RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
TREM1-204ENST00000589614 SBNO2Q9Y2G9 1366 aa13.61□□□□□ -0.23
TREM1-204ENST00000589614 NME9Q86XW9 330 aa13.61□□□□□ -0.23
TREM1-204ENST00000589614 PHF14O94880 888 aa13.6□□□□□ -0.23
TREM1-204ENST00000589614 SMARCC1Q92922 1105 aaPredicted RBP13.6□□□□□ -0.23
TREM1-204ENST00000589614 RRAGCQ9HB90 399 aa13.6□□□□□ -0.23
TREM1-204ENST00000589614 A0A0G2JLW4 131 aa13.59□□□□□ -0.23
TREM1-204ENST00000589614 FCHSD2O94868 740 aa13.59□□□□□ -0.23
TREM1-204ENST00000589614 MMP10P09238 476 aa13.59□□□□□ -0.23
TREM1-204ENST00000589614 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
TREM1-204ENST00000589614 CD163L1Q9NR16 1453 aa13.58□□□□□ -0.24
TREM1-204ENST00000589614 EDC4Q6P2E9 1401 aaKnown RBP13.57□□□□□ -0.24
TREM1-204ENST00000589614 PRDM10Q9NQV6 1147 aa13.57□□□□□ -0.24
TREM1-204ENST00000589614 ZC3H4Q9UPT8 1303 aaKnown RBP13.57□□□□□ -0.24
TREM1-204ENST00000589614 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
TREM1-204ENST00000589614 MPRIPQ6WCQ1 1025 aa13.56□□□□□ -0.24
TREM1-204ENST00000589614 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
TREM1-204ENST00000589614 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
TREM1-204ENST00000589614 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
TREM1-204ENST00000589614 DPEP1P16444 411 aa13.55□□□□□ -0.24
TREM1-204ENST00000589614 NLGN1Q8N2Q7 840 aa13.55□□□□□ -0.24
TREM1-204ENST00000589614 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
TREM1-204ENST00000589614 CCDC87Q9NVE4 849 aa13.55□□□□□ -0.24
TREM1-204ENST00000589614 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
TREM1-204ENST00000589614 KCNA3P22001 575 aa13.54□□□□□ -0.24
TREM1-204ENST00000589614 HOXC9P31274 260 aa13.54□□□□□ -0.24
TREM1-204ENST00000589614 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
TREM1-204ENST00000589614 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
TREM1-204ENST00000589614 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
TREM1-204ENST00000589614 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
TREM1-204ENST00000589614 PIM2Q9P1W9 311 aa13.53□□□□□ -0.24
TREM1-204ENST00000589614 LOC102724428A0A0B4J2F2 783 aa13.52□□□□□ -0.25
TREM1-204ENST00000589614 GNPATO15228 680 aa13.52□□□□□ -0.25
TREM1-204ENST00000589614 SIK1P57059 783 aa13.52□□□□□ -0.25
TREM1-204ENST00000589614 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
TREM1-204ENST00000589614 MAP3K19Q56UN5 1328 aa13.52□□□□□ -0.25
TREM1-204ENST00000589614 KDM6AO15550 1401 aaPredicted RBP13.51□□□□□ -0.25
TREM1-204ENST00000589614 RTL1A6NKG5 1358 aa13.51□□□□□ -0.25
TREM1-204ENST00000589614 FOXN1O15353 648 aa13.51□□□□□ -0.25
TREM1-204ENST00000589614 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
TREM1-204ENST00000589614 TMF1P82094 1093 aa13.51□□□□□ -0.25
TREM1-204ENST00000589614 DALRD3Q5D0E6 543 aaKnown RBP13.51□□□□□ -0.25
TREM1-204ENST00000589614 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
TREM1-204ENST00000589614 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
TREM1-204ENST00000589614 AMPHP49418 695 aa13.5□□□□□ -0.25
TREM1-204ENST00000589614 PIGBQ92521 554 aa13.5□□□□□ -0.25
TREM1-204ENST00000589614 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
TREM1-204ENST00000589614 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
TREM1-204ENST00000589614 GLTPD2A6NH11 291 aa13.49□□□□□ -0.25
TREM1-204ENST00000589614 CYP27B1O15528 508 aa13.49□□□□□ -0.25
TREM1-204ENST00000589614 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
TREM1-204ENST00000589614 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
TREM1-204ENST00000589614 SMG6Q86US8 1419 aaKnown RBP13.48□□□□□ -0.25
TREM1-204ENST00000589614 A0A1W2PP64 1363 aa13.48□□□□□ -0.25
TREM1-204ENST00000589614 CTCFP49711 727 aaPredicted RBP13.48□□□□□ -0.25
TREM1-204ENST00000589614 ITPK1Q13572 414 aa13.48□□□□□ -0.25
TREM1-204ENST00000589614 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
TREM1-204ENST00000589614 PARP3Q9Y6F1 533 aa13.48□□□□□ -0.25
TREM1-204ENST00000589614 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
TREM1-204ENST00000589614 TIAM2Q8IVF5 1701 aa13.47□□□□□ -0.25
TREM1-204ENST00000589614 GYS1P13807 737 aa13.47□□□□□ -0.25
TREM1-204ENST00000589614 DSG3P32926 999 aa13.47□□□□□ -0.25
TREM1-204ENST00000589614 ATP6V1AP38606 617 aa13.47□□□□□ -0.25
TREM1-204ENST00000589614 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
TREM1-204ENST00000589614 RTCBQ9Y3I0 505 aaKnown RBP13.47□□□□□ -0.25
TREM1-204ENST00000589614 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.25
TREM1-204ENST00000589614 RGS19P49795 217 aa13.46□□□□□ -0.25
TREM1-204ENST00000589614 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
TREM1-204ENST00000589614 USHBP1Q8N6Y0 703 aa13.46□□□□□ -0.25
TREM1-204ENST00000589614 TMC1Q8TDI8 760 aa13.46□□□□□ -0.25
TREM1-204ENST00000589614 ABHD8Q96I13 439 aa13.46□□□□□ -0.25
TREM1-204ENST00000589614 COG3Q96JB2 828 aa13.46□□□□□ -0.25
TREM1-204ENST00000589614 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
TREM1-204ENST00000589614 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
TREM1-204ENST00000589614 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.25
TREM1-204ENST00000589614 LMNB1P20700 586 aa13.45□□□□□ -0.26
TREM1-204ENST00000589614 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
TREM1-204ENST00000589614 AIDAQ96BJ3 306 aa13.45□□□□□ -0.26
TREM1-204ENST00000589614 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
TREM1-204ENST00000589614 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
TREM1-204ENST00000589614 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
TREM1-204ENST00000589614 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
TREM1-204ENST00000589614 TNRC18O15417 2968 aaPredicted RBP13.44□□□□□ -0.26
TREM1-204ENST00000589614 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
TREM1-204ENST00000589614 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
TREM1-204ENST00000589614 KDRP35968 1356 aa13.43□□□□□ -0.26
TREM1-204ENST00000589614 DICER1Q9UPY3 1922 aaKnown RBP13.43□□□□□ -0.26
TREM1-204ENST00000589614 POTECB2RU33 542 aa13.42□□□□□ -0.26
TREM1-204ENST00000589614 FBLN1P23142 703 aa13.42□□□□□ -0.26
TREM1-204ENST00000589614 RFC4P35249 363 aa13.42□□□□□ -0.26
TREM1-204ENST00000589614 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
TREM1-204ENST00000589614 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
TREM1-204ENST00000589614 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
TREM1-204ENST00000589614 DLEC1Q9Y238 1755 aa13.42□□□□□ -0.26
TREM1-204ENST00000589614 INSRP06213 1382 aa13.42□□□□□ -0.26
TREM1-204ENST00000589614 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
TREM1-204ENST00000589614 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
TREM1-204ENST00000589614 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
TREM1-204ENST00000589614 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
TREM1-204ENST00000589614 CNTNAP4Q9C0A0 1308 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms