RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ITGB4P16144 1822 aa22.09■■□□□ 1.13
SCAMP4-211ENST00000588907 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
SCAMP4-211ENST00000588907 THUMPD2Q9BTF0 503 aaKnown RBP22.09■■□□□ 1.13
SCAMP4-211ENST00000588907 SBF2Q86WG5 1849 aa22.06■■□□□ 1.12
SCAMP4-211ENST00000588907 BTBD11A6QL63 1104 aa22.06■■□□□ 1.12
SCAMP4-211ENST00000588907 ZNF853P0CG23 659 aa22.06■■□□□ 1.12
SCAMP4-211ENST00000588907 NFATC2IPQ8NCF5 419 aa22.06■■□□□ 1.12
SCAMP4-211ENST00000588907 KAT6BQ8WYB5 2073 aa22.06■■□□□ 1.12
SCAMP4-211ENST00000588907 CHL1O00533 1208 aa22.05■■□□□ 1.12
SCAMP4-211ENST00000588907 PRIM1P49642 420 aaKnown RBP22.05■■□□□ 1.12
SCAMP4-211ENST00000588907 SYTL4Q96C24 671 aaPredicted RBP22.05■■□□□ 1.12
SCAMP4-211ENST00000588907 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
SCAMP4-211ENST00000588907 KDM3BQ7LBC6 1761 aa22.04■■□□□ 1.12
SCAMP4-211ENST00000588907 PAPPAQ13219 1627 aa22.03■■□□□ 1.12
SCAMP4-211ENST00000588907 SLFN5Q08AF3 891 aa22.03■■□□□ 1.12
SCAMP4-211ENST00000588907 TTC5Q8N0Z6 440 aa22.03■■□□□ 1.12
SCAMP4-211ENST00000588907 BCL11BQ9C0K0 894 aaPredicted RBP22.03■■□□□ 1.12
SCAMP4-211ENST00000588907 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
SCAMP4-211ENST00000588907 PIGBQ92521 554 aa22.02■■□□□ 1.12
SCAMP4-211ENST00000588907 SMARCC1Q92922 1105 aaPredicted RBP22.02■■□□□ 1.12
SCAMP4-211ENST00000588907 ACSBG1Q96GR2 724 aa22.02■■□□□ 1.12
SCAMP4-211ENST00000588907 ZNF790Q6PG37 636 aa22.01■■□□□ 1.11
SCAMP4-211ENST00000588907 FANCIQ9NVI1 1328 aa22.01■■□□□ 1.11
SCAMP4-211ENST00000588907 EP400Q96L91 3159 aa22.01■■□□□ 1.11
SCAMP4-211ENST00000588907 FAM182BQ5T319 152 aa22■■□□□ 1.11
SCAMP4-211ENST00000588907 TRMT2AQ8IZ69 625 aaKnown RBP22■■□□□ 1.11
SCAMP4-211ENST00000588907 MBIPQ9NS73 344 aa22■■□□□ 1.11
SCAMP4-211ENST00000588907 SOS1Q07889 1333 aaPredicted RBP22■■□□□ 1.11
SCAMP4-211ENST00000588907 BTAF1O14981 1849 aa21.99■■□□□ 1.11
SCAMP4-211ENST00000588907 UBR2Q8IWV8 1755 aa21.98■■□□□ 1.11
SCAMP4-211ENST00000588907 CHMP4AQ9BY43 222 aa21.98■■□□□ 1.11
SCAMP4-211ENST00000588907 HMGB2P26583 209 aaKnown RBP21.97■■□□□ 1.11
SCAMP4-211ENST00000588907 DUSP27Q5VZP5 1158 aa21.97■■□□□ 1.11
SCAMP4-211ENST00000588907 CDCA7LQ96GN5 454 aa21.97■■□□□ 1.11
SCAMP4-211ENST00000588907 KCNQ2O43526 872 aa21.96■■□□□ 1.11
SCAMP4-211ENST00000588907 CT47B1P0C2W7 299 aaPredicted RBP21.96■■□□□ 1.11
SCAMP4-211ENST00000588907 FMNL2Q96PY5 1086 aa21.96■■□□□ 1.11
SCAMP4-211ENST00000588907 SPINK5Q9NQ38 1064 aaPredicted RBP21.96■■□□□ 1.11
SCAMP4-211ENST00000588907 HOXB7P09629 217 aa21.95■■□□□ 1.1
SCAMP4-211ENST00000588907 TSR2Q969E8 191 aaKnown RBP21.95■■□□□ 1.1
SCAMP4-211ENST00000588907 ATG3Q9NT62 314 aa21.95■■□□□ 1.1
SCAMP4-211ENST00000588907 MIS18AQ9NYP9 233 aa21.95■■□□□ 1.1
SCAMP4-211ENST00000588907 TRIM37O94972 964 aa21.94■■□□□ 1.1
SCAMP4-211ENST00000588907 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
SCAMP4-211ENST00000588907 PALLDQ8WX93 1383 aa21.94■■□□□ 1.1
SCAMP4-211ENST00000588907 KCPQ6ZWJ8 1503 aa21.94■■□□□ 1.1
SCAMP4-211ENST00000588907 EIF4A1P60842 406 aaKnown RBP21.93■■□□□ 1.1
SCAMP4-211ENST00000588907 SLC39A6Q13433 755 aa21.93■■□□□ 1.1
SCAMP4-211ENST00000588907 ZNF831Q5JPB2 1677 aa21.93■■□□□ 1.1
SCAMP4-211ENST00000588907 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
SCAMP4-211ENST00000588907 RGPD3A6NKT7 1758 aaPredicted RBP21.92■■□□□ 1.1
SCAMP4-211ENST00000588907 RGPD4Q7Z3J3 1758 aa21.92■■□□□ 1.1
SCAMP4-211ENST00000588907 HEG1Q9ULI3 1381 aa21.92■■□□□ 1.1
SCAMP4-211ENST00000588907 CCDC125Q86Z20 511 aa21.92■■□□□ 1.1
SCAMP4-211ENST00000588907 ZNF428Q96B54 188 aa21.92■■□□□ 1.1
SCAMP4-211ENST00000588907 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
SCAMP4-211ENST00000588907 CICQ96RK0 1608 aaPredicted RBP21.91■■□□□ 1.1
SCAMP4-211ENST00000588907 TEX13AQ9BXU3 409 aaPredicted RBP21.91■■□□□ 1.1
SCAMP4-211ENST00000588907 SNRPA1P09661 255 aaKnown RBP21.9■■□□□ 1.1
SCAMP4-211ENST00000588907 SF3B2Q13435 895 aaKnown RBP21.9■■□□□ 1.1
SCAMP4-211ENST00000588907 ZNF496Q96IT1 587 aaPredicted RBP21.9■■□□□ 1.1
SCAMP4-211ENST00000588907 PLSCR1O15162 318 aa21.89■■□□□ 1.09
SCAMP4-211ENST00000588907 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
SCAMP4-211ENST00000588907 LY75O60449 1722 aa21.89■■□□□ 1.09
SCAMP4-211ENST00000588907 KCNQ3O43525 872 aa21.88■■□□□ 1.09
SCAMP4-211ENST00000588907 PTCD1O75127 700 aaKnown RBP21.88■■□□□ 1.09
SCAMP4-211ENST00000588907 GIGYF1O75420 1035 aaPredicted RBP21.88■■□□□ 1.09
SCAMP4-211ENST00000588907 TWISTNBQ3B726 338 aaPredicted RBP21.88■■□□□ 1.09
SCAMP4-211ENST00000588907 LAMB4A4D0S4 1761 aa21.88■■□□□ 1.09
SCAMP4-211ENST00000588907 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
SCAMP4-211ENST00000588907 SIK1P57059 783 aa21.87■■□□□ 1.09
SCAMP4-211ENST00000588907 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
SCAMP4-211ENST00000588907 APBA3O96018 575 aa21.86■■□□□ 1.09
SCAMP4-211ENST00000588907 CENPBP07199 599 aaPredicted RBP21.86■■□□□ 1.09
SCAMP4-211ENST00000588907 SLC27A3Q5K4L6 730 aa21.86■■□□□ 1.09
SCAMP4-211ENST00000588907 PTF1AQ7RTS3 328 aa21.85■■□□□ 1.09
SCAMP4-211ENST00000588907 C8orf58Q8NAV2 365 aa21.85■■□□□ 1.09
SCAMP4-211ENST00000588907 STARD3NLO95772 234 aa21.84■■□□□ 1.09
SCAMP4-211ENST00000588907 ATP6V1AP38606 617 aa21.83■■□□□ 1.09
SCAMP4-211ENST00000588907 BAG6P46379 1132 aa21.83■■□□□ 1.09
SCAMP4-211ENST00000588907 ERBB4Q15303 1308 aa21.82■■□□□ 1.08
SCAMP4-211ENST00000588907 C5P01031 1676 aa21.82■■□□□ 1.08
SCAMP4-211ENST00000588907 VAMP4O75379 141 aa21.82■■□□□ 1.08
SCAMP4-211ENST00000588907 HDGFL1Q5TGJ6 251 aa21.82■■□□□ 1.08
SCAMP4-211ENST00000588907 CCDC30Q5VVM6 783 aa21.82■■□□□ 1.08
SCAMP4-211ENST00000588907 CCNL1Q9UK58 526 aaPredicted RBP21.82■■□□□ 1.08
SCAMP4-211ENST00000588907 TJP1Q07157 1748 aa21.82■■□□□ 1.08
SCAMP4-211ENST00000588907 KRT24Q2M2I5 525 aa21.81■■□□□ 1.08
SCAMP4-211ENST00000588907 TSPYL6Q8N831 410 aa21.81■■□□□ 1.08
SCAMP4-211ENST00000588907 CACNA1FO60840 1977 aa21.8■■□□□ 1.08
SCAMP4-211ENST00000588907 ELL2O00472 640 aaPredicted RBP21.8■■□□□ 1.08
SCAMP4-211ENST00000588907 ALDH1L2Q3SY69 923 aa21.8■■□□□ 1.08
SCAMP4-211ENST00000588907 STK31Q9BXU1 1019 aa21.8■■□□□ 1.08
SCAMP4-211ENST00000588907 COL5A3P25940 1745 aaPredicted RBP21.8■■□□□ 1.08
SCAMP4-211ENST00000588907 DNAJC10Q8IXB1 793 aa21.78■■□□□ 1.08
SCAMP4-211ENST00000588907 SLC4A9Q96Q91 983 aa21.78■■□□□ 1.08
SCAMP4-211ENST00000588907 TXNRD1Q16881 649 aa21.77■■□□□ 1.08
SCAMP4-211ENST00000588907 DBF4Q9UBU7 674 aaPredicted RBP21.77■■□□□ 1.08
SCAMP4-211ENST00000588907 TAF1LQ8IZX4 1826 aa21.76■■□□□ 1.07
SCAMP4-211ENST00000588907 EIF2S2P20042 333 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms