RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 POTEBQ6S5H4 581 aa11.85□□□□□ -0.51
ATG4D-210ENST00000588972 PHTF2Q8N3S3 785 aa11.85□□□□□ -0.51
ATG4D-210ENST00000588972 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
ATG4D-210ENST00000588972 ZNF592Q92610 1267 aa11.85□□□□□ -0.51
ATG4D-210ENST00000588972 GPKOWQ92917 476 aaPredicted RBP eCLIP11.85□□□□□ -0.51
ATG4D-210ENST00000588972 SYCP2Q9BX26 1530 aa11.85□□□□□ -0.51
ATG4D-210ENST00000588972 CASKIN1Q8WXD9 1431 aa11.85□□□□□ -0.51
ATG4D-210ENST00000588972 PLXNC1O60486 1568 aa11.84□□□□□ -0.51
ATG4D-210ENST00000588972 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
ATG4D-210ENST00000588972 DXOO77932 396 aaKnown RBP11.84□□□□□ -0.51
ATG4D-210ENST00000588972 NCOA4Q13772 614 aa11.84□□□□□ -0.51
ATG4D-210ENST00000588972 TXNDC2Q86VQ3 553 aa11.84□□□□□ -0.51
ATG4D-210ENST00000588972 FAM160A2Q8N612 972 aaPredicted RBP11.84□□□□□ -0.51
ATG4D-210ENST00000588972 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
ATG4D-210ENST00000588972 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
ATG4D-210ENST00000588972 GOLGA8CPA6NN73 597 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 MCCD1P59942 119 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-210ENST00000588972 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 PTK7Q13308 1070 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 RNF135Q8IUD6 432 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 HS3ST6Q96QI5 342 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 NUDT12Q9BQG2 462 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 AMOTL2Q9Y2J4 779 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 PCDHB9Q9Y5E1 797 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
ATG4D-210ENST00000588972 INO80Q9ULG1 1556 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-210ENST00000588972 FYCO1Q9BQS8 1478 aa11.83□□□□□ -0.52
ATG4D-210ENST00000588972 ATP7AQ04656 1500 aa11.82□□□□□ -0.52
ATG4D-210ENST00000588972 RASA1P20936 1047 aa11.82□□□□□ -0.52
ATG4D-210ENST00000588972 MMP16P51512 607 aa11.82□□□□□ -0.52
ATG4D-210ENST00000588972 LARP1Q6PKG0 1096 aaKnown RBP11.82□□□□□ -0.52
ATG4D-210ENST00000588972 CCER1Q8TC90 406 aaPredicted RBP11.82□□□□□ -0.52
ATG4D-210ENST00000588972 SLAIN2Q9P270 581 aa11.82□□□□□ -0.52
ATG4D-210ENST00000588972 TCOF1Q13428 1488 aaKnown RBP11.82□□□□□ -0.52
ATG4D-210ENST00000588972 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
ATG4D-210ENST00000588972 ATP5J2-PTCD1G3V325 749 aa11.81□□□□□ -0.52
ATG4D-210ENST00000588972 SSFA2P28290 1259 aa11.81□□□□□ -0.52
ATG4D-210ENST00000588972 NBPF14Q5TI25 921 aa11.81□□□□□ -0.52
ATG4D-210ENST00000588972 PLPP7Q8NBV4 271 aa11.81□□□□□ -0.52
ATG4D-210ENST00000588972 CHIC2Q9UKJ5 165 aa11.81□□□□□ -0.52
ATG4D-210ENST00000588972 ZNF335Q9H4Z2 1342 aaPredicted RBP11.81□□□□□ -0.52
ATG4D-210ENST00000588972 LZTS3O60299 673 aaPredicted RBP11.8□□□□□ -0.52
ATG4D-210ENST00000588972 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
ATG4D-210ENST00000588972 SPSB2Q99619 263 aa11.8□□□□□ -0.52
ATG4D-210ENST00000588972 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
ATG4D-210ENST00000588972 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
ATG4D-210ENST00000588972 STAC3Q96MF2 364 aa11.79□□□□□ -0.52
ATG4D-210ENST00000588972 CDCA7Q9BWT1 371 aaPredicted RBP11.79□□□□□ -0.52
ATG4D-210ENST00000588972 PRDM9Q9NQV7 894 aa11.79□□□□□ -0.52
ATG4D-210ENST00000588972 PTPRKQ15262 1439 aa11.78□□□□□ -0.52
ATG4D-210ENST00000588972 A2MP01023 1474 aa11.78□□□□□ -0.52
ATG4D-210ENST00000588972 GPATCH8Q9UKJ3 1502 aaKnown RBP11.78□□□□□ -0.52
ATG4D-210ENST00000588972 E9PSI1 815 aa11.78□□□□□ -0.52
ATG4D-210ENST00000588972 UBAP1LF5GYI3 381 aa11.78□□□□□ -0.52
ATG4D-210ENST00000588972 ADAM32Q8TC27 787 aa11.78□□□□□ -0.52
ATG4D-210ENST00000588972 CLP1Q92989 425 aaKnown RBP11.78□□□□□ -0.52
ATG4D-210ENST00000588972 WNT2BQ93097 391 aa11.78□□□□□ -0.52
ATG4D-210ENST00000588972 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
ATG4D-210ENST00000588972 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.52
ATG4D-210ENST00000588972 MAP7D1Q3KQU3 841 aa11.77□□□□□ -0.53
ATG4D-210ENST00000588972 TRAF7Q6Q0C0 670 aa11.77□□□□□ -0.53
ATG4D-210ENST00000588972 ANKMY2Q8IV38 441 aa11.77□□□□□ -0.53
ATG4D-210ENST00000588972 ARHGAP9Q9BRR9 750 aa11.77□□□□□ -0.53
ATG4D-210ENST00000588972 ARID4AP29374 1257 aaPredicted RBP11.76□□□□□ -0.53
ATG4D-210ENST00000588972 EML3Q32P44 896 aa11.76□□□□□ -0.53
ATG4D-210ENST00000588972 POLR1AO95602 1720 aaPredicted RBP11.75□□□□□ -0.53
ATG4D-210ENST00000588972 WBP1LQ9NX94 342 aa11.75□□□□□ -0.53
ATG4D-210ENST00000588972 A2ML1A8K2U0 1454 aa11.75□□□□□ -0.53
ATG4D-210ENST00000588972 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
ATG4D-210ENST00000588972 COPS2P61201 443 aa11.74□□□□□ -0.53
ATG4D-210ENST00000588972 DPYDQ12882 1025 aa11.74□□□□□ -0.53
ATG4D-210ENST00000588972 TSGA10IPQ3SY00 556 aa11.74□□□□□ -0.53
ATG4D-210ENST00000588972 SH3BP5LQ7L8J4 393 aa11.74□□□□□ -0.53
ATG4D-210ENST00000588972 OGFOD1Q8N543 542 aa11.74□□□□□ -0.53
ATG4D-210ENST00000588972 VPS8Q8N3P4 1428 aa11.74□□□□□ -0.53
ATG4D-210ENST00000588972 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
ATG4D-210ENST00000588972 CPS1P31327 1500 aa11.73□□□□□ -0.53
ATG4D-210ENST00000588972 HNRNPMP52272 730 aaKnown RBP eCLIP11.73□□□□□ -0.53
ATG4D-210ENST00000588972 CLDN10P78369 228 aa11.73□□□□□ -0.53
ATG4D-210ENST00000588972 NEURL4Q96JN8 1562 aa11.72□□□□□ -0.53
ATG4D-210ENST00000588972 FAM135AQ9P2D6 1515 aa11.72□□□□□ -0.53
ATG4D-210ENST00000588972 ATP2B4P23634 1241 aa11.72□□□□□ -0.53
ATG4D-210ENST00000588972 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
ATG4D-210ENST00000588972 ZBTB33Q86T24 672 aa11.72□□□□□ -0.53
ATG4D-210ENST00000588972 TRIM50Q86XT4 487 aa11.72□□□□□ -0.53
ATG4D-210ENST00000588972 ZNF594Q96JF6 807 aaPredicted RBP11.72□□□□□ -0.53
ATG4D-210ENST00000588972 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
ATG4D-210ENST00000588972 CFDP1Q9UEE9 299 aaPredicted RBP11.72□□□□□ -0.53
ATG4D-210ENST00000588972 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.53
ATG4D-210ENST00000588972 SWI5Q1ZZU3 235 aa11.71□□□□□ -0.53
ATG4D-210ENST00000588972 PTCRAQ6ISU1 281 aaPredicted RBP11.71□□□□□ -0.53
ATG4D-210ENST00000588972 GGT6Q6P531 493 aa11.71□□□□□ -0.53
ATG4D-210ENST00000588972 DNAAF2Q9NVR5 837 aaKnown RBP11.71□□□□□ -0.53
ATG4D-210ENST00000588972 NOD1Q9Y239 953 aa11.71□□□□□ -0.53
ATG4D-210ENST00000588972 LHX8Q68G74 356 aa11.7□□□□□ -0.54
ATG4D-210ENST00000588972 DZIP3Q86Y13 1208 aaKnown RBP11.7□□□□□ -0.54
ATG4D-210ENST00000588972 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
ATG4D-210ENST00000588972 TIAM1Q13009 1591 aa11.7□□□□□ -0.54
ATG4D-210ENST00000588972 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
ATG4D-210ENST00000588972 SOWAHDA6NJG2 315 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms