RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 CABP4P57796 275 aa21.27■■□□□ 1
PRKCSH-213ENST00000591510 NFATC2IPQ8NCF5 419 aa21.27■■□□□ 1
PRKCSH-213ENST00000591510 WDR43Q15061 677 aaKnown RBP eCLIP21.26■□□□□ 0.99
PRKCSH-213ENST00000591510 NFE2L2Q16236 605 aa21.26■□□□□ 0.99
PRKCSH-213ENST00000591510 SMARCC1Q92922 1105 aaPredicted RBP21.26■□□□□ 0.99
PRKCSH-213ENST00000591510 KCPQ6ZWJ8 1503 aa21.25■□□□□ 0.99
PRKCSH-213ENST00000591510 TUBGCP6Q96RT7 1819 aa21.25■□□□□ 0.99
PRKCSH-213ENST00000591510 HTATSF1O43719 755 aaKnown RBP21.25■□□□□ 0.99
PRKCSH-213ENST00000591510 KCNQ4P56696 695 aa21.25■□□□□ 0.99
PRKCSH-213ENST00000591510 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
PRKCSH-213ENST00000591510 SLC4A9Q96Q91 983 aa21.25■□□□□ 0.99
PRKCSH-213ENST00000591510 PNNQ9H307 717 aaKnown RBP21.24■□□□□ 0.99
PRKCSH-213ENST00000591510 COL5A3P25940 1745 aaPredicted RBP21.24■□□□□ 0.99
PRKCSH-213ENST00000591510 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
PRKCSH-213ENST00000591510 CASZ1Q86V15 1759 aa21.23■□□□□ 0.99
PRKCSH-213ENST00000591510 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
PRKCSH-213ENST00000591510 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
PRKCSH-213ENST00000591510 CCNL1Q9UK58 526 aaPredicted RBP21.23■□□□□ 0.99
PRKCSH-213ENST00000591510 TJP1Q07157 1748 aa21.23■□□□□ 0.99
PRKCSH-213ENST00000591510 SRCAPQ6ZRS2 3230 aa21.23■□□□□ 0.99
PRKCSH-213ENST00000591510 LOC102724428A0A0B4J2F2 783 aa21.22■□□□□ 0.99
PRKCSH-213ENST00000591510 SIK1P57059 783 aa21.22■□□□□ 0.99
PRKCSH-213ENST00000591510 AKT1S1Q96B36 256 aa21.22■□□□□ 0.99
PRKCSH-213ENST00000591510 RUNDC1Q96C34 613 aa21.22■□□□□ 0.99
PRKCSH-213ENST00000591510 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
PRKCSH-213ENST00000591510 MAPK8IP3Q9UPT6 1336 aa21.22■□□□□ 0.99
PRKCSH-213ENST00000591510 MCM10Q7L590 875 aa21.21■□□□□ 0.99
PRKCSH-213ENST00000591510 C4BP0C0L5 1744 aa21.21■□□□□ 0.99
PRKCSH-213ENST00000591510 TMPOP42166 694 aaKnown RBP21.2■□□□□ 0.98
PRKCSH-213ENST00000591510 ITPK1Q13572 414 aa21.2■□□□□ 0.98
PRKCSH-213ENST00000591510 DCTN1Q14203 1278 aa21.2■□□□□ 0.98
PRKCSH-213ENST00000591510 R3HDM1Q15032 1099 aaKnown RBP21.2■□□□□ 0.98
PRKCSH-213ENST00000591510 PSDA5PKW4 1024 aaPredicted RBP21.19■□□□□ 0.98
PRKCSH-213ENST00000591510 SLC39A6Q13433 755 aa21.18■□□□□ 0.98
PRKCSH-213ENST00000591510 SLC15A2Q16348 729 aa21.18■□□□□ 0.98
PRKCSH-213ENST00000591510 NBPF14Q5TI25 921 aa21.18■□□□□ 0.98
PRKCSH-213ENST00000591510 KDM3BQ7LBC6 1761 aa21.18■□□□□ 0.98
PRKCSH-213ENST00000591510 UBR3Q6ZT12 1888 aa21.18■□□□□ 0.98
PRKCSH-213ENST00000591510 NEFMP07197 916 aa21.17■□□□□ 0.98
PRKCSH-213ENST00000591510 LINC00116Q8NCU8 138 aa21.17■□□□□ 0.98
PRKCSH-213ENST00000591510 MYH14Q7Z406 1995 aaKnown RBP21.17■□□□□ 0.98
PRKCSH-213ENST00000591510 TEFQ10587 303 aa21.16■□□□□ 0.98
PRKCSH-213ENST00000591510 TRIM35Q9UPQ4 493 aa21.16■□□□□ 0.98
PRKCSH-213ENST00000591510 RIPK4P57078 832 aa21.15■□□□□ 0.98
PRKCSH-213ENST00000591510 RTF1Q92541 710 aaKnown RBP21.15■□□□□ 0.98
PRKCSH-213ENST00000591510 THUMPD2Q9BTF0 503 aaKnown RBP21.15■□□□□ 0.98
PRKCSH-213ENST00000591510 STK32BQ9NY57 414 aa21.15■□□□□ 0.98
PRKCSH-213ENST00000591510 RRP7AQ9Y3A4 280 aaKnown RBP21.15■□□□□ 0.98
PRKCSH-213ENST00000591510 AMIGO3Q86WK7 504 aa21.14■□□□□ 0.97
PRKCSH-213ENST00000591510 PDGFDQ9GZP0 370 aaPredicted RBP21.14■□□□□ 0.97
PRKCSH-213ENST00000591510 KCNQ3O43525 872 aa21.13■□□□□ 0.97
PRKCSH-213ENST00000591510 PTCD1O75127 700 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-213ENST00000591510 ATP6V1AP38606 617 aa21.13■□□□□ 0.97
PRKCSH-213ENST00000591510 ZNF790Q6PG37 636 aa21.13■□□□□ 0.97
PRKCSH-213ENST00000591510 PNPLA7Q6ZV29 1317 aa21.12■□□□□ 0.97
PRKCSH-213ENST00000591510 APAF1O14727 1248 aa21.12■□□□□ 0.97
PRKCSH-213ENST00000591510 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
PRKCSH-213ENST00000591510 RBM42Q9BTD8 480 aaKnown RBP21.12■□□□□ 0.97
PRKCSH-213ENST00000591510 LRP5O75197 1615 aa21.11■□□□□ 0.97
PRKCSH-213ENST00000591510 ZNF496Q96IT1 587 aaPredicted RBP21.11■□□□□ 0.97
PRKCSH-213ENST00000591510 COL24A1Q17RW2 1714 aa21.1■□□□□ 0.97
PRKCSH-213ENST00000591510 BTBD11A6QL63 1104 aa21.1■□□□□ 0.97
PRKCSH-213ENST00000591510 TAF7Q15545 349 aaPredicted RBP21.1■□□□□ 0.97
PRKCSH-213ENST00000591510 VSIG10Q8N0Z9 540 aa21.1■□□□□ 0.97
PRKCSH-213ENST00000591510 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
PRKCSH-213ENST00000591510 CNTNAP4Q9C0A0 1308 aa21.09■□□□□ 0.97
PRKCSH-213ENST00000591510 CCER2I3L3R5 266 aa21.09■□□□□ 0.97
PRKCSH-213ENST00000591510 LMOD3Q0VAK6 560 aa21.09■□□□□ 0.97
PRKCSH-213ENST00000591510 RC3H1Q5TC82 1133 aaKnown RBP21.08■□□□□ 0.97
PRKCSH-213ENST00000591510 DNAJC10Q8IXB1 793 aa21.08■□□□□ 0.97
PRKCSH-213ENST00000591510 NEUROD2Q15784 382 aa21.07■□□□□ 0.96
PRKCSH-213ENST00000591510 HMGB2P26583 209 aaKnown RBP21.06■□□□□ 0.96
PRKCSH-213ENST00000591510 TTC5Q8N0Z6 440 aa21.06■□□□□ 0.96
PRKCSH-213ENST00000591510 MIS18AQ9NYP9 233 aa21.06■□□□□ 0.96
PRKCSH-213ENST00000591510 CYP19A1P11511 503 aaPredicted RBP21.05■□□□□ 0.96
PRKCSH-213ENST00000591510 CRKLP46109 303 aaKnown RBP21.05■□□□□ 0.96
PRKCSH-213ENST00000591510 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
PRKCSH-213ENST00000591510 TFCP2L1Q9NZI6 479 aa21.05■□□□□ 0.96
PRKCSH-213ENST00000591510 C4AP0C0L4 1744 aa21.04■□□□□ 0.96
PRKCSH-213ENST00000591510 INTS5Q6P9B9 1019 aaKnown RBP21.04■□□□□ 0.96
PRKCSH-213ENST00000591510 SMIM5Q71RC9 77 aa21.04■□□□□ 0.96
PRKCSH-213ENST00000591510 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
PRKCSH-213ENST00000591510 FMNL2Q96PY5 1086 aa21.04■□□□□ 0.96
PRKCSH-213ENST00000591510 LAMB4A4D0S4 1761 aa21.04■□□□□ 0.96
PRKCSH-213ENST00000591510 SSFA2P28290 1259 aa21.03■□□□□ 0.96
PRKCSH-213ENST00000591510 MIER1Q8N108 512 aa21.03■□□□□ 0.96
PRKCSH-213ENST00000591510 AK7Q96M32 723 aa21.03■□□□□ 0.96
PRKCSH-213ENST00000591510 BABAM1Q9NWV8 329 aa21.03■□□□□ 0.96
PRKCSH-213ENST00000591510 CHL1O00533 1208 aa21.02■□□□□ 0.96
PRKCSH-213ENST00000591510 GNPATO15228 680 aa21.02■□□□□ 0.96
PRKCSH-213ENST00000591510 ZNF853P0CG23 659 aa21.02■□□□□ 0.96
PRKCSH-213ENST00000591510 EIF4A1P60842 406 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-213ENST00000591510 CCDC27Q2M243 656 aa21.02■□□□□ 0.96
PRKCSH-213ENST00000591510 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
PRKCSH-213ENST00000591510 SGIP1Q9BQI5 828 aa21.02■□□□□ 0.96
PRKCSH-213ENST00000591510 PRAMEF22A3QJZ6 481 aa21.01■□□□□ 0.95
PRKCSH-213ENST00000591510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
PRKCSH-213ENST00000591510 RPS6KA4O75676 772 aa21■□□□□ 0.95
PRKCSH-213ENST00000591510 CCDC87Q9NVE4 849 aa21■□□□□ 0.95
PRKCSH-213ENST00000591510 SOS1Q07889 1333 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms