RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 IFNL2Q8IZJ0 200 aa11.28□□□□□ -0.6
TPM4-211ENST00000589897 SMARCC1Q92922 1105 aaPredicted RBP11.28□□□□□ -0.6
TPM4-211ENST00000589897 KDM2BQ8NHM5 1336 aa11.28□□□□□ -0.6
TPM4-211ENST00000589897 LY75O60449 1722 aa11.27□□□□□ -0.61
TPM4-211ENST00000589897 PKD1L3Q7Z443 1732 aa11.27□□□□□ -0.61
TPM4-211ENST00000589897 HSPA1AP0DMV8 641 aaKnown RBP11.27□□□□□ -0.61
TPM4-211ENST00000589897 HSPA1BP0DMV9 641 aaKnown RBP11.27□□□□□ -0.61
TPM4-211ENST00000589897 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
TPM4-211ENST00000589897 PLEKHO1Q53GL0 409 aaPredicted RBP11.27□□□□□ -0.61
TPM4-211ENST00000589897 SMC1BQ8NDV3 1235 aa11.27□□□□□ -0.61
TPM4-211ENST00000589897 AK7Q96M32 723 aa11.27□□□□□ -0.61
TPM4-211ENST00000589897 TMOD3Q9NYL9 352 aa11.27□□□□□ -0.61
TPM4-211ENST00000589897 ITGB4P16144 1822 aa11.26□□□□□ -0.61
TPM4-211ENST00000589897 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
TPM4-211ENST00000589897 BCS1LQ9Y276 419 aa11.26□□□□□ -0.61
TPM4-211ENST00000589897 PALLDQ8WX93 1383 aa11.26□□□□□ -0.61
TPM4-211ENST00000589897 COL24A1Q17RW2 1714 aa11.26□□□□□ -0.61
TPM4-211ENST00000589897 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
TPM4-211ENST00000589897 HSP90AB1P08238 724 aaKnown RBP11.25□□□□□ -0.61
TPM4-211ENST00000589897 PHKG2P15735 406 aa11.25□□□□□ -0.61
TPM4-211ENST00000589897 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
TPM4-211ENST00000589897 AMOTQ4VCS5 1084 aa11.25□□□□□ -0.61
TPM4-211ENST00000589897 C1orf141Q5JVX7 400 aa11.25□□□□□ -0.61
TPM4-211ENST00000589897 PIGBQ92521 554 aa11.25□□□□□ -0.61
TPM4-211ENST00000589897 SSFA2P28290 1259 aa11.24□□□□□ -0.61
TPM4-211ENST00000589897 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
TPM4-211ENST00000589897 ZNF530Q6P9A1 599 aaPredicted RBP11.24□□□□□ -0.61
TPM4-211ENST00000589897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.23□□□□□ -0.61
TPM4-211ENST00000589897 MTHFSP49914 203 aa11.23□□□□□ -0.61
TPM4-211ENST00000589897 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
TPM4-211ENST00000589897 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
TPM4-211ENST00000589897 RRAGCQ9HB90 399 aa11.23□□□□□ -0.61
TPM4-211ENST00000589897 PLEKHG2Q9H7P9 1386 aa11.23□□□□□ -0.61
TPM4-211ENST00000589897 QSER1Q2KHR3 1735 aa11.23□□□□□ -0.61
TPM4-211ENST00000589897 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
TPM4-211ENST00000589897 FCHSD2O94868 740 aa11.22□□□□□ -0.61
TPM4-211ENST00000589897 PHF14O94880 888 aa11.22□□□□□ -0.61
TPM4-211ENST00000589897 C5P01031 1676 aa11.22□□□□□ -0.61
TPM4-211ENST00000589897 DCAF5Q96JK2 942 aa11.22□□□□□ -0.61
TPM4-211ENST00000589897 TOGARAM1Q9Y4F4 1720 aa11.22□□□□□ -0.61
TPM4-211ENST00000589897 LOC102724428A0A0B4J2F2 783 aa11.21□□□□□ -0.61
TPM4-211ENST00000589897 ERVV-2B6SEH9 535 aa11.21□□□□□ -0.61
TPM4-211ENST00000589897 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
TPM4-211ENST00000589897 SIK1P57059 783 aa11.21□□□□□ -0.61
TPM4-211ENST00000589897 CABP4P57796 275 aa11.21□□□□□ -0.61
TPM4-211ENST00000589897 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.61
TPM4-211ENST00000589897 NLGN1Q8N2Q7 840 aa11.21□□□□□ -0.61
TPM4-211ENST00000589897 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.62
TPM4-211ENST00000589897 PER1O15534 1290 aaPredicted RBP11.2□□□□□ -0.62
TPM4-211ENST00000589897 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
TPM4-211ENST00000589897 MMP10P09238 476 aa11.2□□□□□ -0.62
TPM4-211ENST00000589897 IL13P35225 146 aa11.2□□□□□ -0.62
TPM4-211ENST00000589897 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
TPM4-211ENST00000589897 ASAP1Q9ULH1 1129 aa11.2□□□□□ -0.62
TPM4-211ENST00000589897 TAF1LQ8IZX4 1826 aa11.2□□□□□ -0.62
TPM4-211ENST00000589897 VEGFAP15692 232 aaPredicted RBP11.19□□□□□ -0.62
TPM4-211ENST00000589897 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
TPM4-211ENST00000589897 CCDC87Q9NVE4 849 aa11.19□□□□□ -0.62
TPM4-211ENST00000589897 PIM2Q9P1W9 311 aa11.19□□□□□ -0.62
TPM4-211ENST00000589897 U2SURPO15042 1029 aaKnown RBP11.18□□□□□ -0.62
TPM4-211ENST00000589897 HMOX1P09601 288 aa11.18□□□□□ -0.62
TPM4-211ENST00000589897 ATG3Q9NT62 314 aa11.18□□□□□ -0.62
TPM4-211ENST00000589897 C4BP0C0L5 1744 aa11.18□□□□□ -0.62
TPM4-211ENST00000589897 GNPATO15228 680 aa11.17□□□□□ -0.62
TPM4-211ENST00000589897 DPEP1P16444 411 aa11.17□□□□□ -0.62
TPM4-211ENST00000589897 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
TPM4-211ENST00000589897 RNF181Q9P0P0 153 aa11.17□□□□□ -0.62
TPM4-211ENST00000589897 C10orf71Q711Q0 1435 aa11.17□□□□□ -0.62
TPM4-211ENST00000589897 NPC1L1Q9UHC9 1359 aa11.16□□□□□ -0.62
TPM4-211ENST00000589897 DALRD3Q5D0E6 543 aaKnown RBP11.16□□□□□ -0.62
TPM4-211ENST00000589897 AKAP4Q5JQC9 854 aa11.16□□□□□ -0.62
TPM4-211ENST00000589897 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
TPM4-211ENST00000589897 NFATC2IPQ8NCF5 419 aa11.16□□□□□ -0.62
TPM4-211ENST00000589897 LINC00116Q8NCU8 138 aa11.16□□□□□ -0.62
TPM4-211ENST00000589897 KDRP35968 1356 aa11.16□□□□□ -0.62
TPM4-211ENST00000589897 PTCD1O75127 700 aaKnown RBP11.15□□□□□ -0.62
TPM4-211ENST00000589897 AMIGO3Q86WK7 504 aa11.15□□□□□ -0.62
TPM4-211ENST00000589897 RTCBQ9Y3I0 505 aaKnown RBP11.15□□□□□ -0.62
TPM4-211ENST00000589897 PARP3Q9Y6F1 533 aa11.15□□□□□ -0.62
TPM4-211ENST00000589897 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
TPM4-211ENST00000589897 CTCFP49711 727 aaPredicted RBP11.14□□□□□ -0.63
TPM4-211ENST00000589897 ITPK1Q13572 414 aa11.14□□□□□ -0.63
TPM4-211ENST00000589897 SMIM5Q71RC9 77 aa11.14□□□□□ -0.63
TPM4-211ENST00000589897 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
TPM4-211ENST00000589897 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
TPM4-211ENST00000589897 KDM6AO15550 1401 aaPredicted RBP11.14□□□□□ -0.63
TPM4-211ENST00000589897 WDR90Q96KV7 1748 aa11.14□□□□□ -0.63
TPM4-211ENST00000589897 UBR3Q6ZT12 1888 aa11.14□□□□□ -0.63
TPM4-211ENST00000589897 PXDNLA1KZ92 1463 aa11.13□□□□□ -0.63
TPM4-211ENST00000589897 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
TPM4-211ENST00000589897 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
TPM4-211ENST00000589897 SCN11AQ9UI33 1791 aa11.13□□□□□ -0.63
TPM4-211ENST00000589897 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
TPM4-211ENST00000589897 ADRA2BP18089 450 aa11.12□□□□□ -0.63
TPM4-211ENST00000589897 KCNA3P22001 575 aa11.12□□□□□ -0.63
TPM4-211ENST00000589897 RFC4P35249 363 aa11.12□□□□□ -0.63
TPM4-211ENST00000589897 MTHFSDQ2M296 383 aaKnown RBP11.12□□□□□ -0.63
TPM4-211ENST00000589897 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
TPM4-211ENST00000589897 RC3H1Q5TC82 1133 aaKnown RBP11.12□□□□□ -0.63
TPM4-211ENST00000589897 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms