RNA–Protein interactions for RNA: ENST00000589343.1

PPP6R1-205, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 904 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-205ENST00000589343 BTBD11A6QL63 1104 aa17.39■□□□□ 0.37
PPP6R1-205ENST00000589343 CHL1O00533 1208 aa17.39■□□□□ 0.37
PPP6R1-205ENST00000589343 FAM182BQ5T319 152 aa17.39■□□□□ 0.37
PPP6R1-205ENST00000589343 ACSBG1Q96GR2 724 aa17.39■□□□□ 0.37
PPP6R1-205ENST00000589343 MYH16Q9H6N6 1097 aa17.39■□□□□ 0.37
PPP6R1-205ENST00000589343 MRC1P22897 1456 aa17.38■□□□□ 0.37
PPP6R1-205ENST00000589343 PIGBQ92521 554 aa17.38■□□□□ 0.37
PPP6R1-205ENST00000589343 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
PPP6R1-205ENST00000589343 TSPYL4Q9UJ04 414 aa17.38■□□□□ 0.37
PPP6R1-205ENST00000589343 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
PPP6R1-205ENST00000589343 SLFN5Q08AF3 891 aa17.37■□□□□ 0.37
PPP6R1-205ENST00000589343 KCNQ2O43526 872 aa17.36■□□□□ 0.37
PPP6R1-205ENST00000589343 TTC5Q8N0Z6 440 aa17.36■□□□□ 0.37
PPP6R1-205ENST00000589343 SMARCC1Q92922 1105 aaPredicted RBP17.36■□□□□ 0.37
PPP6R1-205ENST00000589343 ZNF790Q6PG37 636 aa17.35■□□□□ 0.37
PPP6R1-205ENST00000589343 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
PPP6R1-205ENST00000589343 TRMT2AQ8IZ69 625 aaKnown RBP17.34■□□□□ 0.37
PPP6R1-205ENST00000589343 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
PPP6R1-205ENST00000589343 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
PPP6R1-205ENST00000589343 TRIM37O94972 964 aa17.33■□□□□ 0.36
PPP6R1-205ENST00000589343 CDCA7LQ96GN5 454 aa17.33■□□□□ 0.36
PPP6R1-205ENST00000589343 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
PPP6R1-205ENST00000589343 ATG3Q9NT62 314 aa17.33■□□□□ 0.36
PPP6R1-205ENST00000589343 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.36
PPP6R1-205ENST00000589343 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
PPP6R1-205ENST00000589343 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
PPP6R1-205ENST00000589343 ITGB4P16144 1822 aa17.32■□□□□ 0.36
PPP6R1-205ENST00000589343 DOT1LQ8TEK3 1739 aa17.32■□□□□ 0.36
PPP6R1-205ENST00000589343 FANCIQ9NVI1 1328 aa17.31■□□□□ 0.36
PPP6R1-205ENST00000589343 HMGB2P26583 209 aaKnown RBP17.31■□□□□ 0.36
PPP6R1-205ENST00000589343 CCDC125Q86Z20 511 aa17.31■□□□□ 0.36
PPP6R1-205ENST00000589343 FMNL2Q96PY5 1086 aa17.31■□□□□ 0.36
PPP6R1-205ENST00000589343 CHMP4AQ9BY43 222 aa17.31■□□□□ 0.36
PPP6R1-205ENST00000589343 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
PPP6R1-205ENST00000589343 SIPA1L3O60292 1781 aaPredicted RBP17.3■□□□□ 0.36
PPP6R1-205ENST00000589343 NHSQ6T4R5 1651 aa17.3■□□□□ 0.36
PPP6R1-205ENST00000589343 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
PPP6R1-205ENST00000589343 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
PPP6R1-205ENST00000589343 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
PPP6R1-205ENST00000589343 TSR2Q969E8 191 aaKnown RBP17.3■□□□□ 0.36
PPP6R1-205ENST00000589343 KCNQ3O43525 872 aa17.29■□□□□ 0.36
PPP6R1-205ENST00000589343 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
PPP6R1-205ENST00000589343 PLSCR1O15162 318 aa17.28■□□□□ 0.36
PPP6R1-205ENST00000589343 HOXB7P09629 217 aa17.28■□□□□ 0.36
PPP6R1-205ENST00000589343 CT47B1P0C2W7 299 aaPredicted RBP17.28■□□□□ 0.36
PPP6R1-205ENST00000589343 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
PPP6R1-205ENST00000589343 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
PPP6R1-205ENST00000589343 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
PPP6R1-205ENST00000589343 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
PPP6R1-205ENST00000589343 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
PPP6R1-205ENST00000589343 SNRPA1P09661 255 aaKnown RBP17.27■□□□□ 0.36
PPP6R1-205ENST00000589343 PALLDQ8WX93 1383 aa17.27■□□□□ 0.35
PPP6R1-205ENST00000589343 LOC102724428A0A0B4J2F2 783 aa17.26■□□□□ 0.35
PPP6R1-205ENST00000589343 APBA3O96018 575 aa17.26■□□□□ 0.35
PPP6R1-205ENST00000589343 SIK1P57059 783 aa17.26■□□□□ 0.35
PPP6R1-205ENST00000589343 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
PPP6R1-205ENST00000589343 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
PPP6R1-205ENST00000589343 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
PPP6R1-205ENST00000589343 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
PPP6R1-205ENST00000589343 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
PPP6R1-205ENST00000589343 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
PPP6R1-205ENST00000589343 BTAF1O14981 1849 aa17.24■□□□□ 0.35
PPP6R1-205ENST00000589343 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
PPP6R1-205ENST00000589343 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
PPP6R1-205ENST00000589343 BAG6P46379 1132 aa17.23■□□□□ 0.35
PPP6R1-205ENST00000589343 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
PPP6R1-205ENST00000589343 KCPQ6ZWJ8 1503 aa17.22■□□□□ 0.35
PPP6R1-205ENST00000589343 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
PPP6R1-205ENST00000589343 STARD3NLO95772 234 aa17.22■□□□□ 0.35
PPP6R1-205ENST00000589343 ATP6V1AP38606 617 aa17.22■□□□□ 0.35
PPP6R1-205ENST00000589343 ELL2O00472 640 aaPredicted RBP17.21■□□□□ 0.35
PPP6R1-205ENST00000589343 VAMP4O75379 141 aa17.21■□□□□ 0.35
PPP6R1-205ENST00000589343 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
PPP6R1-205ENST00000589343 TSPYL6Q8N831 410 aa17.21■□□□□ 0.35
PPP6R1-205ENST00000589343 CCNL1Q9UK58 526 aaPredicted RBP17.21■□□□□ 0.35
PPP6R1-205ENST00000589343 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
PPP6R1-205ENST00000589343 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
PPP6R1-205ENST00000589343 SLC4A9Q96Q91 983 aa17.2■□□□□ 0.34
PPP6R1-205ENST00000589343 TXNRD1Q16881 649 aa17.19■□□□□ 0.34
PPP6R1-205ENST00000589343 DNAJC10Q8IXB1 793 aa17.19■□□□□ 0.34
PPP6R1-205ENST00000589343 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
PPP6R1-205ENST00000589343 HDGFL1Q5TGJ6 251 aa17.18■□□□□ 0.34
PPP6R1-205ENST00000589343 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
PPP6R1-205ENST00000589343 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
PPP6R1-205ENST00000589343 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
PPP6R1-205ENST00000589343 EP400Q96L91 3159 aa17.18■□□□□ 0.34
PPP6R1-205ENST00000589343 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
PPP6R1-205ENST00000589343 ZNF831Q5JPB2 1677 aa17.17■□□□□ 0.34
PPP6R1-205ENST00000589343 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
PPP6R1-205ENST00000589343 CYP19A1P11511 503 aaPredicted RBP17.17■□□□□ 0.34
PPP6R1-205ENST00000589343 ALDH1L2Q3SY69 923 aa17.17■□□□□ 0.34
PPP6R1-205ENST00000589343 CAMKK2Q96RR4 588 aa17.17■□□□□ 0.34
PPP6R1-205ENST00000589343 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
PPP6R1-205ENST00000589343 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
PPP6R1-205ENST00000589343 ITPK1Q13572 414 aa17.16■□□□□ 0.34
PPP6R1-205ENST00000589343 RC3H1Q5TC82 1133 aaKnown RBP17.16■□□□□ 0.34
PPP6R1-205ENST00000589343 PROM2Q8N271 834 aa17.16■□□□□ 0.34
PPP6R1-205ENST00000589343 DBF4Q9UBU7 674 aaPredicted RBP17.16■□□□□ 0.34
PPP6R1-205ENST00000589343 LY75O60449 1722 aa17.16■□□□□ 0.34
PPP6R1-205ENST00000589343 TNS1Q9HBL0 1735 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms