RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
RETREG3-207ENST00000589007 DPEP1P16444 411 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 TGFB2P61812 414 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 PIGBQ92521 554 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 AK7Q96M32 723 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 SLC12A5Q9H2X9 1139 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 BCS1LQ9Y276 419 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 PCDH11XQ9BZA7 1347 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 PCDH11YQ9BZA8 1340 aa12.07□□□□□ -0.48
RETREG3-207ENST00000589007 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
RETREG3-207ENST00000589007 L3MBTL2Q969R5 705 aa12.06□□□□□ -0.48
RETREG3-207ENST00000589007 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
RETREG3-207ENST00000589007 POTECB2RU33 542 aa12.04□□□□□ -0.48
RETREG3-207ENST00000589007 SIK1P57059 783 aa12.04□□□□□ -0.48
RETREG3-207ENST00000589007 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-207ENST00000589007 MPRIPQ6WCQ1 1025 aa12.04□□□□□ -0.48
RETREG3-207ENST00000589007 RRAGCQ9HB90 399 aa12.04□□□□□ -0.48
RETREG3-207ENST00000589007 INSRP06213 1382 aa12.04□□□□□ -0.48
RETREG3-207ENST00000589007 ARFGEF2Q9Y6D5 1785 aa12.03□□□□□ -0.48
RETREG3-207ENST00000589007 GYS1P13807 737 aa12.03□□□□□ -0.48
RETREG3-207ENST00000589007 ARHGAP27Q6ZUM4 889 aa12.03□□□□□ -0.48
RETREG3-207ENST00000589007 GNPATO15228 680 aa12.02□□□□□ -0.49
RETREG3-207ENST00000589007 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.49
RETREG3-207ENST00000589007 SMC1BQ8NDV3 1235 aa12.02□□□□□ -0.49
RETREG3-207ENST00000589007 FCHSD2O94868 740 aa12.01□□□□□ -0.49
RETREG3-207ENST00000589007 DDR1Q08345 913 aa12.01□□□□□ -0.49
RETREG3-207ENST00000589007 SMARCC1Q92922 1105 aaPredicted RBP12.01□□□□□ -0.49
RETREG3-207ENST00000589007 RNF181Q9P0P0 153 aa12.01□□□□□ -0.49
RETREG3-207ENST00000589007 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
RETREG3-207ENST00000589007 CACNA1SQ13698 1873 aa12□□□□□ -0.49
RETREG3-207ENST00000589007 FOXN1O15353 648 aa12□□□□□ -0.49
RETREG3-207ENST00000589007 RASSF7Q02833 373 aa12□□□□□ -0.49
RETREG3-207ENST00000589007 KDM2BQ8NHM5 1336 aa12□□□□□ -0.49
RETREG3-207ENST00000589007 LTBP1Q14766 1721 aa12□□□□□ -0.49
RETREG3-207ENST00000589007 HSP90AB2PQ58FF8 381 aa11.99□□□□□ -0.49
RETREG3-207ENST00000589007 HDGFL2Q7Z4V5 671 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-207ENST00000589007 ZC3H4Q9UPT8 1303 aaKnown RBP11.99□□□□□ -0.49
RETREG3-207ENST00000589007 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
RETREG3-207ENST00000589007 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
RETREG3-207ENST00000589007 SMG6Q86US8 1419 aaKnown RBP11.98□□□□□ -0.49
RETREG3-207ENST00000589007 FLT4P35916 1363 aa11.98□□□□□ -0.49
RETREG3-207ENST00000589007 KIF24Q5T7B8 1368 aa11.98□□□□□ -0.49
RETREG3-207ENST00000589007 CNTNAP4Q9C0A0 1308 aa11.98□□□□□ -0.49
RETREG3-207ENST00000589007 TATP17735 454 aaPredicted RBP11.98□□□□□ -0.49
RETREG3-207ENST00000589007 C16orf71Q8IYS4 520 aaPredicted RBP11.98□□□□□ -0.49
RETREG3-207ENST00000589007 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
RETREG3-207ENST00000589007 AMPHP49418 695 aa11.97□□□□□ -0.49
RETREG3-207ENST00000589007 RAPGEF4Q8WZA2 1011 aa11.97□□□□□ -0.49
RETREG3-207ENST00000589007 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
RETREG3-207ENST00000589007 TESK2Q96S53 571 aa11.97□□□□□ -0.49
RETREG3-207ENST00000589007 SCN7AQ01118 1682 aa11.97□□□□□ -0.49
RETREG3-207ENST00000589007 CNTNAP1P78357 1384 aa11.96□□□□□ -0.49
RETREG3-207ENST00000589007 CHRNA5P30532 468 aa11.96□□□□□ -0.49
RETREG3-207ENST00000589007 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
RETREG3-207ENST00000589007 TMC1Q8TDI8 760 aa11.96□□□□□ -0.49
RETREG3-207ENST00000589007 PUS7Q96PZ0 661 aaKnown RBP11.96□□□□□ -0.49
RETREG3-207ENST00000589007 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.49
RETREG3-207ENST00000589007 SCN4AP35499 1836 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 CARMIL3Q8ND23 1372 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 NFKBIEO00221 500 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 ATP6V1AP38606 617 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 TMF1P82094 1093 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 NLGN1Q8N2Q7 840 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 COG3Q96JB2 828 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 PRDM10Q9NQV6 1147 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 PCDH10Q9P2E7 1040 aa11.95□□□□□ -0.5
RETREG3-207ENST00000589007 PASKQ96RG2 1323 aa11.94□□□□□ -0.5
RETREG3-207ENST00000589007 GLTPD2A6NH11 291 aa11.94□□□□□ -0.5
RETREG3-207ENST00000589007 FYB1O15117 783 aa11.94□□□□□ -0.5
RETREG3-207ENST00000589007 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
RETREG3-207ENST00000589007 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
RETREG3-207ENST00000589007 ADRA2BP18089 450 aa11.94□□□□□ -0.5
RETREG3-207ENST00000589007 TERF2IPQ9NYB0 399 aa11.94□□□□□ -0.5
RETREG3-207ENST00000589007 PIM2Q9P1W9 311 aa11.94□□□□□ -0.5
RETREG3-207ENST00000589007 USP42Q9H9J4 1324 aaKnown RBP11.93□□□□□ -0.5
RETREG3-207ENST00000589007 POLRMTO00411 1230 aaKnown RBP11.93□□□□□ -0.5
RETREG3-207ENST00000589007 PHKG2P15735 406 aa11.93□□□□□ -0.5
RETREG3-207ENST00000589007 HMGB2P26583 209 aaKnown RBP11.93□□□□□ -0.5
RETREG3-207ENST00000589007 FKBP8Q14318 412 aa11.93□□□□□ -0.5
RETREG3-207ENST00000589007 DALRD3Q5D0E6 543 aaKnown RBP11.93□□□□□ -0.5
RETREG3-207ENST00000589007 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
RETREG3-207ENST00000589007 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
RETREG3-207ENST00000589007 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
RETREG3-207ENST00000589007 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
RETREG3-207ENST00000589007 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
RETREG3-207ENST00000589007 MKRN1Q9UHC7 482 aaKnown RBP11.92□□□□□ -0.5
RETREG3-207ENST00000589007 SLX4Q8IY92 1834 aa11.92□□□□□ -0.5
RETREG3-207ENST00000589007 VEGFAP15692 232 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-207ENST00000589007 RGS19P49795 217 aa11.91□□□□□ -0.5
RETREG3-207ENST00000589007 TRAPPC3LQ5T215 181 aa11.91□□□□□ -0.5
RETREG3-207ENST00000589007 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
RETREG3-207ENST00000589007 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
RETREG3-207ENST00000589007 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
RETREG3-207ENST00000589007 EMILIN1Q9Y6C2 1016 aa11.91□□□□□ -0.5
RETREG3-207ENST00000589007 BCORQ6W2J9 1755 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms