RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 ADAMTS7Q9UKP4 1686 aa23.43■■□□□ 1.34
H3F3B-207ENST00000589417 MRC1P22897 1456 aa23.43■■□□□ 1.34
H3F3B-207ENST00000589417 SPON1Q9HCB6 807 aa23.42■■□□□ 1.34
H3F3B-207ENST00000589417 MAP3K5Q99683 1374 aa23.41■■□□□ 1.34
H3F3B-207ENST00000589417 IL17REQ8NFR9 667 aa23.41■■□□□ 1.34
H3F3B-207ENST00000589417 SLC16A10Q8TF71 515 aa23.41■■□□□ 1.34
H3F3B-207ENST00000589417 CASZ1Q86V15 1759 aa23.41■■□□□ 1.34
H3F3B-207ENST00000589417 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
H3F3B-207ENST00000589417 PLEKHF1Q96S99 279 aa23.4■■□□□ 1.34
H3F3B-207ENST00000589417 TFCP2L1Q9NZI6 479 aa23.4■■□□□ 1.34
H3F3B-207ENST00000589417 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
H3F3B-207ENST00000589417 PNPLA7Q6ZV29 1317 aa23.39■■□□□ 1.34
H3F3B-207ENST00000589417 PNNQ9H307 717 aaKnown RBP23.39■■□□□ 1.33
H3F3B-207ENST00000589417 SCN11AQ9UI33 1791 aa23.39■■□□□ 1.33
H3F3B-207ENST00000589417 HTATSF1O43719 755 aaKnown RBP23.38■■□□□ 1.33
H3F3B-207ENST00000589417 ATP6V1AP38606 617 aa23.38■■□□□ 1.33
H3F3B-207ENST00000589417 ITPK1Q13572 414 aa23.38■■□□□ 1.33
H3F3B-207ENST00000589417 MTFR1LQ9H019 292 aa23.38■■□□□ 1.33
H3F3B-207ENST00000589417 FLAD1Q8NFF5 587 aa23.37■■□□□ 1.33
H3F3B-207ENST00000589417 ZNF831Q5JPB2 1677 aa23.37■■□□□ 1.33
H3F3B-207ENST00000589417 LINC00116Q8NCU8 138 aa23.36■■□□□ 1.33
H3F3B-207ENST00000589417 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
H3F3B-207ENST00000589417 PTGER2P43116 358 aa23.35■■□□□ 1.33
H3F3B-207ENST00000589417 RC3H1Q5TC82 1133 aaKnown RBP23.35■■□□□ 1.33
H3F3B-207ENST00000589417 SGIP1Q9BQI5 828 aa23.35■■□□□ 1.33
H3F3B-207ENST00000589417 ZBTB7AO95365 584 aa23.34■■□□□ 1.33
H3F3B-207ENST00000589417 C5P01031 1676 aa23.34■■□□□ 1.33
H3F3B-207ENST00000589417 NEFMP07197 916 aa23.33■■□□□ 1.33
H3F3B-207ENST00000589417 COL23A1Q86Y22 540 aaPredicted RBP23.33■■□□□ 1.33
H3F3B-207ENST00000589417 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.33
H3F3B-207ENST00000589417 TAF1LQ8IZX4 1826 aa23.32■■□□□ 1.32
H3F3B-207ENST00000589417 TEFQ10587 303 aa23.32■■□□□ 1.32
H3F3B-207ENST00000589417 AK7Q96M32 723 aa23.32■■□□□ 1.32
H3F3B-207ENST00000589417 C4BP0C0L5 1744 aa23.31■■□□□ 1.32
H3F3B-207ENST00000589417 PTCD1O75127 700 aaKnown RBP23.31■■□□□ 1.32
H3F3B-207ENST00000589417 SSFA2P28290 1259 aa23.31■■□□□ 1.32
H3F3B-207ENST00000589417 VSIG10Q8N0Z9 540 aa23.31■■□□□ 1.32
H3F3B-207ENST00000589417 CNTNAP4Q9C0A0 1308 aa23.31■■□□□ 1.32
H3F3B-207ENST00000589417 RTF1Q92541 710 aaKnown RBP23.3■■□□□ 1.32
H3F3B-207ENST00000589417 ATF5Q9Y2D1 282 aaPredicted RBP23.3■■□□□ 1.32
H3F3B-207ENST00000589417 SLC39A6Q13433 755 aa23.29■■□□□ 1.32
H3F3B-207ENST00000589417 NFE2L2Q16236 605 aa23.29■■□□□ 1.32
H3F3B-207ENST00000589417 AMIGO3Q86WK7 504 aa23.29■■□□□ 1.32
H3F3B-207ENST00000589417 CICQ96RK0 1608 aaPredicted RBP23.28■■□□□ 1.32
H3F3B-207ENST00000589417 ZNF790Q6PG37 636 aa23.27■■□□□ 1.32
H3F3B-207ENST00000589417 KCPQ6ZWJ8 1503 aa23.27■■□□□ 1.32
H3F3B-207ENST00000589417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.26■■□□□ 1.31
H3F3B-207ENST00000589417 MAPK8IP3Q9UPT6 1336 aa23.26■■□□□ 1.31
H3F3B-207ENST00000589417 GNPATO15228 680 aa23.25■■□□□ 1.31
H3F3B-207ENST00000589417 RPS6KA4O75676 772 aa23.25■■□□□ 1.31
H3F3B-207ENST00000589417 ADRA2BP18089 450 aa23.25■■□□□ 1.31
H3F3B-207ENST00000589417 MCM10Q7L590 875 aa23.25■■□□□ 1.31
H3F3B-207ENST00000589417 TUBGCP6Q96RT7 1819 aa23.24■■□□□ 1.31
H3F3B-207ENST00000589417 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
H3F3B-207ENST00000589417 TTC5Q8N0Z6 440 aa23.24■■□□□ 1.31
H3F3B-207ENST00000589417 ADAMTS8Q9UP79 889 aa23.24■■□□□ 1.31
H3F3B-207ENST00000589417 RTCBQ9Y3I0 505 aaKnown RBP23.24■■□□□ 1.31
H3F3B-207ENST00000589417 COL24A1Q17RW2 1714 aa23.23■■□□□ 1.31
H3F3B-207ENST00000589417 BTBD11A6QL63 1104 aa23.23■■□□□ 1.31
H3F3B-207ENST00000589417 CRKLP46109 303 aaKnown RBP23.23■■□□□ 1.31
H3F3B-207ENST00000589417 PPP1R1BQ9UD71 204 aaPredicted RBP23.23■■□□□ 1.31
H3F3B-207ENST00000589417 CYP19A1P11511 503 aaPredicted RBP23.22■■□□□ 1.31
H3F3B-207ENST00000589417 DCTN1Q14203 1278 aa23.22■■□□□ 1.31
H3F3B-207ENST00000589417 TAF7Q15545 349 aaPredicted RBP23.22■■□□□ 1.31
H3F3B-207ENST00000589417 INTS5Q6P9B9 1019 aaKnown RBP23.22■■□□□ 1.31
H3F3B-207ENST00000589417 DNAJC10Q8IXB1 793 aa23.22■■□□□ 1.31
H3F3B-207ENST00000589417 ZNF496Q96IT1 587 aaPredicted RBP23.22■■□□□ 1.31
H3F3B-207ENST00000589417 SIPA1L3O60292 1781 aaPredicted RBP23.22■■□□□ 1.31
H3F3B-207ENST00000589417 UBR3Q6ZT12 1888 aa23.22■■□□□ 1.31
H3F3B-207ENST00000589417 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
H3F3B-207ENST00000589417 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
H3F3B-207ENST00000589417 TEX13AQ9BXU3 409 aaPredicted RBP23.21■■□□□ 1.31
H3F3B-207ENST00000589417 COL5A3P25940 1745 aaPredicted RBP23.21■■□□□ 1.31
H3F3B-207ENST00000589417 VIRMAQ69YN4 1812 aaKnown RBP23.2■■□□□ 1.3
H3F3B-207ENST00000589417 HEG1Q9ULI3 1381 aa23.2■■□□□ 1.3
H3F3B-207ENST00000589417 MSH5O43196 834 aa23.2■■□□□ 1.3
H3F3B-207ENST00000589417 ANP32CO43423 234 aa23.2■■□□□ 1.3
H3F3B-207ENST00000589417 POLD1P28340 1107 aa23.2■■□□□ 1.3
H3F3B-207ENST00000589417 TMPOP42166 694 aaKnown RBP23.2■■□□□ 1.3
H3F3B-207ENST00000589417 FMNL2Q96PY5 1086 aa23.2■■□□□ 1.3
H3F3B-207ENST00000589417 ARXQ96QS3 562 aa23.2■■□□□ 1.3
H3F3B-207ENST00000589417 UBR2Q8IWV8 1755 aa23.19■■□□□ 1.3
H3F3B-207ENST00000589417 PHF14O94880 888 aa23.19■■□□□ 1.3
H3F3B-207ENST00000589417 SMIM5Q71RC9 77 aa23.19■■□□□ 1.3
H3F3B-207ENST00000589417 RIPK4P57078 832 aa23.18■■□□□ 1.3
H3F3B-207ENST00000589417 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
H3F3B-207ENST00000589417 ARHGEF1Q92888 912 aaKnown RBP23.18■■□□□ 1.3
H3F3B-207ENST00000589417 CCDC87Q9NVE4 849 aa23.18■■□□□ 1.3
H3F3B-207ENST00000589417 TJP1Q07157 1748 aa23.18■■□□□ 1.3
H3F3B-207ENST00000589417 KCNQ3O43525 872 aa23.17■■□□□ 1.3
H3F3B-207ENST00000589417 STARD3NLO95772 234 aa23.17■■□□□ 1.3
H3F3B-207ENST00000589417 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
H3F3B-207ENST00000589417 MYH14Q7Z406 1995 aaKnown RBP23.15■■□□□ 1.3
H3F3B-207ENST00000589417 CCDC184Q52MB2 194 aa23.15■■□□□ 1.3
H3F3B-207ENST00000589417 BABAM1Q9NWV8 329 aa23.15■■□□□ 1.3
H3F3B-207ENST00000589417 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.3
H3F3B-207ENST00000589417 CCDC146Q8IYE0 955 aa23.14■■□□□ 1.29
H3F3B-207ENST00000589417 SYT17Q9BSW7 474 aa23.14■■□□□ 1.29
H3F3B-207ENST00000589417 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
H3F3B-207ENST00000589417 FHDC1Q9C0D6 1143 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms