RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 VEGFAP15692 232 aaPredicted RBP8.84□□□□□ -0.99
VPS25-204ENST00000589577 LBX1P52954 281 aa8.84□□□□□ -0.99
VPS25-204ENST00000589577 RASSF7Q02833 373 aa8.84□□□□□ -0.99
VPS25-204ENST00000589577 ITPK1Q13572 414 aa8.84□□□□□ -0.99
VPS25-204ENST00000589577 CREBZFQ9NS37 354 aa8.84□□□□□ -0.99
VPS25-204ENST00000589577 MYH14Q7Z406 1995 aaKnown RBP8.84□□□□□ -0.99
VPS25-204ENST00000589577 ZNF831Q5JPB2 1677 aa8.84□□□□□ -0.99
VPS25-204ENST00000589577 DICER1Q9UPY3 1922 aaKnown RBP8.84□□□□□ -1
VPS25-204ENST00000589577 ZC3H4Q9UPT8 1303 aaKnown RBP8.83□□□□□ -1
VPS25-204ENST00000589577 GLTPD2A6NH11 291 aa8.83□□□□□ -1
VPS25-204ENST00000589577 HOXC9P31274 260 aa8.83□□□□□ -1
VPS25-204ENST00000589577 CTCFP49711 727 aaPredicted RBP8.83□□□□□ -1
VPS25-204ENST00000589577 MAP3K19Q56UN5 1328 aa8.82□□□□□ -1
VPS25-204ENST00000589577 ADAMTS7Q9UKP4 1686 aa8.82□□□□□ -1
VPS25-204ENST00000589577 EDC4Q6P2E9 1401 aaKnown RBP8.82□□□□□ -1
VPS25-204ENST00000589577 LOC102724428A0A0B4J2F2 783 aa8.82□□□□□ -1
VPS25-204ENST00000589577 CYP27B1O15528 508 aa8.82□□□□□ -1
VPS25-204ENST00000589577 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
VPS25-204ENST00000589577 SIK1P57059 783 aa8.82□□□□□ -1
VPS25-204ENST00000589577 NBPF6Q5VWK0 638 aa8.82□□□□□ -1
VPS25-204ENST00000589577 USHBP1Q8N6Y0 703 aa8.82□□□□□ -1
VPS25-204ENST00000589577 PIGBQ92521 554 aa8.82□□□□□ -1
VPS25-204ENST00000589577 SMARCC1Q92922 1105 aaPredicted RBP8.82□□□□□ -1
VPS25-204ENST00000589577 NBPF4Q96M43 638 aa8.82□□□□□ -1
VPS25-204ENST00000589577 WBP1LQ9NX94 342 aa8.82□□□□□ -1
VPS25-204ENST00000589577 PIM2Q9P1W9 311 aa8.82□□□□□ -1
VPS25-204ENST00000589577 THSD7BQ9C0I4 1608 aa8.82□□□□□ -1
VPS25-204ENST00000589577 CGNL1Q0VF96 1302 aa8.81□□□□□ -1
VPS25-204ENST00000589577 PCDH11XQ9BZA7 1347 aa8.81□□□□□ -1
VPS25-204ENST00000589577 PCDH11YQ9BZA8 1340 aa8.81□□□□□ -1
VPS25-204ENST00000589577 HSPA8P11142 646 aaKnown RBP8.81□□□□□ -1
VPS25-204ENST00000589577 GYS1P13807 737 aa8.81□□□□□ -1
VPS25-204ENST00000589577 FBLN1P23142 703 aa8.81□□□□□ -1
VPS25-204ENST00000589577 DALRD3Q5D0E6 543 aaKnown RBP8.81□□□□□ -1
VPS25-204ENST00000589577 CCDC87Q9NVE4 849 aa8.81□□□□□ -1
VPS25-204ENST00000589577 AFDNP55196 1824 aaKnown RBP8.81□□□□□ -1
VPS25-204ENST00000589577 KDRP35968 1356 aa8.81□□□□□ -1
VPS25-204ENST00000589577 POTEIP0CG38 1075 aa8.8□□□□□ -1
VPS25-204ENST00000589577 POTEJP0CG39 1038 aa8.8□□□□□ -1
VPS25-204ENST00000589577 CHRNA5P30532 468 aa8.8□□□□□ -1
VPS25-204ENST00000589577 VEGFBP49765 207 aa8.8□□□□□ -1
VPS25-204ENST00000589577 TMF1P82094 1093 aa8.8□□□□□ -1
VPS25-204ENST00000589577 NLGN1Q8N2Q7 840 aa8.8□□□□□ -1
VPS25-204ENST00000589577 A0A1W2PP64 1363 aa8.8□□□□□ -1
VPS25-204ENST00000589577 CCDC85CA6NKD9 419 aa8.79□□□□□ -1
VPS25-204ENST00000589577 AIDAQ96BJ3 306 aa8.79□□□□□ -1
VPS25-204ENST00000589577 ASAP1Q9ULH1 1129 aa8.79□□□□□ -1
VPS25-204ENST00000589577 LTBP1Q14766 1721 aa8.79□□□□□ -1
VPS25-204ENST00000589577 NRXN2Q9P2S2 1712 aa8.79□□□□□ -1
VPS25-204ENST00000589577 FER1L6Q2WGJ9 1857 aa8.79□□□□□ -1
VPS25-204ENST00000589577 PASKQ96RG2 1323 aa8.79□□□□□ -1
VPS25-204ENST00000589577 ADAMTSL1Q8N6G6 1762 aa8.78□□□□□ -1
VPS25-204ENST00000589577 RTL1A6NKG5 1358 aa8.78□□□□□ -1
VPS25-204ENST00000589577 LMNB1P20700 586 aa8.78□□□□□ -1
VPS25-204ENST00000589577 DDR1Q08345 913 aa8.78□□□□□ -1
VPS25-204ENST00000589577 RAPGEF4Q8WZA2 1011 aa8.78□□□□□ -1
VPS25-204ENST00000589577 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
VPS25-204ENST00000589577 SLC4A9Q96Q91 983 aa8.78□□□□□ -1
VPS25-204ENST00000589577 ATP6V1AP38606 617 aa8.77□□□□□ -1.01
VPS25-204ENST00000589577 TRAPPC3LQ5T215 181 aa8.77□□□□□ -1.01
VPS25-204ENST00000589577 CHADLQ6NUI6 762 aa8.77□□□□□ -1.01
VPS25-204ENST00000589577 PARP3Q9Y6F1 533 aa8.77□□□□□ -1.01
VPS25-204ENST00000589577 NFKBIEO00221 500 aa8.76□□□□□ -1.01
VPS25-204ENST00000589577 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
VPS25-204ENST00000589577 AMPHP49418 695 aa8.76□□□□□ -1.01
VPS25-204ENST00000589577 NKX1-1Q15270 411 aaPredicted RBP8.76□□□□□ -1.01
VPS25-204ENST00000589577 SLC12A5Q9H2X9 1139 aa8.76□□□□□ -1.01
VPS25-204ENST00000589577 RTCBQ9Y3I0 505 aaKnown RBP8.76□□□□□ -1.01
VPS25-204ENST00000589577 NCAPD2Q15021 1401 aa8.76□□□□□ -1.01
VPS25-204ENST00000589577 TJP1Q07157 1748 aa8.76□□□□□ -1.01
VPS25-204ENST00000589577 SCN4AP35499 1836 aa8.75□□□□□ -1.01
VPS25-204ENST00000589577 COL11A2P13942 1736 aaPredicted RBP8.75□□□□□ -1.01
VPS25-204ENST00000589577 ADRA2BP18089 450 aa8.75□□□□□ -1.01
VPS25-204ENST00000589577 ATG3Q9NT62 314 aa8.75□□□□□ -1.01
VPS25-204ENST00000589577 ANKRD31Q8N7Z5 1873 aa8.74□□□□□ -1.01
VPS25-204ENST00000589577 FKBP8Q14318 412 aa8.74□□□□□ -1.01
VPS25-204ENST00000589577 RRS1Q15050 365 aaKnown RBP8.74□□□□□ -1.01
VPS25-204ENST00000589577 SRP68Q9UHB9 627 aaKnown RBP8.74□□□□□ -1.01
VPS25-204ENST00000589577 CNTNAP4Q9C0A0 1308 aa8.74□□□□□ -1.01
VPS25-204ENST00000589577 CASP8AP2Q9UKL3 1982 aa8.73□□□□□ -1.01
VPS25-204ENST00000589577 SMG6Q86US8 1419 aaKnown RBP8.73□□□□□ -1.01
VPS25-204ENST00000589577 CACNA1SQ13698 1873 aa8.73□□□□□ -1.01
VPS25-204ENST00000589577 RASSF10A6NK89 507 aa8.73□□□□□ -1.01
VPS25-204ENST00000589577 POLRMTO00411 1230 aaKnown RBP8.73□□□□□ -1.01
VPS25-204ENST00000589577 RPS6KA4O75676 772 aa8.73□□□□□ -1.01
VPS25-204ENST00000589577 ITGBL1O95965 494 aaPredicted RBP8.73□□□□□ -1.01
VPS25-204ENST00000589577 RFC4P35249 363 aa8.73□□□□□ -1.01
VPS25-204ENST00000589577 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
VPS25-204ENST00000589577 HDGFL2Q7Z4V5 671 aaPredicted RBP8.73□□□□□ -1.01
VPS25-204ENST00000589577 TMOD3Q9NYL9 352 aa8.73□□□□□ -1.01
VPS25-204ENST00000589577 ANKRD26Q9UPS8 1709 aa8.73□□□□□ -1.01
VPS25-204ENST00000589577 USP42Q9H9J4 1324 aaKnown RBP8.73□□□□□ -1.01
VPS25-204ENST00000589577 INSRP06213 1382 aa8.73□□□□□ -1.01
VPS25-204ENST00000589577 TMEM88BA6NKF7 163 aa8.72□□□□□ -1.01
VPS25-204ENST00000589577 TMC1Q8TDI8 760 aa8.72□□□□□ -1.01
VPS25-204ENST00000589577 KIF20BQ96Q89 1820 aa8.71□□□□□ -1.01
VPS25-204ENST00000589577 DDNO94850 711 aaPredicted RBP8.71□□□□□ -1.02
VPS25-204ENST00000589577 TM4SF1P30408 202 aa8.71□□□□□ -1.02
VPS25-204ENST00000589577 HSP90AB2PQ58FF8 381 aa8.71□□□□□ -1.02
VPS25-204ENST00000589577 COG3Q96JB2 828 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms