RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
HMGN1P31-201ENST00000590085 C4BP0C0L5 1744 aa12.42□□□□□ -0.42
HMGN1P31-201ENST00000590085 ERVV-2B6SEH9 535 aa12.42□□□□□ -0.42
HMGN1P31-201ENST00000590085 WDR43Q15061 677 aaKnown RBP eCLIP12.42□□□□□ -0.42
HMGN1P31-201ENST00000590085 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
HMGN1P31-201ENST00000590085 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
HMGN1P31-201ENST00000590085 KCPQ6ZWJ8 1503 aa12.42□□□□□ -0.42
HMGN1P31-201ENST00000590085 MYH14Q7Z406 1995 aaKnown RBP12.41□□□□□ -0.42
HMGN1P31-201ENST00000590085 EZH2Q15910 746 aaKnown RBP12.41□□□□□ -0.42
HMGN1P31-201ENST00000590085 PIGBQ92521 554 aa12.41□□□□□ -0.42
HMGN1P31-201ENST00000590085 GNAT3A8MTJ3 354 aa12.4□□□□□ -0.42
HMGN1P31-201ENST00000590085 RNMTO43148 476 aaKnown RBP12.4□□□□□ -0.42
HMGN1P31-201ENST00000590085 PNNQ9H307 717 aaKnown RBP12.4□□□□□ -0.42
HMGN1P31-201ENST00000590085 MRS2Q9HD23 443 aa12.4□□□□□ -0.42
HMGN1P31-201ENST00000590085 TMOD3Q9NYL9 352 aa12.4□□□□□ -0.42
HMGN1P31-201ENST00000590085 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
HMGN1P31-201ENST00000590085 PALLDQ8WX93 1383 aa12.4□□□□□ -0.42
HMGN1P31-201ENST00000590085 MAPK8IP3Q9UPT6 1336 aa12.39□□□□□ -0.43
HMGN1P31-201ENST00000590085 SRCAPQ6ZRS2 3230 aa12.39□□□□□ -0.43
HMGN1P31-201ENST00000590085 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
HMGN1P31-201ENST00000590085 PROM2Q8N271 834 aa12.39□□□□□ -0.43
HMGN1P31-201ENST00000590085 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
HMGN1P31-201ENST00000590085 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
HMGN1P31-201ENST00000590085 C4AP0C0L4 1744 aa12.39□□□□□ -0.43
HMGN1P31-201ENST00000590085 COL24A1Q17RW2 1714 aa12.38□□□□□ -0.43
HMGN1P31-201ENST00000590085 DIEXFQ68CQ4 756 aaKnown RBP12.38□□□□□ -0.43
HMGN1P31-201ENST00000590085 IL17REQ8NFR9 667 aa12.38□□□□□ -0.43
HMGN1P31-201ENST00000590085 RUNDC1Q96C34 613 aa12.38□□□□□ -0.43
HMGN1P31-201ENST00000590085 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
HMGN1P31-201ENST00000590085 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
HMGN1P31-201ENST00000590085 NEFMP07197 916 aa12.37□□□□□ -0.43
HMGN1P31-201ENST00000590085 CABP4P57796 275 aa12.37□□□□□ -0.43
HMGN1P31-201ENST00000590085 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
HMGN1P31-201ENST00000590085 CCDC146Q8IYE0 955 aa12.37□□□□□ -0.43
HMGN1P31-201ENST00000590085 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
HMGN1P31-201ENST00000590085 SMARCC1Q92922 1105 aaPredicted RBP12.36□□□□□ -0.43
HMGN1P31-201ENST00000590085 ATG3Q9NT62 314 aa12.36□□□□□ -0.43
HMGN1P31-201ENST00000590085 LRRC4BQ9NT99 713 aa12.36□□□□□ -0.43
HMGN1P31-201ENST00000590085 ASAP1Q9ULH1 1129 aa12.36□□□□□ -0.43
HMGN1P31-201ENST00000590085 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
HMGN1P31-201ENST00000590085 SLC27A3Q5K4L6 730 aa12.35□□□□□ -0.43
HMGN1P31-201ENST00000590085 MCM10Q7L590 875 aa12.35□□□□□ -0.43
HMGN1P31-201ENST00000590085 CCER2I3L3R5 266 aa12.34□□□□□ -0.43
HMGN1P31-201ENST00000590085 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
HMGN1P31-201ENST00000590085 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
HMGN1P31-201ENST00000590085 ANO8Q9HCE9 1232 aaPredicted RBP12.34□□□□□ -0.43
HMGN1P31-201ENST00000590085 LRP5O75197 1615 aa12.33□□□□□ -0.43
HMGN1P31-201ENST00000590085 TEFQ10587 303 aa12.33□□□□□ -0.44
HMGN1P31-201ENST00000590085 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
HMGN1P31-201ENST00000590085 LOC102724428A0A0B4J2F2 783 aa12.32□□□□□ -0.44
HMGN1P31-201ENST00000590085 KCNQ4P56696 695 aa12.32□□□□□ -0.44
HMGN1P31-201ENST00000590085 SIK1P57059 783 aa12.32□□□□□ -0.44
HMGN1P31-201ENST00000590085 SLC4A9Q96Q91 983 aa12.32□□□□□ -0.44
HMGN1P31-201ENST00000590085 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
HMGN1P31-201ENST00000590085 BCORQ6W2J9 1755 aa12.31□□□□□ -0.44
HMGN1P31-201ENST00000590085 APAF1O14727 1248 aa12.31□□□□□ -0.44
HMGN1P31-201ENST00000590085 RIPK4P57078 832 aa12.31□□□□□ -0.44
HMGN1P31-201ENST00000590085 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
HMGN1P31-201ENST00000590085 THUMPD2Q9BTF0 503 aaKnown RBP12.31□□□□□ -0.44
HMGN1P31-201ENST00000590085 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
HMGN1P31-201ENST00000590085 SCN7AQ01118 1682 aa12.3□□□□□ -0.44
HMGN1P31-201ENST00000590085 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
HMGN1P31-201ENST00000590085 ITPK1Q13572 414 aa12.3□□□□□ -0.44
HMGN1P31-201ENST00000590085 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
HMGN1P31-201ENST00000590085 MIER1Q8N108 512 aa12.3□□□□□ -0.44
HMGN1P31-201ENST00000590085 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
HMGN1P31-201ENST00000590085 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
HMGN1P31-201ENST00000590085 LINC00116Q8NCU8 138 aa12.29□□□□□ -0.44
HMGN1P31-201ENST00000590085 BTBD11A6QL63 1104 aa12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 R3HDM1Q15032 1099 aaKnown RBP12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 SLC15A2Q16348 729 aa12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 FAM9BQ8IZU0 186 aa12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
HMGN1P31-201ENST00000590085 KCNQ3O43525 872 aa12.27□□□□□ -0.45
HMGN1P31-201ENST00000590085 ATP6V1AP38606 617 aa12.27□□□□□ -0.45
HMGN1P31-201ENST00000590085 TTC5Q8N0Z6 440 aa12.27□□□□□ -0.45
HMGN1P31-201ENST00000590085 ZNF496Q96IT1 587 aaPredicted RBP12.27□□□□□ -0.45
HMGN1P31-201ENST00000590085 STK32BQ9NY57 414 aa12.27□□□□□ -0.45
HMGN1P31-201ENST00000590085 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
HMGN1P31-201ENST00000590085 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
HMGN1P31-201ENST00000590085 VSIG10Q8N0Z9 540 aa12.26□□□□□ -0.45
HMGN1P31-201ENST00000590085 RNF39Q9H2S5 420 aa12.26□□□□□ -0.45
HMGN1P31-201ENST00000590085 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
HMGN1P31-201ENST00000590085 HMGB2P26583 209 aaKnown RBP12.25□□□□□ -0.45
HMGN1P31-201ENST00000590085 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
HMGN1P31-201ENST00000590085 BABAM1Q9NWV8 329 aa12.25□□□□□ -0.45
HMGN1P31-201ENST00000590085 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
HMGN1P31-201ENST00000590085 NUP98P52948 1817 aa12.24□□□□□ -0.45
HMGN1P31-201ENST00000590085 ANKRD36CQ5JPF3 1778 aa12.24□□□□□ -0.45
HMGN1P31-201ENST00000590085 AMIGO3Q86WK7 504 aa12.24□□□□□ -0.45
HMGN1P31-201ENST00000590085 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
HMGN1P31-201ENST00000590085 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
HMGN1P31-201ENST00000590085 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
HMGN1P31-201ENST00000590085 CYP19A1P11511 503 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms