RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 XIRP1Q702N8 1843 aaKnown RBP25.48■■□□□ 1.67
GCDH-214ENST00000591043 SIRT2Q8IXJ6 389 aa25.47■■□□□ 1.67
GCDH-214ENST00000591043 C1orf115Q9H7X2 142 aa25.47■■□□□ 1.67
GCDH-214ENST00000591043 ATP10DQ9P241 1426 aa25.47■■□□□ 1.67
GCDH-214ENST00000591043 ADAMTS7Q9UKP4 1686 aa25.47■■□□□ 1.67
GCDH-214ENST00000591043 ANKRD45Q5TZF3 282 aa25.46■■□□□ 1.67
GCDH-214ENST00000591043 DCTPP1Q9H773 170 aa25.46■■□□□ 1.67
GCDH-214ENST00000591043 TEFQ10587 303 aa25.46■■□□□ 1.67
GCDH-214ENST00000591043 CRYBG1Q9Y4K1 1723 aa25.45■■□□□ 1.67
GCDH-214ENST00000591043 ERBB3P21860 1342 aa25.45■■□□□ 1.66
GCDH-214ENST00000591043 HMMRO75330 724 aa25.45■■□□□ 1.66
GCDH-214ENST00000591043 BMP2KLQ5H9B9 411 aa25.45■■□□□ 1.66
GCDH-214ENST00000591043 LRRC59Q96AG4 307 aaKnown RBP25.45■■□□□ 1.66
GCDH-214ENST00000591043 LNPKQ9C0E8 428 aa25.45■■□□□ 1.66
GCDH-214ENST00000591043 COL18A1P39060 1754 aa25.45■■□□□ 1.66
GCDH-214ENST00000591043 FLIIQ13045 1269 aa25.44■■□□□ 1.66
GCDH-214ENST00000591043 PXDNQ92626 1479 aa25.44■■□□□ 1.66
GCDH-214ENST00000591043 SIPA1L3O60292 1781 aaPredicted RBP25.43■■□□□ 1.66
GCDH-214ENST00000591043 BECN1Q14457 450 aa25.43■■□□□ 1.66
GCDH-214ENST00000591043 TBC1D32Q96NH3 1257 aa25.43■■□□□ 1.66
GCDH-214ENST00000591043 CEP85Q6P2H3 762 aa25.42■■□□□ 1.66
GCDH-214ENST00000591043 GNAI3P08754 354 aa25.41■■□□□ 1.66
GCDH-214ENST00000591043 EIF4A1P60842 406 aaKnown RBP25.41■■□□□ 1.66
GCDH-214ENST00000591043 HDGFL1Q5TGJ6 251 aa25.41■■□□□ 1.66
GCDH-214ENST00000591043 G2E3Q7L622 706 aa25.41■■□□□ 1.66
GCDH-214ENST00000591043 RNMTO43148 476 aaKnown RBP25.4■■□□□ 1.66
GCDH-214ENST00000591043 SEC24BO95487 1268 aa25.4■■□□□ 1.66
GCDH-214ENST00000591043 FKBP5Q13451 457 aaPredicted RBP25.4■■□□□ 1.66
GCDH-214ENST00000591043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.4■■□□□ 1.66
GCDH-214ENST00000591043 CPDO75976 1380 aa25.4■■□□□ 1.66
GCDH-214ENST00000591043 SPATA31A3Q5VYP0 1347 aa25.39■■□□□ 1.66
GCDH-214ENST00000591043 AXIN2Q9Y2T1 843 aa25.39■■□□□ 1.65
GCDH-214ENST00000591043 BTBD11A6QL63 1104 aa25.38■■□□□ 1.65
GCDH-214ENST00000591043 GNAI2P04899 355 aa25.38■■□□□ 1.65
GCDH-214ENST00000591043 MEIS3Q99687 375 aa25.38■■□□□ 1.65
GCDH-214ENST00000591043 LGR6Q9HBX8 967 aa25.38■■□□□ 1.65
GCDH-214ENST00000591043 SLC4A10Q6U841 1118 aa25.37■■□□□ 1.65
GCDH-214ENST00000591043 RAPGEF4Q8WZA2 1011 aa25.37■■□□□ 1.65
GCDH-214ENST00000591043 SCN11AQ9UI33 1791 aa25.37■■□□□ 1.65
GCDH-214ENST00000591043 ZC3H6P61129 1189 aaKnown RBP25.36■■□□□ 1.65
GCDH-214ENST00000591043 USP35Q9P2H5 1018 aa25.34■■□□□ 1.65
GCDH-214ENST00000591043 SPG7Q9UQ90 795 aa25.34■■□□□ 1.65
GCDH-214ENST00000591043 TATP17735 454 aaPredicted RBP25.33■■□□□ 1.65
GCDH-214ENST00000591043 F6X3S4 739 aa25.33■■□□□ 1.65
GCDH-214ENST00000591043 MPRIPQ6WCQ1 1025 aa25.33■■□□□ 1.65
GCDH-214ENST00000591043 PKD1L3Q7Z443 1732 aa25.32■■□□□ 1.64
GCDH-214ENST00000591043 HEG1Q9ULI3 1381 aa25.31■■□□□ 1.64
GCDH-214ENST00000591043 C22orf23Q9BZE7 217 aa25.31■■□□□ 1.64
GCDH-214ENST00000591043 PIP4K2BP78356 416 aa25.3■■□□□ 1.64
GCDH-214ENST00000591043 RTL5Q5HYW3 569 aaPredicted RBP25.3■■□□□ 1.64
GCDH-214ENST00000591043 NLRP2Q9NX02 1062 aa25.3■■□□□ 1.64
GCDH-214ENST00000591043 BRINP3Q76B58 766 aa25.29■■□□□ 1.64
GCDH-214ENST00000591043 DBF4Q9UBU7 674 aaPredicted RBP25.29■■□□□ 1.64
GCDH-214ENST00000591043 PLEKHG5O94827 1062 aa25.28■■□□□ 1.64
GCDH-214ENST00000591043 PLEKHM2Q8IWE5 1019 aa25.28■■□□□ 1.64
GCDH-214ENST00000591043 HSP90AB1P08238 724 aaKnown RBP25.27■■□□□ 1.64
GCDH-214ENST00000591043 MFAP1P55081 439 aaKnown RBP25.27■■□□□ 1.64
GCDH-214ENST00000591043 NECTIN2Q92692 538 aa25.27■■□□□ 1.64
GCDH-214ENST00000591043 CSB-PGBD3P0DP91 1061 aa25.26■■□□□ 1.63
GCDH-214ENST00000591043 HSPA1LP34931 641 aa25.26■■□□□ 1.63
GCDH-214ENST00000591043 PARP4Q9UKK3 1724 aaKnown RBP25.26■■□□□ 1.63
GCDH-214ENST00000591043 SOS2Q07890 1332 aaPredicted RBP25.26■■□□□ 1.63
GCDH-214ENST00000591043 CDC45O75419 566 aa25.26■■□□□ 1.63
GCDH-214ENST00000591043 ATP8B2P98198 1209 aa25.26■■□□□ 1.63
GCDH-214ENST00000591043 SRCIN1Q9C0H9 1055 aa25.26■■□□□ 1.63
GCDH-214ENST00000591043 HDAC5Q9UQL6 1122 aa25.26■■□□□ 1.63
GCDH-214ENST00000591043 MRC1P22897 1456 aa25.25■■□□□ 1.63
GCDH-214ENST00000591043 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
GCDH-214ENST00000591043 RBM25P49756 843 aaKnown RBP25.25■■□□□ 1.63
GCDH-214ENST00000591043 IFNL2Q8IZJ0 200 aa25.25■■□□□ 1.63
GCDH-214ENST00000591043 DDX17Q92841 729 aaKnown RBP25.25■■□□□ 1.63
GCDH-214ENST00000591043 GIGYF1O75420 1035 aaPredicted RBP25.24■■□□□ 1.63
GCDH-214ENST00000591043 UBTFL1P0CB47 393 aaPredicted RBP25.24■■□□□ 1.63
GCDH-214ENST00000591043 TTC22Q5TAA0 569 aa25.24■■□□□ 1.63
GCDH-214ENST00000591043 CHPF2Q9P2E5 772 aa25.23■■□□□ 1.63
GCDH-214ENST00000591043 PHKG2P15735 406 aa25.23■■□□□ 1.63
GCDH-214ENST00000591043 DNAAF4Q8WXU2 420 aa25.23■■□□□ 1.63
GCDH-214ENST00000591043 SLAIN2Q9P270 581 aa25.23■■□□□ 1.63
GCDH-214ENST00000591043 MEGF6O75095 1541 aa25.22■■□□□ 1.63
GCDH-214ENST00000591043 PHAXQ9H814 394 aaKnown RBP25.22■■□□□ 1.63
GCDH-214ENST00000591043 HYPKQ9NX55 129 aa25.22■■□□□ 1.63
GCDH-214ENST00000591043 NBR1Q14596 966 aa25.21■■□□□ 1.63
GCDH-214ENST00000591043 USP44Q9H0E7 712 aa25.21■■□□□ 1.63
GCDH-214ENST00000591043 OSBPL3Q9H4L5 887 aa25.21■■□□□ 1.63
GCDH-214ENST00000591043 SLC52A2Q9HAB3 445 aa25.21■■□□□ 1.63
GCDH-214ENST00000591043 ABCA3Q99758 1704 aa25.21■■□□□ 1.63
GCDH-214ENST00000591043 KCNQ3O43525 872 aa25.21■■□□□ 1.63
GCDH-214ENST00000591043 DCAF5Q96JK2 942 aa25.21■■□□□ 1.63
GCDH-214ENST00000591043 NHSL1Q5SYE7 1610 aa25.2■■□□□ 1.63
GCDH-214ENST00000591043 IBTKQ9P2D0 1353 aaPredicted RBP25.2■■□□□ 1.63
GCDH-214ENST00000591043 KDM6AO15550 1401 aaPredicted RBP25.2■■□□□ 1.62
GCDH-214ENST00000591043 CASC1Q6TDU7 716 aa25.2■■□□□ 1.62
GCDH-214ENST00000591043 SLC4A3P48751 1232 aa25.19■■□□□ 1.62
GCDH-214ENST00000591043 ALDH1L1O75891 902 aa25.18■■□□□ 1.62
GCDH-214ENST00000591043 TBC1D9Q6ZT07 1266 aa25.18■■□□□ 1.62
GCDH-214ENST00000591043 CABLES1Q8TDN4 633 aa25.18■■□□□ 1.62
GCDH-214ENST00000591043 DDX58O95786 925 aaKnown RBP25.18■■□□□ 1.62
GCDH-214ENST00000591043 BEND3Q5T5X7 828 aa25.18■■□□□ 1.62
GCDH-214ENST00000591043 LRRCC1Q9C099 1032 aa25.18■■□□□ 1.62
GCDH-214ENST00000591043 DEKP35659 375 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms