RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 RSPH6AQ9H0K4 717 aa28.75■■■□□ 2.19
LRP3-202ENST00000590275 TAF1LQ8IZX4 1826 aa28.74■■■□□ 2.19
LRP3-202ENST00000590275 PHACTR3Q96KR7 559 aa28.74■■■□□ 2.19
LRP3-202ENST00000590275 RNMTO43148 476 aaKnown RBP28.73■■■□□ 2.19
LRP3-202ENST00000590275 C4BP0C0L5 1744 aa28.73■■■□□ 2.19
LRP3-202ENST00000590275 CFAP53Q96M91 514 aa28.72■■■□□ 2.19
LRP3-202ENST00000590275 PPP1R1BQ9UD71 204 aaPredicted RBP28.72■■■□□ 2.19
LRP3-202ENST00000590275 ATP6V1AP38606 617 aa28.71■■■□□ 2.19
LRP3-202ENST00000590275 PRKAR2BP31323 418 aa28.7■■■□□ 2.18
LRP3-202ENST00000590275 SLC52A2Q9HAB3 445 aa28.69■■■□□ 2.18
LRP3-202ENST00000590275 ADAMTS7Q9UKP4 1686 aa28.69■■■□□ 2.18
LRP3-202ENST00000590275 SCN11AQ9UI33 1791 aa28.68■■■□□ 2.18
LRP3-202ENST00000590275 MRC1P22897 1456 aa28.68■■■□□ 2.18
LRP3-202ENST00000590275 SLC16A10Q8TF71 515 aa28.68■■■□□ 2.18
LRP3-202ENST00000590275 RBM42Q9BTD8 480 aaKnown RBP28.68■■■□□ 2.18
LRP3-202ENST00000590275 PTCD1O75127 700 aaKnown RBP28.66■■■□□ 2.18
LRP3-202ENST00000590275 U2AF1L5P0DN76 240 aaPredicted RBP28.66■■■□□ 2.18
LRP3-202ENST00000590275 U2AF1Q01081 240 aaKnown RBP eCLIP28.66■■■□□ 2.18
LRP3-202ENST00000590275 IL17REQ8NFR9 667 aa28.66■■■□□ 2.18
LRP3-202ENST00000590275 SLC39A6Q13433 755 aa28.65■■■□□ 2.18
LRP3-202ENST00000590275 MSL1Q68DK7 614 aa28.65■■■□□ 2.18
LRP3-202ENST00000590275 AK7Q96M32 723 aa28.65■■■□□ 2.18
LRP3-202ENST00000590275 FHDC1Q9C0D6 1143 aaPredicted RBP28.65■■■□□ 2.18
LRP3-202ENST00000590275 COL24A1Q17RW2 1714 aa28.65■■■□□ 2.18
LRP3-202ENST00000590275 MSH5O43196 834 aa28.64■■■□□ 2.18
LRP3-202ENST00000590275 PHF14O94880 888 aa28.64■■■□□ 2.18
LRP3-202ENST00000590275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.63■■■□□ 2.17
LRP3-202ENST00000590275 ARXQ96QS3 562 aa28.63■■■□□ 2.17
LRP3-202ENST00000590275 NUDCQ9Y266 331 aa28.63■■■□□ 2.17
LRP3-202ENST00000590275 MAP3K5Q99683 1374 aa28.62■■■□□ 2.17
LRP3-202ENST00000590275 UBR3Q6ZT12 1888 aa28.61■■■□□ 2.17
LRP3-202ENST00000590275 GNPATO15228 680 aa28.6■■■□□ 2.17
LRP3-202ENST00000590275 GAS2L2Q8NHY3 880 aa28.6■■■□□ 2.17
LRP3-202ENST00000590275 SYT17Q9BSW7 474 aa28.6■■■□□ 2.17
LRP3-202ENST00000590275 ZNF831Q5JPB2 1677 aa28.59■■■□□ 2.17
LRP3-202ENST00000590275 GNAT3A8MTJ3 354 aa28.59■■■□□ 2.17
LRP3-202ENST00000590275 FCHSD2O94868 740 aa28.59■■■□□ 2.17
LRP3-202ENST00000590275 KCPQ6ZWJ8 1503 aa28.59■■■□□ 2.17
LRP3-202ENST00000590275 SSFA2P28290 1259 aa28.57■■■□□ 2.16
LRP3-202ENST00000590275 COL5A3P25940 1745 aaPredicted RBP28.57■■■□□ 2.16
LRP3-202ENST00000590275 TJP1Q07157 1748 aa28.56■■■□□ 2.16
LRP3-202ENST00000590275 RALBP1Q15311 655 aa28.56■■■□□ 2.16
LRP3-202ENST00000590275 FLAD1Q8NFF5 587 aa28.56■■■□□ 2.16
LRP3-202ENST00000590275 CEMIPQ8WUJ3 1361 aa28.56■■■□□ 2.16
LRP3-202ENST00000590275 CNTNAP4Q9C0A0 1308 aa28.55■■■□□ 2.16
LRP3-202ENST00000590275 ZEB1P37275 1124 aaPredicted RBP28.54■■■□□ 2.16
LRP3-202ENST00000590275 RC3H1Q5TC82 1133 aaKnown RBP28.54■■■□□ 2.16
LRP3-202ENST00000590275 DNAJC10Q8IXB1 793 aa28.54■■■□□ 2.16
LRP3-202ENST00000590275 PLEKHF1Q96S99 279 aa28.54■■■□□ 2.16
LRP3-202ENST00000590275 VIRMAQ69YN4 1812 aaKnown RBP28.53■■■□□ 2.16
LRP3-202ENST00000590275 CRKLP46109 303 aaKnown RBP28.53■■■□□ 2.16
LRP3-202ENST00000590275 HMGB2P26583 209 aaKnown RBP28.52■■■□□ 2.16
LRP3-202ENST00000590275 POLD1P28340 1107 aa28.52■■■□□ 2.16
LRP3-202ENST00000590275 INTS5Q6P9B9 1019 aaKnown RBP28.52■■■□□ 2.16
LRP3-202ENST00000590275 MYH14Q7Z406 1995 aaKnown RBP28.51■■■□□ 2.16
LRP3-202ENST00000590275 CICQ96RK0 1608 aaPredicted RBP28.51■■■□□ 2.15
LRP3-202ENST00000590275 DCTN1Q14203 1278 aa28.51■■■□□ 2.15
LRP3-202ENST00000590275 UTRNP46939 3433 aa28.5■■■□□ 2.15
LRP3-202ENST00000590275 KCNQ3O43525 872 aa28.5■■■□□ 2.15
LRP3-202ENST00000590275 RPS6KA4O75676 772 aa28.5■■■□□ 2.15
LRP3-202ENST00000590275 MCM10Q7L590 875 aa28.5■■■□□ 2.15
LRP3-202ENST00000590275 NLGN2Q8NFZ4 835 aa28.5■■■□□ 2.15
LRP3-202ENST00000590275 ARHGEF1Q92888 912 aaKnown RBP28.5■■■□□ 2.15
LRP3-202ENST00000590275 RTCBQ9Y3I0 505 aaKnown RBP28.5■■■□□ 2.15
LRP3-202ENST00000590275 SIPA1L3O60292 1781 aaPredicted RBP28.47■■■□□ 2.15
LRP3-202ENST00000590275 MYBBP1AQ9BQG0 1328 aaKnown RBP28.47■■■□□ 2.15
LRP3-202ENST00000590275 CYP19A1P11511 503 aaPredicted RBP28.47■■■□□ 2.15
LRP3-202ENST00000590275 TEFQ10587 303 aa28.47■■■□□ 2.15
LRP3-202ENST00000590275 ZNF496Q96IT1 587 aaPredicted RBP28.47■■■□□ 2.15
LRP3-202ENST00000590275 TRAPPC3LQ5T215 181 aa28.46■■■□□ 2.15
LRP3-202ENST00000590275 KLHL34Q8N239 644 aa28.46■■■□□ 2.15
LRP3-202ENST00000590275 UBR2Q8IWV8 1755 aa28.45■■■□□ 2.15
LRP3-202ENST00000590275 ZNF790Q6PG37 636 aa28.45■■■□□ 2.14
LRP3-202ENST00000590275 PRKRIP1Q9H875 184 aaPredicted RBP28.45■■■□□ 2.14
LRP3-202ENST00000590275 GOLGB1Q14789 3259 aaKnown RBP28.44■■■□□ 2.14
LRP3-202ENST00000590275 SRP68Q9UHB9 627 aaKnown RBP28.43■■■□□ 2.14
LRP3-202ENST00000590275 GYS1P13807 737 aa28.42■■■□□ 2.14
LRP3-202ENST00000590275 CCDC87Q9NVE4 849 aa28.42■■■□□ 2.14
LRP3-202ENST00000590275 ZBTB1Q9Y2K1 713 aa28.42■■■□□ 2.14
LRP3-202ENST00000590275 ADRA2BP18089 450 aa28.41■■■□□ 2.14
LRP3-202ENST00000590275 VSIG10Q8N0Z9 540 aa28.41■■■□□ 2.14
LRP3-202ENST00000590275 BTBD11A6QL63 1104 aa28.4■■■□□ 2.14
LRP3-202ENST00000590275 SOS1Q07889 1333 aaPredicted RBP28.4■■■□□ 2.14
LRP3-202ENST00000590275 HEG1Q9ULI3 1381 aa28.39■■■□□ 2.14
LRP3-202ENST00000590275 C4AP0C0L4 1744 aa28.39■■■□□ 2.14
LRP3-202ENST00000590275 TTC5Q8N0Z6 440 aa28.39■■■□□ 2.14
LRP3-202ENST00000590275 THUMPD2Q9BTF0 503 aaKnown RBP28.39■■■□□ 2.14
LRP3-202ENST00000590275 HTATSF1O43719 755 aaKnown RBP28.38■■■□□ 2.13
LRP3-202ENST00000590275 MMP10P09238 476 aa28.38■■■□□ 2.13
LRP3-202ENST00000590275 NFE2L2Q16236 605 aa28.38■■■□□ 2.13
LRP3-202ENST00000590275 PRAMEF22A3QJZ6 481 aa28.37■■■□□ 2.13
LRP3-202ENST00000590275 RFC4P35249 363 aa28.37■■■□□ 2.13
LRP3-202ENST00000590275 RTF1Q92541 710 aaKnown RBP28.37■■■□□ 2.13
LRP3-202ENST00000590275 MIS18AQ9NYP9 233 aa28.36■■■□□ 2.13
LRP3-202ENST00000590275 USP42Q9H9J4 1324 aaKnown RBP28.36■■■□□ 2.13
LRP3-202ENST00000590275 FKBP8Q14318 412 aa28.35■■■□□ 2.13
LRP3-202ENST00000590275 FMNL2Q96PY5 1086 aa28.33■■■□□ 2.13
LRP3-202ENST00000590275 ZNF316A6NFI3 1004 aaPredicted RBP28.32■■■□□ 2.12
LRP3-202ENST00000590275 CANXP27824 592 aaKnown RBP28.32■■■□□ 2.12
LRP3-202ENST00000590275 CCDC146Q8IYE0 955 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms