RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 AMOTQ4VCS5 1084 aa14.33□□□□□ -0.12
CLPTM1-211ENST00000589347 MPRIPQ6WCQ1 1025 aa14.33□□□□□ -0.12
CLPTM1-211ENST00000589347 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.12
CLPTM1-211ENST00000589347 KDRP35968 1356 aa14.33□□□□□ -0.12
CLPTM1-211ENST00000589347 KIF3CO14782 793 aa14.32□□□□□ -0.12
CLPTM1-211ENST00000589347 PER1O15534 1290 aaPredicted RBP14.32□□□□□ -0.12
CLPTM1-211ENST00000589347 COL5A3P25940 1745 aaPredicted RBP14.32□□□□□ -0.12
CLPTM1-211ENST00000589347 MTHFSP49914 203 aa14.31□□□□□ -0.12
CLPTM1-211ENST00000589347 C1orf141Q5JVX7 400 aa14.31□□□□□ -0.12
CLPTM1-211ENST00000589347 ZNF530Q6P9A1 599 aaPredicted RBP14.31□□□□□ -0.12
CLPTM1-211ENST00000589347 DNAJC5GQ8N7S2 189 aa14.31□□□□□ -0.12
CLPTM1-211ENST00000589347 CD2APQ9Y5K6 639 aa14.31□□□□□ -0.12
CLPTM1-211ENST00000589347 IL13P35225 146 aa14.3□□□□□ -0.12
CLPTM1-211ENST00000589347 APLP1P51693 650 aa14.3□□□□□ -0.12
CLPTM1-211ENST00000589347 SULT6B1Q6IMI4 303 aa14.3□□□□□ -0.12
CLPTM1-211ENST00000589347 ZNF526Q8TF50 670 aaPredicted RBP14.3□□□□□ -0.12
CLPTM1-211ENST00000589347 COL3A1P02461 1466 aaPredicted RBP14.3□□□□□ -0.12
CLPTM1-211ENST00000589347 KCNQ4P56696 695 aa14.29□□□□□ -0.12
CLPTM1-211ENST00000589347 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
CLPTM1-211ENST00000589347 CNGB1Q14028 1251 aaPredicted RBP14.28□□□□□ -0.12
CLPTM1-211ENST00000589347 COL23A1Q86Y22 540 aaPredicted RBP14.28□□□□□ -0.12
CLPTM1-211ENST00000589347 AEBP1Q8IUX7 1158 aa14.28□□□□□ -0.12
CLPTM1-211ENST00000589347 DCAF5Q96JK2 942 aa14.28□□□□□ -0.12
CLPTM1-211ENST00000589347 WDR90Q96KV7 1748 aa14.28□□□□□ -0.12
CLPTM1-211ENST00000589347 CFAP53Q96M91 514 aa14.28□□□□□ -0.12
CLPTM1-211ENST00000589347 ADAMTS7Q9UKP4 1686 aa14.27□□□□□ -0.12
CLPTM1-211ENST00000589347 KDM6AO15550 1401 aaPredicted RBP14.27□□□□□ -0.12
CLPTM1-211ENST00000589347 ERVV-2B6SEH9 535 aa14.27□□□□□ -0.13
CLPTM1-211ENST00000589347 PIGBQ92521 554 aa14.27□□□□□ -0.13
CLPTM1-211ENST00000589347 FLAD1Q8NFF5 587 aa14.26□□□□□ -0.13
CLPTM1-211ENST00000589347 AK7Q96M32 723 aa14.26□□□□□ -0.13
CLPTM1-211ENST00000589347 MRC1P22897 1456 aa14.25□□□□□ -0.13
CLPTM1-211ENST00000589347 TJP1Q07157 1748 aa14.25□□□□□ -0.13
CLPTM1-211ENST00000589347 MSH5O43196 834 aa14.25□□□□□ -0.13
CLPTM1-211ENST00000589347 MSL1Q68DK7 614 aa14.25□□□□□ -0.13
CLPTM1-211ENST00000589347 SIPA1L3O60292 1781 aaPredicted RBP14.24□□□□□ -0.13
CLPTM1-211ENST00000589347 LOC102724428A0A0B4J2F2 783 aa14.24□□□□□ -0.13
CLPTM1-211ENST00000589347 SIK1P57059 783 aa14.24□□□□□ -0.13
CLPTM1-211ENST00000589347 CABP4P57796 275 aa14.24□□□□□ -0.13
CLPTM1-211ENST00000589347 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
CLPTM1-211ENST00000589347 UBR2Q8IWV8 1755 aa14.24□□□□□ -0.13
CLPTM1-211ENST00000589347 C4AP0C0L4 1744 aa14.24□□□□□ -0.13
CLPTM1-211ENST00000589347 HMOX1P09601 288 aa14.23□□□□□ -0.13
CLPTM1-211ENST00000589347 COL13A1Q5TAT6 717 aaPredicted RBP14.23□□□□□ -0.13
CLPTM1-211ENST00000589347 U2SURPO15042 1029 aaKnown RBP14.22□□□□□ -0.13
CLPTM1-211ENST00000589347 TOMM70O94826 608 aa14.22□□□□□ -0.13
CLPTM1-211ENST00000589347 JMYQ8N9B5 988 aa14.22□□□□□ -0.13
CLPTM1-211ENST00000589347 NUDCQ9Y266 331 aa14.22□□□□□ -0.13
CLPTM1-211ENST00000589347 MYH14Q7Z406 1995 aaKnown RBP14.22□□□□□ -0.13
CLPTM1-211ENST00000589347 DLG5Q8TDM6 1919 aa14.21□□□□□ -0.13
CLPTM1-211ENST00000589347 ATP6V1AP38606 617 aa14.21□□□□□ -0.13
CLPTM1-211ENST00000589347 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
CLPTM1-211ENST00000589347 GAS2L2Q8NHY3 880 aa14.2□□□□□ -0.14
CLPTM1-211ENST00000589347 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
CLPTM1-211ENST00000589347 ATG3Q9NT62 314 aa14.2□□□□□ -0.14
CLPTM1-211ENST00000589347 KIAA1551Q9HCM1 1747 aa14.2□□□□□ -0.14
CLPTM1-211ENST00000589347 SSFA2P28290 1259 aa14.19□□□□□ -0.14
CLPTM1-211ENST00000589347 PRELPP51888 382 aa14.19□□□□□ -0.14
CLPTM1-211ENST00000589347 KIF13BQ9NQT8 1826 aa14.18□□□□□ -0.14
CLPTM1-211ENST00000589347 PHF14O94880 888 aa14.18□□□□□ -0.14
CLPTM1-211ENST00000589347 PPP2R1AP30153 589 aa14.18□□□□□ -0.14
CLPTM1-211ENST00000589347 LINC00116Q8NCU8 138 aa14.18□□□□□ -0.14
CLPTM1-211ENST00000589347 KLRG1Q96E93 195 aa14.18□□□□□ -0.14
CLPTM1-211ENST00000589347 GNPATO15228 680 aa14.17□□□□□ -0.14
CLPTM1-211ENST00000589347 CNTNAP4Q9C0A0 1308 aa14.16□□□□□ -0.14
CLPTM1-211ENST00000589347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
CLPTM1-211ENST00000589347 RNMTO43148 476 aaKnown RBP14.16□□□□□ -0.14
CLPTM1-211ENST00000589347 ITPK1Q13572 414 aa14.16□□□□□ -0.14
CLPTM1-211ENST00000589347 MTHFSDQ2M296 383 aaKnown RBP14.16□□□□□ -0.14
CLPTM1-211ENST00000589347 NFATC2IPQ8NCF5 419 aa14.16□□□□□ -0.14
CLPTM1-211ENST00000589347 SLC52A2Q9HAB3 445 aa14.16□□□□□ -0.14
CLPTM1-211ENST00000589347 PXDNLA1KZ92 1463 aa14.16□□□□□ -0.14
CLPTM1-211ENST00000589347 NEFMP07197 916 aa14.15□□□□□ -0.14
CLPTM1-211ENST00000589347 AMIGO3Q86WK7 504 aa14.15□□□□□ -0.14
CLPTM1-211ENST00000589347 RBM46Q8TBY0 533 aaKnown RBP14.15□□□□□ -0.14
CLPTM1-211ENST00000589347 RTCBQ9Y3I0 505 aaKnown RBP14.15□□□□□ -0.14
CLPTM1-211ENST00000589347 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
CLPTM1-211ENST00000589347 GNAT3A8MTJ3 354 aa14.14□□□□□ -0.15
CLPTM1-211ENST00000589347 CAPN15O75808 1086 aa14.14□□□□□ -0.15
CLPTM1-211ENST00000589347 U2AF1L5P0DN76 240 aaPredicted RBP14.14□□□□□ -0.15
CLPTM1-211ENST00000589347 ADRA2BP18089 450 aa14.14□□□□□ -0.15
CLPTM1-211ENST00000589347 U2AF1Q01081 240 aaKnown RBP eCLIP14.14□□□□□ -0.15
CLPTM1-211ENST00000589347 TNS4Q8IZW8 715 aa14.14□□□□□ -0.15
CLPTM1-211ENST00000589347 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
CLPTM1-211ENST00000589347 PTCD1O75127 700 aaKnown RBP14.13□□□□□ -0.15
CLPTM1-211ENST00000589347 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
CLPTM1-211ENST00000589347 TEFQ10587 303 aa14.13□□□□□ -0.15
CLPTM1-211ENST00000589347 RC3H1Q5TC82 1133 aaKnown RBP14.13□□□□□ -0.15
CLPTM1-211ENST00000589347 TTC5Q8N0Z6 440 aa14.13□□□□□ -0.15
CLPTM1-211ENST00000589347 NMRK2Q9NPI5 230 aa14.13□□□□□ -0.15
CLPTM1-211ENST00000589347 LAMB4A4D0S4 1761 aa14.13□□□□□ -0.15
CLPTM1-211ENST00000589347 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
CLPTM1-211ENST00000589347 BRCA1P38398 1863 aaKnown RBP14.12□□□□□ -0.15
CLPTM1-211ENST00000589347 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
CLPTM1-211ENST00000589347 ZEB1P37275 1124 aaPredicted RBP14.11□□□□□ -0.15
CLPTM1-211ENST00000589347 HTRA3P83110 453 aa14.11□□□□□ -0.15
CLPTM1-211ENST00000589347 RALBP1Q15311 655 aa14.11□□□□□ -0.15
CLPTM1-211ENST00000589347 FCHSD2O94868 740 aa14.1□□□□□ -0.15
CLPTM1-211ENST00000589347 FSTL1Q12841 308 aa14.1□□□□□ -0.15
CLPTM1-211ENST00000589347 TRAPPC3LQ5T215 181 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms