RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CABP4P57796 275 aa15.81■□□□□ 0.12
APOC1-206ENST00000590334 TEFQ10587 303 aa15.81■□□□□ 0.12
APOC1-206ENST00000590334 ILDR2Q71H61 639 aa15.81■□□□□ 0.12
APOC1-206ENST00000590334 NFATC2IPQ8NCF5 419 aa15.81■□□□□ 0.12
APOC1-206ENST00000590334 CICQ96RK0 1608 aaPredicted RBP15.81■□□□□ 0.12
APOC1-206ENST00000590334 SENP3-EIF4A1A0A087X0R7 540 aa15.8■□□□□ 0.12
APOC1-206ENST00000590334 CALD1Q05682 793 aaKnown RBP15.8■□□□□ 0.12
APOC1-206ENST00000590334 PIGBQ92521 554 aa15.8■□□□□ 0.12
APOC1-206ENST00000590334 THUMPD2Q9BTF0 503 aaKnown RBP15.8■□□□□ 0.12
APOC1-206ENST00000590334 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
APOC1-206ENST00000590334 IL16Q14005 1332 aa15.79■□□□□ 0.12
APOC1-206ENST00000590334 TAF7Q15545 349 aaPredicted RBP15.79■□□□□ 0.12
APOC1-206ENST00000590334 PTF1AQ7RTS3 328 aa15.79■□□□□ 0.12
APOC1-206ENST00000590334 WDR63Q8IWG1 891 aa15.79■□□□□ 0.12
APOC1-206ENST00000590334 BABAM1Q9NWV8 329 aa15.79■□□□□ 0.12
APOC1-206ENST00000590334 TRIM37O94972 964 aa15.78■□□□□ 0.12
APOC1-206ENST00000590334 HNRNPUQ00839 825 aaKnown RBP eCLIP15.78■□□□□ 0.12
APOC1-206ENST00000590334 SYTL4Q96C24 671 aaPredicted RBP15.78■□□□□ 0.12
APOC1-206ENST00000590334 SALL2Q9Y467 1007 aaPredicted RBP15.78■□□□□ 0.12
APOC1-206ENST00000590334 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
APOC1-206ENST00000590334 TAF1LQ8IZX4 1826 aa15.78■□□□□ 0.12
APOC1-206ENST00000590334 ZNF853P0CG23 659 aa15.77■□□□□ 0.12
APOC1-206ENST00000590334 CCDC125Q86Z20 511 aa15.77■□□□□ 0.12
APOC1-206ENST00000590334 RREB1Q92766 1687 aa15.76■□□□□ 0.11
APOC1-206ENST00000590334 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
APOC1-206ENST00000590334 IFT57Q9NWB7 429 aa15.76■□□□□ 0.11
APOC1-206ENST00000590334 COL5A3P25940 1745 aaPredicted RBP15.76■□□□□ 0.11
APOC1-206ENST00000590334 TJP1Q07157 1748 aa15.76■□□□□ 0.11
APOC1-206ENST00000590334 LAMB4A4D0S4 1761 aa15.75■□□□□ 0.11
APOC1-206ENST00000590334 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
APOC1-206ENST00000590334 BTBD11A6QL63 1104 aa15.75■□□□□ 0.11
APOC1-206ENST00000590334 CHL1O00533 1208 aa15.75■□□□□ 0.11
APOC1-206ENST00000590334 ATG3Q9NT62 314 aa15.75■□□□□ 0.11
APOC1-206ENST00000590334 ASAP1Q9ULH1 1129 aa15.75■□□□□ 0.11
APOC1-206ENST00000590334 C5P01031 1676 aa15.75■□□□□ 0.11
APOC1-206ENST00000590334 PLSCR1O15162 318 aa15.74■□□□□ 0.11
APOC1-206ENST00000590334 GNAI1P63096 354 aa15.74■□□□□ 0.11
APOC1-206ENST00000590334 ZNF790Q6PG37 636 aa15.74■□□□□ 0.11
APOC1-206ENST00000590334 SMARCC1Q92922 1105 aaPredicted RBP15.74■□□□□ 0.11
APOC1-206ENST00000590334 PALLDQ8WX93 1383 aa15.73■□□□□ 0.11
APOC1-206ENST00000590334 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
APOC1-206ENST00000590334 SLC39A6Q13433 755 aa15.72■□□□□ 0.11
APOC1-206ENST00000590334 UPF1Q92900 1129 aaKnown RBP eCLIP15.72■□□□□ 0.11
APOC1-206ENST00000590334 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
APOC1-206ENST00000590334 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
APOC1-206ENST00000590334 NUP188Q5SRE5 1749 aa15.71■□□□□ 0.11
APOC1-206ENST00000590334 APBA3O96018 575 aa15.71■□□□□ 0.11
APOC1-206ENST00000590334 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
APOC1-206ENST00000590334 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
APOC1-206ENST00000590334 MIS18AQ9NYP9 233 aa15.71■□□□□ 0.11
APOC1-206ENST00000590334 KCNQ3O43525 872 aa15.7■□□□□ 0.1
APOC1-206ENST00000590334 TRMT2AQ8IZ69 625 aaKnown RBP15.7■□□□□ 0.1
APOC1-206ENST00000590334 TTC5Q8N0Z6 440 aa15.7■□□□□ 0.1
APOC1-206ENST00000590334 LAS1LQ9Y4W2 734 aaKnown RBP15.7■□□□□ 0.1
APOC1-206ENST00000590334 E9PSI1 815 aa15.69■□□□□ 0.1
APOC1-206ENST00000590334 EIF4A1P60842 406 aaKnown RBP15.69■□□□□ 0.1
APOC1-206ENST00000590334 SLFN5Q08AF3 891 aa15.69■□□□□ 0.1
APOC1-206ENST00000590334 SF3B2Q13435 895 aaKnown RBP15.69■□□□□ 0.1
APOC1-206ENST00000590334 VSIG10Q8N0Z9 540 aa15.69■□□□□ 0.1
APOC1-206ENST00000590334 ZNF496Q96IT1 587 aaPredicted RBP15.69■□□□□ 0.1
APOC1-206ENST00000590334 MYH16Q9H6N6 1097 aa15.69■□□□□ 0.1
APOC1-206ENST00000590334 FMNL2Q96PY5 1086 aa15.68■□□□□ 0.1
APOC1-206ENST00000590334 FANCIQ9NVI1 1328 aa15.68■□□□□ 0.1
APOC1-206ENST00000590334 LOC102724428A0A0B4J2F2 783 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
APOC1-206ENST00000590334 BAG6P46379 1132 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 SIK1P57059 783 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 SLC27A3Q5K4L6 730 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 PROM2Q8N271 834 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 TSR2Q969E8 191 aaKnown RBP15.67■□□□□ 0.1
APOC1-206ENST00000590334 CDCA7LQ96GN5 454 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 SLC4A9Q96Q91 983 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 CAMKK2Q96RR4 588 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 C4BP0C0L5 1744 aa15.67■□□□□ 0.1
APOC1-206ENST00000590334 QSER1Q2KHR3 1735 aa15.66■□□□□ 0.1
APOC1-206ENST00000590334 CACNA1FO60840 1977 aa15.66■□□□□ 0.1
APOC1-206ENST00000590334 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
APOC1-206ENST00000590334 GIGYF1O75420 1035 aaPredicted RBP15.65■□□□□ 0.1
APOC1-206ENST00000590334 TXNRD1Q16881 649 aa15.65■□□□□ 0.1
APOC1-206ENST00000590334 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
APOC1-206ENST00000590334 SOS1Q07889 1333 aaPredicted RBP15.65■□□□□ 0.1
APOC1-206ENST00000590334 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
APOC1-206ENST00000590334 SNRPA1P09661 255 aaKnown RBP15.64■□□□□ 0.09
APOC1-206ENST00000590334 EN1Q05925 392 aaPredicted RBP15.64■□□□□ 0.09
APOC1-206ENST00000590334 DUSP27Q5VZP5 1158 aa15.64■□□□□ 0.09
APOC1-206ENST00000590334 UBR3Q6ZT12 1888 aa15.64■□□□□ 0.09
APOC1-206ENST00000590334 YTHDC1Q96MU7 727 aaKnown RBP15.64■□□□□ 0.09
APOC1-206ENST00000590334 TEX13AQ9BXU3 409 aaPredicted RBP15.64■□□□□ 0.09
APOC1-206ENST00000590334 LRRC4BQ9NT99 713 aa15.64■□□□□ 0.09
APOC1-206ENST00000590334 CCNL1Q9UK58 526 aaPredicted RBP15.64■□□□□ 0.09
APOC1-206ENST00000590334 HOXB7P09629 217 aa15.63■□□□□ 0.09
APOC1-206ENST00000590334 HMGB2P26583 209 aaKnown RBP15.63■□□□□ 0.09
APOC1-206ENST00000590334 ATP6V1AP38606 617 aa15.63■□□□□ 0.09
APOC1-206ENST00000590334 ITPK1Q13572 414 aa15.63■□□□□ 0.09
APOC1-206ENST00000590334 EZH2Q15910 746 aaKnown RBP15.63■□□□□ 0.09
APOC1-206ENST00000590334 DEFB132Q7Z7B7 95 aa15.63■□□□□ 0.09
APOC1-206ENST00000590334 KRT24Q2M2I5 525 aa15.62■□□□□ 0.09
APOC1-206ENST00000590334 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
APOC1-206ENST00000590334 EXOSC9Q06265 439 aaKnown RBP15.61■□□□□ 0.09
APOC1-206ENST00000590334 DNAJC10Q8IXB1 793 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms