RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 C10orf67Q8IYJ2 551 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 HDAC5Q9UQL6 1122 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 ABCA8O94911 1581 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 ZSCAN25Q6NSZ9 544 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 MED14O60244 1454 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 CD109Q6YHK3 1445 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 FIBPO43427 364 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 MMP14P50281 582 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 UBE2HP62256 183 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 DHX37Q8IY37 1157 aaKnown RBP9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 WDR33Q9C0J8 1336 aaKnown RBP9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 ATAD2Q6PL18 1390 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 ADGRB2O60241 1585 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 ERC2O15083 957 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 POLR3GO15318 223 aaPredicted RBP9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 BRD2P25440 801 aaKnown RBP9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 PSEN1P49768 467 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 BMS1Q14692 1282 aaKnown RBP9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 KRBA2Q6ZNG9 492 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 TMEM87AQ8NBN3 555 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 LCMT1Q9UIC8 334 aa9.22□□□□□ -0.93
NEDD4L-229ENST00000590506 USP27XA6NNY8 438 aa9.21□□□□□ -0.93
NEDD4L-229ENST00000590506 LUZP1Q86V48 1076 aa9.21□□□□□ -0.93
NEDD4L-229ENST00000590506 SLC12A5Q9H2X9 1139 aa9.21□□□□□ -0.93
NEDD4L-229ENST00000590506 POLKQ9UBT6 870 aa9.21□□□□□ -0.93
NEDD4L-229ENST00000590506 ERBB3P21860 1342 aa9.21□□□□□ -0.93
NEDD4L-229ENST00000590506 TTC37Q6PGP7 1564 aa9.21□□□□□ -0.93
NEDD4L-229ENST00000590506 RPAP1Q9BWH6 1393 aaPredicted RBP9.21□□□□□ -0.93
NEDD4L-229ENST00000590506 IFT140Q96RY7 1462 aa9.21□□□□□ -0.94
NEDD4L-229ENST00000590506 MCM2P49736 904 aa9.21□□□□□ -0.94
NEDD4L-229ENST00000590506 ALDH1L2Q3SY69 923 aa9.21□□□□□ -0.94
NEDD4L-229ENST00000590506 ERO1AQ96HE7 468 aa9.21□□□□□ -0.94
NEDD4L-229ENST00000590506 INTS4Q96HW7 963 aaKnown RBP9.21□□□□□ -0.94
NEDD4L-229ENST00000590506 PALD1Q9ULE6 856 aa9.21□□□□□ -0.94
NEDD4L-229ENST00000590506 MAST1Q9Y2H9 1570 aa9.21□□□□□ -0.94
NEDD4L-229ENST00000590506 APPP05067 770 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 PRR29P0C7W0 189 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 CACTINQ8WUQ7 758 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 MYO1CO00159 1063 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 PLA2G4AP47712 749 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 TRIM5Q9C035 493 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 FHOD1Q9Y613 1164 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 UHRF1BP1LA0JNW5 1464 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 DUOX2Q9NRD8 1548 aa9.2□□□□□ -0.94
NEDD4L-229ENST00000590506 CCDC192P0DO97 292 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 SLFNL1Q499Z3 407 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 UPF3BQ9BZI7 483 aaKnown RBP9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 TOMM22Q9NS69 142 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 ARHGAP5Q13017 1502 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 CDC42BPBQ9Y5S2 1711 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 SLU7O95391 586 aaKnown RBP9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 CASQ1P31415 396 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 ST5P78524 1137 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 PTPN14Q15678 1187 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 TEX35Q5T0J7 233 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 ICE2Q659A1 982 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 TXLNBQ8N3L3 684 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 CCDC191Q8NCU4 936 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 FAM200AQ8TCP9 573 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 DCTPP1Q9H773 170 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 CHMP3Q9Y3E7 222 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 LRRFIP2Q9Y608 721 aaKnown RBP9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 ERCC6Q03468 1493 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 MRC2Q9UBG0 1479 aa9.19□□□□□ -0.94
NEDD4L-229ENST00000590506 PTPRCP08575 1304 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 PNMA6AP0CW24 399 aaPredicted RBP9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 ZNF75DP51815 510 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 ERCC6LQ2NKX8 1250 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 CCDC144BQ3MJ40 725 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 MUM1L1Q5H9M0 696 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 CCDC144CPQ8IYA2 1237 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 MRPL50Q8N5N7 158 aaKnown RBP9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 PLEKHF1Q96S99 279 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 EXOC6BQ9Y2D4 811 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 YEATS2Q9ULM3 1422 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 IL16Q14005 1332 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 DTNBO60941 627 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 ZSCAN22P10073 491 aaPredicted RBP9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 CLCN6P51797 869 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 CAMK4Q16566 473 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 SMARCE1Q969G3 411 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 TRMT1Q9NXH9 659 aaKnown RBP9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 MRVI1Q9Y6F6 885 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 PREX2Q70Z35 1606 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 ADGRL1O94910 1474 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 ELL2O00472 640 aaPredicted RBP9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 ARID5BQ14865 1188 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 LRRN4CLQ8ND94 238 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 CLIP2Q9UDT6 1046 aa9.18□□□□□ -0.94
NEDD4L-229ENST00000590506 SPHKAPQ2M3C7 1700 aa9.17□□□□□ -0.94
NEDD4L-229ENST00000590506 KNDC1Q76NI1 1749 aa9.17□□□□□ -0.94
NEDD4L-229ENST00000590506 ADGRF5Q8IZF2 1346 aa9.17□□□□□ -0.94
NEDD4L-229ENST00000590506 H2AFXP16104 143 aaPredicted RBP9.17□□□□□ -0.94
NEDD4L-229ENST00000590506 TYRO3Q06418 890 aa9.17□□□□□ -0.94
NEDD4L-229ENST00000590506 EP400NLQ6ZTU2 488 aa9.17□□□□□ -0.94
NEDD4L-229ENST00000590506 CBX8Q9HC52 389 aa9.17□□□□□ -0.94
NEDD4L-229ENST00000590506 PTPRTO14522 1441 aa9.17□□□□□ -0.94
NEDD4L-229ENST00000590506 CCDC171Q6TFL3 1326 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms