RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SLC4A9Q96Q91 983 aa15.38■□□□□ 0.05
VMP1-211ENST00000591315 ITPK1Q13572 414 aa15.37■□□□□ 0.05
VMP1-211ENST00000591315 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
VMP1-211ENST00000591315 SMARCC1Q92922 1105 aaPredicted RBP15.37■□□□□ 0.05
VMP1-211ENST00000591315 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 TAF1LQ8IZX4 1826 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 TUBGCP6Q96RT7 1819 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 ADAMTS7Q9UKP4 1686 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 LOC102724428A0A0B4J2F2 783 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 SIK1P57059 783 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 AMIGO3Q86WK7 504 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 PLEKHF1Q96S99 279 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 SLC52A2Q9HAB3 445 aa15.36■□□□□ 0.05
VMP1-211ENST00000591315 CASZ1Q86V15 1759 aa15.35■□□□□ 0.05
VMP1-211ENST00000591315 GNAT3A8MTJ3 354 aa15.35■□□□□ 0.05
VMP1-211ENST00000591315 DCTN1Q14203 1278 aa15.35■□□□□ 0.05
VMP1-211ENST00000591315 LINC00116Q8NCU8 138 aa15.35■□□□□ 0.05
VMP1-211ENST00000591315 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
VMP1-211ENST00000591315 PTCD1O75127 700 aaKnown RBP15.34■□□□□ 0.05
VMP1-211ENST00000591315 ZBTB7AO95365 584 aa15.34■□□□□ 0.05
VMP1-211ENST00000591315 MCM10Q7L590 875 aa15.34■□□□□ 0.05
VMP1-211ENST00000591315 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
VMP1-211ENST00000591315 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
VMP1-211ENST00000591315 C5P01031 1676 aa15.34■□□□□ 0.05
VMP1-211ENST00000591315 MRC1P22897 1456 aa15.33■□□□□ 0.05
VMP1-211ENST00000591315 ATP6V1AP38606 617 aa15.33■□□□□ 0.04
VMP1-211ENST00000591315 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.04
VMP1-211ENST00000591315 TFCP2L1Q9NZI6 479 aa15.32■□□□□ 0.04
VMP1-211ENST00000591315 ADAMTS8Q9UP79 889 aa15.32■□□□□ 0.04
VMP1-211ENST00000591315 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
VMP1-211ENST00000591315 PNPLA7Q6ZV29 1317 aa15.32■□□□□ 0.04
VMP1-211ENST00000591315 KCNQ3O43525 872 aa15.31■□□□□ 0.04
VMP1-211ENST00000591315 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
VMP1-211ENST00000591315 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
VMP1-211ENST00000591315 SIPA1L3O60292 1781 aaPredicted RBP15.3■□□□□ 0.04
VMP1-211ENST00000591315 MYH14Q7Z406 1995 aaKnown RBP15.3■□□□□ 0.04
VMP1-211ENST00000591315 COL23A1Q86Y22 540 aaPredicted RBP15.3■□□□□ 0.04
VMP1-211ENST00000591315 CEMIPQ8WUJ3 1361 aa15.3■□□□□ 0.04
VMP1-211ENST00000591315 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
VMP1-211ENST00000591315 RRP7AQ9Y3A4 280 aaKnown RBP15.29■□□□□ 0.04
VMP1-211ENST00000591315 KCPQ6ZWJ8 1503 aa15.28■□□□□ 0.04
VMP1-211ENST00000591315 ANP32CO43423 234 aa15.28■□□□□ 0.04
VMP1-211ENST00000591315 TEFQ10587 303 aa15.28■□□□□ 0.04
VMP1-211ENST00000591315 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
VMP1-211ENST00000591315 DNAJC10Q8IXB1 793 aa15.28■□□□□ 0.04
VMP1-211ENST00000591315 LRP5O75197 1615 aa15.28■□□□□ 0.04
VMP1-211ENST00000591315 UBR3Q6ZT12 1888 aa15.27■□□□□ 0.04
VMP1-211ENST00000591315 MAPK8IP3Q9UPT6 1336 aa15.27■□□□□ 0.04
VMP1-211ENST00000591315 TJP1Q07157 1748 aa15.27■□□□□ 0.04
VMP1-211ENST00000591315 QSER1Q2KHR3 1735 aa15.27■□□□□ 0.04
VMP1-211ENST00000591315 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
VMP1-211ENST00000591315 PHF14O94880 888 aa15.27■□□□□ 0.04
VMP1-211ENST00000591315 AK7Q96M32 723 aa15.27■□□□□ 0.04
VMP1-211ENST00000591315 MIS18AQ9NYP9 233 aa15.27■□□□□ 0.04
VMP1-211ENST00000591315 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
VMP1-211ENST00000591315 PTGER2P43116 358 aa15.26■□□□□ 0.03
VMP1-211ENST00000591315 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
VMP1-211ENST00000591315 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
VMP1-211ENST00000591315 SPON1Q9HCB6 807 aa15.26■□□□□ 0.03
VMP1-211ENST00000591315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.25■□□□□ 0.03
VMP1-211ENST00000591315 GNPATO15228 680 aa15.25■□□□□ 0.03
VMP1-211ENST00000591315 NEFMP07197 916 aa15.25■□□□□ 0.03
VMP1-211ENST00000591315 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
VMP1-211ENST00000591315 NEUROD2Q15784 382 aa15.25■□□□□ 0.03
VMP1-211ENST00000591315 UBR2Q8IWV8 1755 aa15.25■□□□□ 0.03
VMP1-211ENST00000591315 ZNF831Q5JPB2 1677 aa15.25■□□□□ 0.03
VMP1-211ENST00000591315 BTBD11A6QL63 1104 aa15.24■□□□□ 0.03
VMP1-211ENST00000591315 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
VMP1-211ENST00000591315 RIPK4P57078 832 aa15.24■□□□□ 0.03
VMP1-211ENST00000591315 MSL1Q68DK7 614 aa15.24■□□□□ 0.03
VMP1-211ENST00000591315 ZNF790Q6PG37 636 aa15.24■□□□□ 0.03
VMP1-211ENST00000591315 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
VMP1-211ENST00000591315 INTS5Q6P9B9 1019 aaKnown RBP15.23■□□□□ 0.03
VMP1-211ENST00000591315 RUNDC1Q96C34 613 aa15.23■□□□□ 0.03
VMP1-211ENST00000591315 SGIP1Q9BQI5 828 aa15.23■□□□□ 0.03
VMP1-211ENST00000591315 MTFR1LQ9H019 292 aa15.23■□□□□ 0.03
VMP1-211ENST00000591315 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
VMP1-211ENST00000591315 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
VMP1-211ENST00000591315 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
VMP1-211ENST00000591315 CYP19A1P11511 503 aaPredicted RBP15.22■□□□□ 0.03
VMP1-211ENST00000591315 TTC5Q8N0Z6 440 aa15.22■□□□□ 0.03
VMP1-211ENST00000591315 PNISRQ8TF01 805 aaKnown RBP15.22■□□□□ 0.03
VMP1-211ENST00000591315 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.03
VMP1-211ENST00000591315 TAF7Q15545 349 aaPredicted RBP15.21■□□□□ 0.03
VMP1-211ENST00000591315 RC3H1Q5TC82 1133 aaKnown RBP15.21■□□□□ 0.03
VMP1-211ENST00000591315 TRIM35Q9UPQ4 493 aa15.21■□□□□ 0.03
VMP1-211ENST00000591315 APAF1O14727 1248 aa15.2■□□□□ 0.02
VMP1-211ENST00000591315 HEG1Q9ULI3 1381 aa15.2■□□□□ 0.02
VMP1-211ENST00000591315 CICQ96RK0 1608 aaPredicted RBP15.19■□□□□ 0.02
VMP1-211ENST00000591315 RPS6KA4O75676 772 aa15.19■□□□□ 0.02
VMP1-211ENST00000591315 SSFA2P28290 1259 aa15.19■□□□□ 0.02
VMP1-211ENST00000591315 SLC16A10Q8TF71 515 aa15.19■□□□□ 0.02
VMP1-211ENST00000591315 ARHGEF1Q92888 912 aaKnown RBP15.19■□□□□ 0.02
VMP1-211ENST00000591315 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
VMP1-211ENST00000591315 PPP1R1BQ9UD71 204 aaPredicted RBP15.19■□□□□ 0.02
VMP1-211ENST00000591315 ZBTB1Q9Y2K1 713 aa15.19■□□□□ 0.02
VMP1-211ENST00000591315 RTCBQ9Y3I0 505 aaKnown RBP15.19■□□□□ 0.02
VMP1-211ENST00000591315 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
VMP1-211ENST00000591315 FMNL2Q96PY5 1086 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms