RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CHL1O00533 1208 aa15.88■□□□□ 0.13
DNMT1-218ENST00000589294 ZNF853P0CG23 659 aa15.88■□□□□ 0.13
DNMT1-218ENST00000589294 GNAI1P63096 354 aa15.88■□□□□ 0.13
DNMT1-218ENST00000589294 IFT57Q9NWB7 429 aa15.88■□□□□ 0.13
DNMT1-218ENST00000589294 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
DNMT1-218ENST00000589294 MRC1P22897 1456 aa15.87■□□□□ 0.13
DNMT1-218ENST00000589294 EP400Q96L91 3159 aa15.87■□□□□ 0.13
DNMT1-218ENST00000589294 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
DNMT1-218ENST00000589294 SMARCC1Q92922 1105 aaPredicted RBP15.87■□□□□ 0.13
DNMT1-218ENST00000589294 ILDR2Q71H61 639 aa15.86■□□□□ 0.13
DNMT1-218ENST00000589294 PTF1AQ7RTS3 328 aa15.86■□□□□ 0.13
DNMT1-218ENST00000589294 ATG3Q9NT62 314 aa15.86■□□□□ 0.13
DNMT1-218ENST00000589294 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
DNMT1-218ENST00000589294 PLSCR1O15162 318 aa15.85■□□□□ 0.13
DNMT1-218ENST00000589294 ZNF790Q6PG37 636 aa15.85■□□□□ 0.13
DNMT1-218ENST00000589294 ASAP1Q9ULH1 1129 aa15.85■□□□□ 0.13
DNMT1-218ENST00000589294 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
DNMT1-218ENST00000589294 APBA3O96018 575 aa15.84■□□□□ 0.13
DNMT1-218ENST00000589294 SF3B2Q13435 895 aaKnown RBP15.84■□□□□ 0.13
DNMT1-218ENST00000589294 TTC5Q8N0Z6 440 aa15.84■□□□□ 0.13
DNMT1-218ENST00000589294 MYH16Q9H6N6 1097 aa15.84■□□□□ 0.13
DNMT1-218ENST00000589294 MIS18AQ9NYP9 233 aa15.84■□□□□ 0.13
DNMT1-218ENST00000589294 TSPYL4Q9UJ04 414 aa15.84■□□□□ 0.13
DNMT1-218ENST00000589294 TOGARAM1Q9Y4F4 1720 aa15.84■□□□□ 0.13
DNMT1-218ENST00000589294 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
DNMT1-218ENST00000589294 NHSQ6T4R5 1651 aa15.83■□□□□ 0.13
DNMT1-218ENST00000589294 DOT1LQ8TEK3 1739 aa15.83■□□□□ 0.13
DNMT1-218ENST00000589294 ITGB4P16144 1822 aa15.83■□□□□ 0.12
DNMT1-218ENST00000589294 E9PSI1 815 aa15.83■□□□□ 0.12
DNMT1-218ENST00000589294 SLC39A6Q13433 755 aa15.83■□□□□ 0.12
DNMT1-218ENST00000589294 HMGB2P26583 209 aaKnown RBP15.82■□□□□ 0.12
DNMT1-218ENST00000589294 SLFN5Q08AF3 891 aa15.82■□□□□ 0.12
DNMT1-218ENST00000589294 TRMT2AQ8IZ69 625 aaKnown RBP15.81■□□□□ 0.12
DNMT1-218ENST00000589294 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
DNMT1-218ENST00000589294 FMNL2Q96PY5 1086 aa15.81■□□□□ 0.12
DNMT1-218ENST00000589294 MBIPQ9NS73 344 aa15.81■□□□□ 0.12
DNMT1-218ENST00000589294 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
DNMT1-218ENST00000589294 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
DNMT1-218ENST00000589294 KCNQ3O43525 872 aa15.8■□□□□ 0.12
DNMT1-218ENST00000589294 EIF4A1P60842 406 aaKnown RBP15.8■□□□□ 0.12
DNMT1-218ENST00000589294 UPF1Q92900 1129 aaKnown RBP eCLIP15.8■□□□□ 0.12
DNMT1-218ENST00000589294 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
DNMT1-218ENST00000589294 PALLDQ8WX93 1383 aa15.79■□□□□ 0.12
DNMT1-218ENST00000589294 PTCD1O75127 700 aaKnown RBP15.79■□□□□ 0.12
DNMT1-218ENST00000589294 SLC27A3Q5K4L6 730 aa15.79■□□□□ 0.12
DNMT1-218ENST00000589294 CDCA7LQ96GN5 454 aa15.79■□□□□ 0.12
DNMT1-218ENST00000589294 ZNF496Q96IT1 587 aaPredicted RBP15.79■□□□□ 0.12
DNMT1-218ENST00000589294 YTHDC1Q96MU7 727 aaKnown RBP15.79■□□□□ 0.12
DNMT1-218ENST00000589294 TEX13AQ9BXU3 409 aaPredicted RBP15.79■□□□□ 0.12
DNMT1-218ENST00000589294 LOC102724428A0A0B4J2F2 783 aa15.78■□□□□ 0.12
DNMT1-218ENST00000589294 BAG6P46379 1132 aa15.78■□□□□ 0.12
DNMT1-218ENST00000589294 SIK1P57059 783 aa15.78■□□□□ 0.12
DNMT1-218ENST00000589294 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
DNMT1-218ENST00000589294 BTAF1O14981 1849 aa15.78■□□□□ 0.12
DNMT1-218ENST00000589294 HEG1Q9ULI3 1381 aa15.77■□□□□ 0.12
DNMT1-218ENST00000589294 FANCIQ9NVI1 1328 aa15.77■□□□□ 0.12
DNMT1-218ENST00000589294 SNRPA1P09661 255 aaKnown RBP15.77■□□□□ 0.12
DNMT1-218ENST00000589294 TSR2Q969E8 191 aaKnown RBP15.77■□□□□ 0.12
DNMT1-218ENST00000589294 CAMKK2Q96RR4 588 aa15.77■□□□□ 0.12
DNMT1-218ENST00000589294 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
DNMT1-218ENST00000589294 SOS1Q07889 1333 aaPredicted RBP15.76■□□□□ 0.11
DNMT1-218ENST00000589294 GIGYF1O75420 1035 aaPredicted RBP15.76■□□□□ 0.11
DNMT1-218ENST00000589294 ATP6V1AP38606 617 aa15.76■□□□□ 0.11
DNMT1-218ENST00000589294 PROM2Q8N271 834 aa15.76■□□□□ 0.11
DNMT1-218ENST00000589294 HOXB7P09629 217 aa15.75■□□□□ 0.11
DNMT1-218ENST00000589294 TXNRD1Q16881 649 aa15.75■□□□□ 0.11
DNMT1-218ENST00000589294 DUSP27Q5VZP5 1158 aa15.75■□□□□ 0.11
DNMT1-218ENST00000589294 SLC4A9Q96Q91 983 aa15.75■□□□□ 0.11
DNMT1-218ENST00000589294 CCNL1Q9UK58 526 aaPredicted RBP15.75■□□□□ 0.11
DNMT1-218ENST00000589294 EN1Q05925 392 aaPredicted RBP15.74■□□□□ 0.11
DNMT1-218ENST00000589294 KCPQ6ZWJ8 1503 aa15.73■□□□□ 0.11
DNMT1-218ENST00000589294 PAPPAQ13219 1627 aa15.73■□□□□ 0.11
DNMT1-218ENST00000589294 KDM3BQ7LBC6 1761 aa15.73■□□□□ 0.11
DNMT1-218ENST00000589294 STARD3NLO95772 234 aa15.73■□□□□ 0.11
DNMT1-218ENST00000589294 EXOSC9Q06265 439 aaKnown RBP15.73■□□□□ 0.11
DNMT1-218ENST00000589294 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
DNMT1-218ENST00000589294 TNS1Q9HBL0 1735 aaKnown RBP15.73■□□□□ 0.11
DNMT1-218ENST00000589294 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
DNMT1-218ENST00000589294 DEFB132Q7Z7B7 95 aa15.72■□□□□ 0.11
DNMT1-218ENST00000589294 LRRC4BQ9NT99 713 aa15.72■□□□□ 0.11
DNMT1-218ENST00000589294 VAMP4O75379 141 aa15.71■□□□□ 0.11
DNMT1-218ENST00000589294 CT47B1P0C2W7 299 aaPredicted RBP15.71■□□□□ 0.11
DNMT1-218ENST00000589294 ITPK1Q13572 414 aa15.71■□□□□ 0.11
DNMT1-218ENST00000589294 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
DNMT1-218ENST00000589294 TWISTNBQ3B726 338 aaPredicted RBP15.71■□□□□ 0.11
DNMT1-218ENST00000589294 RC3H1Q5TC82 1133 aaKnown RBP15.71■□□□□ 0.11
DNMT1-218ENST00000589294 DNAJC10Q8IXB1 793 aa15.71■□□□□ 0.11
DNMT1-218ENST00000589294 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
DNMT1-218ENST00000589294 UBR2Q8IWV8 1755 aa15.71■□□□□ 0.11
DNMT1-218ENST00000589294 ZNF831Q5JPB2 1677 aa15.7■□□□□ 0.1
DNMT1-218ENST00000589294 ELL2O00472 640 aaPredicted RBP15.7■□□□□ 0.1
DNMT1-218ENST00000589294 CYP19A1P11511 503 aaPredicted RBP15.7■□□□□ 0.1
DNMT1-218ENST00000589294 TSPYL6Q8N831 410 aa15.7■□□□□ 0.1
DNMT1-218ENST00000589294 ZNF428Q96B54 188 aa15.7■□□□□ 0.1
DNMT1-218ENST00000589294 RGPD3A6NKT7 1758 aaPredicted RBP15.7■□□□□ 0.1
DNMT1-218ENST00000589294 RGPD4Q7Z3J3 1758 aa15.7■□□□□ 0.1
DNMT1-218ENST00000589294 LY75O60449 1722 aa15.69■□□□□ 0.1
DNMT1-218ENST00000589294 PRAMEF22A3QJZ6 481 aa15.69■□□□□ 0.1
DNMT1-218ENST00000589294 KCNQ4P56696 695 aa15.69■□□□□ 0.1
DNMT1-218ENST00000589294 CCDC30Q5VVM6 783 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms