPredicted RBP13.08□□□□□ -0.32
PRKCSH-215ENST00000592435 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-215ENST00000592435 AMIGO3Q86WK7 504 aa13.07□□□□□ -0.32
PRKCSH-215ENST00000592435 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
PRKCSH-215ENST00000592435 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-215ENST00000592435 C4BP0C0L5 1744 aa13.07□□□□□ -0.32
PRKCSH-215ENST00000592435 COL24A1Q17RW2 1714 aa13.07□□□□□ -0.32
PRKCSH-215ENST00000592435 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-215ENST00000592435 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
PRKCSH-215ENST00000592435 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
PRKCSH-215ENST00000592435 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
PRKCSH-215ENST00000592435 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
PRKCSH-215ENST00000592435 U2SURPO15042 1029 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-215ENST00000592435 GNPATO15228 680 aa13.05□□□□□ -0.32
PRKCSH-215ENST00000592435 PHF14O94880 888 aa13.05□□□□□ -0.32
PRKCSH-215ENST00000592435 YY1P25490 414 aa13.05□□□□□ -0.32
PRKCSH-215ENST00000592435 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
PRKCSH-215ENST00000592435 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
PRKCSH-215ENST00000592435 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-215ENST00000592435 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-215ENST00000592435 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-215ENST00000592435 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
PRKCSH-215ENST00000592435 RTCBQ9Y3I0 505 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-215ENST00000592435 ZNF831Q5JPB2 1677 aa13.03□□□□□ -0.32
PRKCSH-215ENST00000592435 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
PRKCSH-215ENST00000592435 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
PRKCSH-215ENST00000592435 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
PRKCSH-215ENST00000592435 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
PRKCSH-215ENST00000592435 NUDCQ9Y266 331 aa13.03□□□□□ -0.32
PRKCSH-215ENST00000592435 CD2APQ9Y5K6 639 aa13.03□□□□□ -0.32
PRKCSH-215ENST00000592435 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
PRKCSH-215ENST00000592435 ADRA2BP18089 450 aa13.02□□□□□ -0.33
PRKCSH-215ENST00000592435 GPR162Q16538 588 aa13.01□□□□□ -0.33
PRKCSH-215ENST00000592435 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
PRKCSH-215ENST00000592435 NLGN2Q8NFZ4 835 aa13.01□□□□□ -0.33
PRKCSH-215ENST00000592435 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
PRKCSH-215ENST00000592435 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
PRKCSH-215ENST00000592435 UBR3Q6ZT12 1888 aa13□□□□□ -0.33
PRKCSH-215ENST00000592435 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
PRKCSH-215ENST00000592435 FCHSD2O94868 740 aa12.99□□□□□ -0.33
PRKCSH-215ENST00000592435 RFC4P35249 363 aa12.99□□□□□ -0.33
PRKCSH-215ENST00000592435 CRKLP46109 303 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-215ENST00000592435 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
PRKCSH-215ENST00000592435 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
PRKCSH-215ENST00000592435 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
PRKCSH-215ENST00000592435 MRC1P22897 1456 aa12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 INTS5Q6P9B9 1019 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 UTRNP46939 3433 aa12.98□□□□□ -0.33
PRKCSH-215ENST00000592435 ADAMTS7Q9UKP4 1686 aa12.97□□□□□ -0.33
PRKCSH-215ENST00000592435 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
PRKCSH-215ENST00000592435 MMP10P09238 476 aa12.97□□□□□ -0.33
PRKCSH-215ENST00000592435 GYS1P13807 737 aa12.97□□□□□ -0.33
PRKCSH-215ENST00000592435 TEFQ10587 303 aa12.97□□□□□ -0.33
PRKCSH-215ENST00000592435 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-215ENST00000592435 DNAJC10Q8IXB1 793 aa12.96□□□□□ -0.33
PRKCSH-215ENST00000592435 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-215ENST00000592435 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
PRKCSH-215ENST00000592435 ZNF790Q6PG37 636 aa12.95□□□□□ -0.34
PRKCSH-215ENST00000592435 COL5A3P25940 1745 aaPredicted RBP12.95□□□□□ -0.34
PRKCSH-215ENST00000592435 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
PRKCSH-215ENST00000592435 YBX3P16989 372 aaKnown RBP eCLIP12.94□□□□□ -0.348e-10■□□□□ 8.8
PRKCSH-215ENST00000592435 TTC5Q8N0Z6 440 aa12.94□□□□□ -0.34
PRKCSH-215ENST00000592435 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
PRKCSH-215ENST00000592435 GOLGB1Q14789 3259 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-215ENST00000592435 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
PRKCSH-215ENST00000592435 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
PRKCSH-215ENST00000592435 STARD3NLO95772 234 aa12.93□□□□□ -0.34
PRKCSH-215ENST00000592435 TGFB2P61812 414 aa12.93□□□□□ -0.34
PRKCSH-215ENST00000592435 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
PRKCSH-215ENST00000592435 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
PRKCSH-215ENST00000592435 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
PRKCSH-215ENST00000592435 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
PRKCSH-215ENST00000592435 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
PRKCSH-215ENST00000592435 RALBP1Q15311 655 aa12.92□□□□□ -0.34
PRKCSH-215ENST00000592435 ZNF784Q8NCA9 323 aaPredicted RBP12.92□□□□□ -0.34
PRKCSH-215ENST00000592435 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-215ENST00000592435 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
PRKCSH-215ENST00000592435 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-215ENST00000592435 TJP1Q07157 1748 aa12.91□□□□□ -0.34
PRKCSH-215ENST00000592435 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
PRKCSH-215ENST00000592435 ZPR1O75312 459 aa12.91□□□□□ -0.34
PRKCSH-215ENST00000592435 NEFMP07197 916 aa12.91□□□□□ -0.34
PRKCSH-215ENST00000592435 TM4SF1P30408 202 aa12.9□□□□□ -0.34
PRKCSH-215ENST00000592435 DDX10Q13206 875 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-215ENST00000592435 FKBP8Q14318 412 aa12.9□□□□□ -0.34
PRKCSH-215ENST00000592435 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
PRKCSH-215ENST00000592435 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-215ENST00000592435 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
PRKCSH-215ENST00000592435 ZBTB1Q9Y2K1 713 aa12.9□□□□□ -0.34
PRKCSH-215ENST00000592435 HEG1Q9ULI3 1381 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 284 ms