RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 ONECUT3O60422 494 aaPredicted RBP32.05■■■□□ 2.72
RFX1-205ENST00000589239 BTBD11A6QL63 1104 aa32.05■■■□□ 2.72
RFX1-205ENST00000589239 CABP4P57796 275 aa32.03■■■□□ 2.72
RFX1-205ENST00000589239 MRC1P22897 1456 aa32.03■■■□□ 2.72
RFX1-205ENST00000589239 TSHZ2Q9NRE2 1034 aa32.03■■■□□ 2.72
RFX1-205ENST00000589239 BABAM1Q9NWV8 329 aa32.03■■■□□ 2.72
RFX1-205ENST00000589239 SIPA1L3O60292 1781 aaPredicted RBP32.02■■■□□ 2.72
RFX1-205ENST00000589239 ERVV-2B6SEH9 535 aa32.02■■■□□ 2.72
RFX1-205ENST00000589239 ILDR1Q86SU0 546 aaPredicted RBP32.02■■■□□ 2.72
RFX1-205ENST00000589239 ANP32EQ9BTT0 268 aa32.02■■■□□ 2.72
RFX1-205ENST00000589239 RCAN3Q9UKA8 241 aa32.02■■■□□ 2.72
RFX1-205ENST00000589239 KRT24Q2M2I5 525 aa32.01■■■□□ 2.71
RFX1-205ENST00000589239 SEPT12Q8IYM1 358 aa32.01■■■□□ 2.71
RFX1-205ENST00000589239 RGS17Q9UGC6 210 aaPredicted RBP32.01■■■□□ 2.71
RFX1-205ENST00000589239 TOGARAM1Q9Y4F4 1720 aa32.01■■■□□ 2.71
RFX1-205ENST00000589239 C8orf58Q8NAV2 365 aa32■■■□□ 2.71
RFX1-205ENST00000589239 ELL2O00472 640 aaPredicted RBP31.99■■■□□ 2.71
RFX1-205ENST00000589239 KCNQ3O43525 872 aa31.99■■■□□ 2.71
RFX1-205ENST00000589239 TSPYL6Q8N831 410 aa31.99■■■□□ 2.71
RFX1-205ENST00000589239 RBM6P78332 1123 aaKnown RBP31.98■■■□□ 2.71
RFX1-205ENST00000589239 SLC39A6Q13433 755 aa31.96■■■□□ 2.71
RFX1-205ENST00000589239 KDM3BQ7LBC6 1761 aa31.95■■■□□ 2.71
RFX1-205ENST00000589239 TWISTNBQ3B726 338 aaPredicted RBP31.94■■■□□ 2.7
RFX1-205ENST00000589239 TMOD3Q9NYL9 352 aa31.94■■■□□ 2.7
RFX1-205ENST00000589239 ZNF790Q6PG37 636 aa31.93■■■□□ 2.7
RFX1-205ENST00000589239 CT47B1P0C2W7 299 aaPredicted RBP31.93■■■□□ 2.7
RFX1-205ENST00000589239 SYTL4Q96C24 671 aaPredicted RBP31.93■■■□□ 2.7
RFX1-205ENST00000589239 VAMP4O75379 141 aa31.92■■■□□ 2.7
RFX1-205ENST00000589239 EIF4A1P60842 406 aaKnown RBP31.92■■■□□ 2.7
RFX1-205ENST00000589239 FAM182BQ5T319 152 aa31.92■■■□□ 2.7
RFX1-205ENST00000589239 ACSBG1Q96GR2 724 aa31.91■■■□□ 2.7
RFX1-205ENST00000589239 RXRBP28702 533 aa31.91■■■□□ 2.7
RFX1-205ENST00000589239 POTEAQ6S8J7 498 aa31.91■■■□□ 2.7
RFX1-205ENST00000589239 PIGBQ92521 554 aa31.91■■■□□ 2.7
RFX1-205ENST00000589239 DOT1LQ8TEK3 1739 aa31.9■■■□□ 2.7
RFX1-205ENST00000589239 PRIM1P49642 420 aaKnown RBP31.9■■■□□ 2.7
RFX1-205ENST00000589239 KAT6BQ8WYB5 2073 aa31.9■■■□□ 2.7
RFX1-205ENST00000589239 RARSP54136 660 aaKnown RBP31.89■■■□□ 2.7
RFX1-205ENST00000589239 ITGB4P16144 1822 aa31.88■■■□□ 2.69
RFX1-205ENST00000589239 BCAR3O75815 825 aa31.88■■■□□ 2.69
RFX1-205ENST00000589239 TTC5Q8N0Z6 440 aa31.88■■■□□ 2.69
RFX1-205ENST00000589239 BCL2L13Q9BXK5 485 aa31.87■■■□□ 2.69
RFX1-205ENST00000589239 BCL9O00512 1426 aa31.87■■■□□ 2.69
RFX1-205ENST00000589239 ZNF496Q96IT1 587 aaPredicted RBP31.84■■■□□ 2.69
RFX1-205ENST00000589239 SSH1Q8WYL5 1049 aa31.84■■■□□ 2.69
RFX1-205ENST00000589239 EP400Q96L91 3159 aa31.83■■■□□ 2.69
RFX1-205ENST00000589239 KCNQ2O43526 872 aa31.83■■■□□ 2.69
RFX1-205ENST00000589239 ASAP1Q9ULH1 1129 aa31.83■■■□□ 2.69
RFX1-205ENST00000589239 KRT27Q7Z3Y8 459 aa31.82■■■□□ 2.69
RFX1-205ENST00000589239 HEG1Q9ULI3 1381 aa31.82■■■□□ 2.68
RFX1-205ENST00000589239 TCERG1O14776 1098 aaKnown RBP31.82■■■□□ 2.68
RFX1-205ENST00000589239 ZNF428Q96B54 188 aa31.82■■■□□ 2.68
RFX1-205ENST00000589239 BRWD3Q6RI45 1802 aa31.82■■■□□ 2.68
RFX1-205ENST00000589239 ATG3Q9NT62 314 aa31.81■■■□□ 2.68
RFX1-205ENST00000589239 SMC4Q9NTJ3 1288 aa31.81■■■□□ 2.68
RFX1-205ENST00000589239 PAPPAQ13219 1627 aa31.81■■■□□ 2.68
RFX1-205ENST00000589239 PRAMEF22A3QJZ6 481 aa31.8■■■□□ 2.68
RFX1-205ENST00000589239 GIGYF1O75420 1035 aaPredicted RBP31.8■■■□□ 2.68
RFX1-205ENST00000589239 RNF123Q5XPI4 1314 aa31.8■■■□□ 2.68
RFX1-205ENST00000589239 FMNL2Q96PY5 1086 aa31.79■■■□□ 2.68
RFX1-205ENST00000589239 RRP1P56182 461 aaKnown RBP31.79■■■□□ 2.68
RFX1-205ENST00000589239 RGS12O14924 1447 aa31.79■■■□□ 2.68
RFX1-205ENST00000589239 PTCD1O75127 700 aaKnown RBP31.78■■■□□ 2.68
RFX1-205ENST00000589239 ALDH1L2Q3SY69 923 aa31.78■■■□□ 2.68
RFX1-205ENST00000589239 PLIN1O60240 522 aa31.78■■■□□ 2.68
RFX1-205ENST00000589239 NECTIN2Q92692 538 aa31.78■■■□□ 2.68
RFX1-205ENST00000589239 SOS1Q07889 1333 aaPredicted RBP31.77■■■□□ 2.68
RFX1-205ENST00000589239 KCPQ6ZWJ8 1503 aa31.77■■■□□ 2.68
RFX1-205ENST00000589239 HOXB7P09629 217 aa31.76■■■□□ 2.68
RFX1-205ENST00000589239 PTF1AQ7RTS3 328 aa31.76■■■□□ 2.68
RFX1-205ENST00000589239 EIF2S2P20042 333 aaKnown RBP31.75■■■□□ 2.67
RFX1-205ENST00000589239 UBR2Q8IWV8 1755 aa31.75■■■□□ 2.67
RFX1-205ENST00000589239 HDGFL1Q5TGJ6 251 aa31.75■■■□□ 2.67
RFX1-205ENST00000589239 SNRPA1P09661 255 aaKnown RBP31.73■■■□□ 2.67
RFX1-205ENST00000589239 MRPL50Q8N5N7 158 aaKnown RBP31.73■■■□□ 2.67
RFX1-205ENST00000589239 FRAT1Q92837 279 aaPredicted RBP31.73■■■□□ 2.67
RFX1-205ENST00000589239 CCDC30Q5VVM6 783 aa31.72■■■□□ 2.67
RFX1-205ENST00000589239 IRX6P78412 446 aaPredicted RBP31.71■■■□□ 2.67
RFX1-205ENST00000589239 FAM196AQ6ZSG2 479 aa31.71■■■□□ 2.67
RFX1-205ENST00000589239 RBM42Q9BTD8 480 aaKnown RBP31.7■■■□□ 2.67
RFX1-205ENST00000589239 C5P01031 1676 aa31.7■■■□□ 2.67
RFX1-205ENST00000589239 USP16Q9Y5T5 823 aa31.69■■■□□ 2.66
RFX1-205ENST00000589239 NHSQ6T4R5 1651 aa31.69■■■□□ 2.66
RFX1-205ENST00000589239 SLC4A2P04920 1241 aa31.68■■■□□ 2.66
RFX1-205ENST00000589239 CANXP27824 592 aaKnown RBP31.68■■■□□ 2.66
RFX1-205ENST00000589239 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.68■■■□□ 2.66
RFX1-205ENST00000589239 NOB1Q9ULX3 412 aaKnown RBP31.68■■■□□ 2.66
RFX1-205ENST00000589239 BRPF1P55201 1214 aaPredicted RBP31.67■■■□□ 2.66
RFX1-205ENST00000589239 STK31Q9BXU1 1019 aa31.67■■■□□ 2.66
RFX1-205ENST00000589239 SBF2Q86WG5 1849 aa31.67■■■□□ 2.66
RFX1-205ENST00000589239 SLC4A9Q96Q91 983 aa31.66■■■□□ 2.66
RFX1-205ENST00000589239 KIF16BQ96L93 1317 aa31.66■■■□□ 2.66
RFX1-205ENST00000589239 CHPF2Q9P2E5 772 aa31.66■■■□□ 2.66
RFX1-205ENST00000589239 PALLDQ8WX93 1383 aa31.65■■■□□ 2.66
RFX1-205ENST00000589239 NEFLP07196 543 aa31.64■■■□□ 2.66
RFX1-205ENST00000589239 C20orf194Q5TEA3 1177 aa31.64■■■□□ 2.66
RFX1-205ENST00000589239 VSIG10Q8N0Z9 540 aa31.64■■■□□ 2.66
RFX1-205ENST00000589239 CHMP4AQ9BY43 222 aa31.64■■■□□ 2.66
RFX1-205ENST00000589239 SMARCC1Q92922 1105 aaPredicted RBP31.63■■■□□ 2.65
RFX1-205ENST00000589239 BCL11BQ9C0K0 894 aaPredicted RBP31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms