RNA–Protein interactions for RNA: ENST00000589925.1

SAFB2-204, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-204ENST00000589925 SCN11AQ9UI33 1791 aa22.45■■□□□ 1.19
SAFB2-204ENST00000589925 RNMTO43148 476 aaKnown RBP22.45■■□□□ 1.18
SAFB2-204ENST00000589925 FCHSD2O94868 740 aa22.45■■□□□ 1.18
SAFB2-204ENST00000589925 HMGB2P26583 209 aaKnown RBP22.45■■□□□ 1.18
SAFB2-204ENST00000589925 GAS2L2Q8NHY3 880 aa22.45■■□□□ 1.18
SAFB2-204ENST00000589925 SLC52A2Q9HAB3 445 aa22.45■■□□□ 1.18
SAFB2-204ENST00000589925 MAP3K5Q99683 1374 aa22.44■■□□□ 1.18
SAFB2-204ENST00000589925 TAF1LQ8IZX4 1826 aa22.43■■□□□ 1.18
SAFB2-204ENST00000589925 C4BP0C0L5 1744 aa22.43■■□□□ 1.18
SAFB2-204ENST00000589925 ITPK1Q13572 414 aa22.43■■□□□ 1.18
SAFB2-204ENST00000589925 SLC4A9Q96Q91 983 aa22.43■■□□□ 1.18
SAFB2-204ENST00000589925 MTFR1LQ9H019 292 aa22.43■■□□□ 1.18
SAFB2-204ENST00000589925 TUBGCP6Q96RT7 1819 aa22.43■■□□□ 1.18
SAFB2-204ENST00000589925 MYBBP1AQ9BQG0 1328 aaKnown RBP22.42■■□□□ 1.18
SAFB2-204ENST00000589925 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
SAFB2-204ENST00000589925 PTGER2P43116 358 aa22.42■■□□□ 1.18
SAFB2-204ENST00000589925 LINC00116Q8NCU8 138 aa22.42■■□□□ 1.18
SAFB2-204ENST00000589925 GNAT3A8MTJ3 354 aa22.41■■□□□ 1.18
SAFB2-204ENST00000589925 ZNF831Q5JPB2 1677 aa22.41■■□□□ 1.18
SAFB2-204ENST00000589925 ATF5Q9Y2D1 282 aaPredicted RBP22.4■■□□□ 1.18
SAFB2-204ENST00000589925 SLC16A10Q8TF71 515 aa22.39■■□□□ 1.17
SAFB2-204ENST00000589925 SGIP1Q9BQI5 828 aa22.39■■□□□ 1.17
SAFB2-204ENST00000589925 RBM42Q9BTD8 480 aaKnown RBP22.39■■□□□ 1.17
SAFB2-204ENST00000589925 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
SAFB2-204ENST00000589925 COL23A1Q86Y22 540 aaPredicted RBP22.38■■□□□ 1.17
SAFB2-204ENST00000589925 IL17REQ8NFR9 667 aa22.38■■□□□ 1.17
SAFB2-204ENST00000589925 AK7Q96M32 723 aa22.38■■□□□ 1.17
SAFB2-204ENST00000589925 PRKRIP1Q9H875 184 aaPredicted RBP22.38■■□□□ 1.17
SAFB2-204ENST00000589925 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
SAFB2-204ENST00000589925 PTCD1O75127 700 aaKnown RBP22.37■■□□□ 1.17
SAFB2-204ENST00000589925 CEMIPQ8WUJ3 1361 aa22.37■■□□□ 1.17
SAFB2-204ENST00000589925 PLEKHF1Q96S99 279 aa22.36■■□□□ 1.17
SAFB2-204ENST00000589925 FLAD1Q8NFF5 587 aa22.35■■□□□ 1.17
SAFB2-204ENST00000589925 PPP1R1BQ9UD71 204 aaPredicted RBP22.35■■□□□ 1.17
SAFB2-204ENST00000589925 CICQ96RK0 1608 aaPredicted RBP22.35■■□□□ 1.17
SAFB2-204ENST00000589925 SLC39A6Q13433 755 aa22.34■■□□□ 1.17
SAFB2-204ENST00000589925 KCPQ6ZWJ8 1503 aa22.34■■□□□ 1.17
SAFB2-204ENST00000589925 COL5A3P25940 1745 aaPredicted RBP22.34■■□□□ 1.17
SAFB2-204ENST00000589925 VIRMAQ69YN4 1812 aaKnown RBP22.34■■□□□ 1.17
SAFB2-204ENST00000589925 SSFA2P28290 1259 aa22.33■■□□□ 1.17
SAFB2-204ENST00000589925 UBR3Q6ZT12 1888 aa22.32■■□□□ 1.16
SAFB2-204ENST00000589925 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.32■■□□□ 1.16
SAFB2-204ENST00000589925 GNPATO15228 680 aa22.32■■□□□ 1.16
SAFB2-204ENST00000589925 MSH5O43196 834 aa22.32■■□□□ 1.16
SAFB2-204ENST00000589925 TEFQ10587 303 aa22.32■■□□□ 1.16
SAFB2-204ENST00000589925 SMIM5Q71RC9 77 aa22.32■■□□□ 1.16
SAFB2-204ENST00000589925 CNTNAP4Q9C0A0 1308 aa22.31■■□□□ 1.16
SAFB2-204ENST00000589925 COL24A1Q17RW2 1714 aa22.31■■□□□ 1.16
SAFB2-204ENST00000589925 PHF14O94880 888 aa22.31■■□□□ 1.16
SAFB2-204ENST00000589925 RC3H1Q5TC82 1133 aaKnown RBP22.31■■□□□ 1.16
SAFB2-204ENST00000589925 TJP1Q07157 1748 aa22.31■■□□□ 1.16
SAFB2-204ENST00000589925 SIPA1L3O60292 1781 aaPredicted RBP22.3■■□□□ 1.16
SAFB2-204ENST00000589925 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
SAFB2-204ENST00000589925 MCM10Q7L590 875 aa22.29■■□□□ 1.16
SAFB2-204ENST00000589925 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
SAFB2-204ENST00000589925 UBR2Q8IWV8 1755 aa22.28■■□□□ 1.16
SAFB2-204ENST00000589925 NEFMP07197 916 aa22.28■■□□□ 1.16
SAFB2-204ENST00000589925 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
SAFB2-204ENST00000589925 ARXQ96QS3 562 aa22.28■■□□□ 1.16
SAFB2-204ENST00000589925 ZNF790Q6PG37 636 aa22.27■■□□□ 1.16
SAFB2-204ENST00000589925 RTCBQ9Y3I0 505 aaKnown RBP22.27■■□□□ 1.16
SAFB2-204ENST00000589925 POLD1P28340 1107 aa22.26■■□□□ 1.15
SAFB2-204ENST00000589925 CRKLP46109 303 aaKnown RBP22.26■■□□□ 1.15
SAFB2-204ENST00000589925 DCTN1Q14203 1278 aa22.26■■□□□ 1.15
SAFB2-204ENST00000589925 DNAJC10Q8IXB1 793 aa22.26■■□□□ 1.15
SAFB2-204ENST00000589925 TTC5Q8N0Z6 440 aa22.26■■□□□ 1.15
SAFB2-204ENST00000589925 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
SAFB2-204ENST00000589925 MAPK8IP3Q9UPT6 1336 aa22.26■■□□□ 1.15
SAFB2-204ENST00000589925 UTRNP46939 3433 aa22.25■■□□□ 1.15
SAFB2-204ENST00000589925 NFE2L2Q16236 605 aa22.25■■□□□ 1.15
SAFB2-204ENST00000589925 MSL1Q68DK7 614 aa22.25■■□□□ 1.15
SAFB2-204ENST00000589925 FHDC1Q9C0D6 1143 aaPredicted RBP22.25■■□□□ 1.15
SAFB2-204ENST00000589925 GOLGB1Q14789 3259 aaKnown RBP22.24■■□□□ 1.15
SAFB2-204ENST00000589925 BTBD11A6QL63 1104 aa22.24■■□□□ 1.15
SAFB2-204ENST00000589925 RPS6KA4O75676 772 aa22.24■■□□□ 1.15
SAFB2-204ENST00000589925 ADRA2BP18089 450 aa22.24■■□□□ 1.15
SAFB2-204ENST00000589925 ZNF496Q96IT1 587 aaPredicted RBP22.24■■□□□ 1.15
SAFB2-204ENST00000589925 CYP19A1P11511 503 aaPredicted RBP22.23■■□□□ 1.15
SAFB2-204ENST00000589925 TRAPPC3LQ5T215 181 aa22.23■■□□□ 1.15
SAFB2-204ENST00000589925 INTS5Q6P9B9 1019 aaKnown RBP22.23■■□□□ 1.15
SAFB2-204ENST00000589925 ARHGEF1Q92888 912 aaKnown RBP22.22■■□□□ 1.15
SAFB2-204ENST00000589925 SYT17Q9BSW7 474 aa22.22■■□□□ 1.15
SAFB2-204ENST00000589925 MYH14Q7Z406 1995 aaKnown RBP22.21■■□□□ 1.15
SAFB2-204ENST00000589925 WDR43Q15061 677 aaKnown RBP eCLIP22.21■■□□□ 1.15
SAFB2-204ENST00000589925 CCDC87Q9NVE4 849 aa22.21■■□□□ 1.15
SAFB2-204ENST00000589925 HEG1Q9ULI3 1381 aa22.21■■□□□ 1.15
SAFB2-204ENST00000589925 KCNQ3O43525 872 aa22.2■■□□□ 1.14
SAFB2-204ENST00000589925 ADAMTS8Q9UP79 889 aa22.2■■□□□ 1.14
SAFB2-204ENST00000589925 FMNL2Q96PY5 1086 aa22.19■■□□□ 1.14
SAFB2-204ENST00000589925 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
SAFB2-204ENST00000589925 SOS1Q07889 1333 aaPredicted RBP22.17■■□□□ 1.14
SAFB2-204ENST00000589925 RFC4P35249 363 aa22.17■■□□□ 1.14
SAFB2-204ENST00000589925 TAF7Q15545 349 aaPredicted RBP22.17■■□□□ 1.14
SAFB2-204ENST00000589925 CCDC146Q8IYE0 955 aa22.17■■□□□ 1.14
SAFB2-204ENST00000589925 THUMPD2Q9BTF0 503 aaKnown RBP22.17■■□□□ 1.14
SAFB2-204ENST00000589925 ZBTB1Q9Y2K1 713 aa22.17■■□□□ 1.14
SAFB2-204ENST00000589925 C4AP0C0L4 1744 aa22.17■■□□□ 1.14
SAFB2-204ENST00000589925 STARD3NLO95772 234 aa22.16■■□□□ 1.14
SAFB2-204ENST00000589925 TMPOP42166 694 aaKnown RBP22.16■■□□□ 1.14
SAFB2-204ENST00000589925 RIPK4P57078 832 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms