RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 NAIPQ13075 1403 aa2.58□□□□□ -2
ZNF260-203ENST00000588993 RASSF10A6NK89 507 aa2.58□□□□□ -2
ZNF260-203ENST00000588993 VEGFAP15692 232 aaPredicted RBP2.58□□□□□ -2
ZNF260-203ENST00000588993 TOGARAM1Q9Y4F4 1720 aa2.58□□□□□ -2
ZNF260-203ENST00000588993 CRB1P82279 1406 aa2.58□□□□□ -2
ZNF260-203ENST00000588993 PRDM6Q9NQX0 595 aa2.58□□□□□ -2
ZNF260-203ENST00000588993 ANKRD30AQ9BXX3 1397 aa2.58□□□□□ -2
ZNF260-203ENST00000588993 TAF1LQ8IZX4 1826 aa2.58□□□□□ -2
ZNF260-203ENST00000588993 OCEL1Q9H607 264 aa2.58□□□□□ -2
ZNF260-203ENST00000588993 YBX3P16989 372 aaKnown RBP eCLIP2.57□□□□□ -2
ZNF260-203ENST00000588993 INTS3Q68E01 1043 aaKnown RBP2.57□□□□□ -2
ZNF260-203ENST00000588993 SLC4A1APQ9BWU0 796 aaKnown RBP2.57□□□□□ -2
ZNF260-203ENST00000588993 LRRC4BQ9NT99 713 aa2.57□□□□□ -2
ZNF260-203ENST00000588993 BTG4Q9NY30 223 aa2.57□□□□□ -2
ZNF260-203ENST00000588993 ABCC11Q96J66 1382 aa2.57□□□□□ -2
ZNF260-203ENST00000588993 ANO8Q9HCE9 1232 aaPredicted RBP2.57□□□□□ -2
ZNF260-203ENST00000588993 NSD2O96028 1365 aa2.57□□□□□ -2
ZNF260-203ENST00000588993 VGFO15240 615 aaPredicted RBP2.57□□□□□ -2
ZNF260-203ENST00000588993 ESCO1Q5FWF5 840 aa2.57□□□□□ -2
ZNF260-203ENST00000588993 MAST2Q6P0Q8 1798 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 N4BP2Q86UW6 1770 aaPredicted RBP2.56□□□□□ -2
ZNF260-203ENST00000588993 IQCA1LA6NCM1 817 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 TMEM88BA6NKF7 163 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 TK2O00142 265 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 LBX1P52954 281 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 FAM163AQ96GL9 167 aaPredicted RBP2.56□□□□□ -2
ZNF260-203ENST00000588993 PHF8Q9UPP1 1060 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 HRO43593 1189 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 FAM109BQ6ICB4 259 aaPredicted RBP2.56□□□□□ -2
ZNF260-203ENST00000588993 SNX27Q96L92 541 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 MCOLN1Q9GZU1 580 aa2.56□□□□□ -2
ZNF260-203ENST00000588993 BRPF1P55201 1214 aaPredicted RBP2.55□□□□□ -2
ZNF260-203ENST00000588993 LDHDQ86WU2 507 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 CFHR5Q9BXR6 569 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 IGSF1Q8N6C5 1336 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 SH3TC1Q8TE82 1336 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 PBX2P40425 430 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 FXR1P51114 621 aaKnown RBP eCLIP2.55□□□□□ -2
ZNF260-203ENST00000588993 EVA1CP58658 441 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 DDB1Q16531 1140 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 ORAI2Q96SN7 254 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 FAM43BQ6ZT52 329 aaPredicted RBP2.55□□□□□ -2
ZNF260-203ENST00000588993 KRTAP4-8Q9BYQ9 185 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 PRDM11Q9NQV5 511 aa2.55□□□□□ -2
ZNF260-203ENST00000588993 KIF7Q2M1P5 1343 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 PASKQ96RG2 1323 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 DDX60LQ5H9U9 1706 aaKnown RBP2.54□□□□□ -2
ZNF260-203ENST00000588993 DPY19L2Q6NUT2 758 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 P2RX7Q99572 595 aaKnown RBP2.54□□□□□ -2
ZNF260-203ENST00000588993 COL3A1P02461 1466 aaPredicted RBP2.54□□□□□ -2
ZNF260-203ENST00000588993 ACEP12821 1306 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 GLTPD2A6NH11 291 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 METP08581 1390 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 PNPLA7Q6ZV29 1317 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 NFAT5O94916 1531 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 DEFB115Q30KQ5 88 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 STXBP5LQ9Y2K9 1186 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 ITGB4P16144 1822 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 SLX4Q8IY92 1834 aa2.54□□□□□ -2
ZNF260-203ENST00000588993 WDR33Q9C0J8 1336 aaKnown RBP2.54□□□□□ -2
ZNF260-203ENST00000588993 TJP1Q07157 1748 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 CTU1Q7Z7A3 348 aaKnown RBP2.53□□□□□ -2
ZNF260-203ENST00000588993 HS3ST6Q96QI5 342 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 POLR3AO14802 1390 aaPredicted RBP2.53□□□□□ -2
ZNF260-203ENST00000588993 COL4A6Q14031 1691 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 LTBP3Q9NS15 1303 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 TMEM265A0A087WTH1 108 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 PRR33A8MZF0 331 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 DGKZQ13574 1117 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 SOGA3Q5TF21 947 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 NECTIN2Q92692 538 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 CCDC87Q9NVE4 849 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 ROBO2Q9HCK4 1378 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 ROCK1Q13464 1354 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 PALLDQ8WX93 1383 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 AKAP4Q5JQC9 854 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 NLGN2Q8NFZ4 835 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 DCAF5Q96JK2 942 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 NMRK2Q9NPI5 230 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 ARAP2Q8WZ64 1704 aa2.53□□□□□ -2
ZNF260-203ENST00000588993 BTAF1O14981 1849 aa2.53□□□□□ -2.01
ZNF260-203ENST00000588993 BMP8BP34820 402 aa2.53□□□□□ -2.01
ZNF260-203ENST00000588993 PNMA8AQ86V59 439 aaPredicted RBP2.53□□□□□ -2.01
ZNF260-203ENST00000588993 MPNDQ8N594 471 aa2.53□□□□□ -2.01
ZNF260-203ENST00000588993 WASHC2AQ641Q2 1341 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 LTN1O94822 1766 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 MMP14P50281 582 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 FOXO3O43524 673 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 PAK3O75914 559 aaPredicted RBP2.52□□□□□ -2.01
ZNF260-203ENST00000588993 SSFA2P28290 1259 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 VEGFBP49765 207 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 C9orf131Q5VYM1 1079 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.52□□□□□ -2.01
ZNF260-203ENST00000588993 CARD10Q9BWT7 1032 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 ATP1B4Q9UN42 357 aaPredicted RBP2.52□□□□□ -2.01
ZNF260-203ENST00000588993 RIC1Q4ADV7 1423 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 EXOC5O00471 708 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 LMNB1P20700 586 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 SMARCC1Q92922 1105 aaPredicted RBP2.52□□□□□ -2.01
ZNF260-203ENST00000588993 L3MBTL3Q96JM7 780 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms