RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
NPC1-207ENST00000588867 MARCH10Q8NA82 808 aaPredicted RBP18.75■□□□□ 0.59
NPC1-207ENST00000588867 KAT6BQ8WYB5 2073 aa18.74■□□□□ 0.59
NPC1-207ENST00000588867 ERVV-2B6SEH9 535 aa18.74■□□□□ 0.59
NPC1-207ENST00000588867 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
NPC1-207ENST00000588867 KRT24Q2M2I5 525 aa18.73■□□□□ 0.59
NPC1-207ENST00000588867 TSPYL6Q8N831 410 aa18.73■□□□□ 0.59
NPC1-207ENST00000588867 KCNQ3O43525 872 aa18.73■□□□□ 0.59
NPC1-207ENST00000588867 ONECUT3O60422 494 aaPredicted RBP18.73■□□□□ 0.59
NPC1-207ENST00000588867 SEPT12Q8IYM1 358 aa18.73■□□□□ 0.59
NPC1-207ENST00000588867 SLC39A6Q13433 755 aa18.72■□□□□ 0.59
NPC1-207ENST00000588867 TWISTNBQ3B726 338 aaPredicted RBP18.72■□□□□ 0.59
NPC1-207ENST00000588867 SIPA1L3O60292 1781 aaPredicted RBP18.71■□□□□ 0.59
NPC1-207ENST00000588867 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
NPC1-207ENST00000588867 SYTL4Q96C24 671 aaPredicted RBP18.71■□□□□ 0.59
NPC1-207ENST00000588867 THSD7AQ9UPZ6 1657 aa18.71■□□□□ 0.59
NPC1-207ENST00000588867 CT47B1P0C2W7 299 aaPredicted RBP18.71■□□□□ 0.59
NPC1-207ENST00000588867 TMOD3Q9NYL9 352 aa18.71■□□□□ 0.59
NPC1-207ENST00000588867 VAMP4O75379 141 aa18.7■□□□□ 0.58
NPC1-207ENST00000588867 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
NPC1-207ENST00000588867 ILDR1Q86SU0 546 aaPredicted RBP18.69■□□□□ 0.58
NPC1-207ENST00000588867 ACSBG1Q96GR2 724 aa18.69■□□□□ 0.58
NPC1-207ENST00000588867 MRC1P22897 1456 aa18.69■□□□□ 0.58
NPC1-207ENST00000588867 EIF4A1P60842 406 aaKnown RBP18.69■□□□□ 0.58
NPC1-207ENST00000588867 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
NPC1-207ENST00000588867 TOGARAM1Q9Y4F4 1720 aa18.68■□□□□ 0.58
NPC1-207ENST00000588867 KDM3BQ7LBC6 1761 aa18.68■□□□□ 0.58
NPC1-207ENST00000588867 BCAR3O75815 825 aa18.68■□□□□ 0.58
NPC1-207ENST00000588867 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
NPC1-207ENST00000588867 RARSP54136 660 aaKnown RBP18.68■□□□□ 0.58
NPC1-207ENST00000588867 FAM182BQ5T319 152 aa18.68■□□□□ 0.58
NPC1-207ENST00000588867 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
NPC1-207ENST00000588867 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
NPC1-207ENST00000588867 RXRBP28702 533 aa18.67■□□□□ 0.58
NPC1-207ENST00000588867 PIGBQ92521 554 aa18.67■□□□□ 0.58
NPC1-207ENST00000588867 ITGB4P16144 1822 aa18.66■□□□□ 0.58
NPC1-207ENST00000588867 TCERG1O14776 1098 aaKnown RBP18.66■□□□□ 0.58
NPC1-207ENST00000588867 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
NPC1-207ENST00000588867 DOT1LQ8TEK3 1739 aa18.65■□□□□ 0.58
NPC1-207ENST00000588867 POTEAQ6S8J7 498 aa18.64■□□□□ 0.58
NPC1-207ENST00000588867 ZNF428Q96B54 188 aa18.64■□□□□ 0.58
NPC1-207ENST00000588867 SMC4Q9NTJ3 1288 aa18.64■□□□□ 0.58
NPC1-207ENST00000588867 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
NPC1-207ENST00000588867 PLIN1O60240 522 aa18.63■□□□□ 0.57
NPC1-207ENST00000588867 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
NPC1-207ENST00000588867 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
NPC1-207ENST00000588867 BCL9O00512 1426 aa18.62■□□□□ 0.57
NPC1-207ENST00000588867 KCNQ2O43526 872 aa18.62■□□□□ 0.57
NPC1-207ENST00000588867 RRP1P56182 461 aaKnown RBP18.62■□□□□ 0.57
NPC1-207ENST00000588867 KRT27Q7Z3Y8 459 aa18.62■□□□□ 0.57
NPC1-207ENST00000588867 FRAT1Q92837 279 aaPredicted RBP18.62■□□□□ 0.57
NPC1-207ENST00000588867 FMNL2Q96PY5 1086 aa18.62■□□□□ 0.57
NPC1-207ENST00000588867 PTCD1O75127 700 aaKnown RBP18.62■□□□□ 0.57
NPC1-207ENST00000588867 GIGYF1O75420 1035 aaPredicted RBP18.62■□□□□ 0.57
NPC1-207ENST00000588867 EIF2S2P20042 333 aaKnown RBP18.62■□□□□ 0.57
NPC1-207ENST00000588867 IRX6P78412 446 aaPredicted RBP18.62■□□□□ 0.57
NPC1-207ENST00000588867 ALDH1L2Q3SY69 923 aa18.62■□□□□ 0.57
NPC1-207ENST00000588867 NEFLP07196 543 aa18.61■□□□□ 0.57
NPC1-207ENST00000588867 CANXP27824 592 aaKnown RBP18.61■□□□□ 0.57
NPC1-207ENST00000588867 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
NPC1-207ENST00000588867 RNF123Q5XPI4 1314 aa18.61■□□□□ 0.57
NPC1-207ENST00000588867 PRAMEF22A3QJZ6 481 aa18.61■□□□□ 0.57
NPC1-207ENST00000588867 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.61■□□□□ 0.57
NPC1-207ENST00000588867 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
NPC1-207ENST00000588867 SOS1Q07889 1333 aaPredicted RBP18.6■□□□□ 0.57
NPC1-207ENST00000588867 HDGFL1Q5TGJ6 251 aa18.6■□□□□ 0.57
NPC1-207ENST00000588867 HOXB7P09629 217 aa18.59■□□□□ 0.57
NPC1-207ENST00000588867 CCDC30Q5VVM6 783 aa18.59■□□□□ 0.57
NPC1-207ENST00000588867 HEG1Q9ULI3 1381 aa18.59■□□□□ 0.57
NPC1-207ENST00000588867 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
NPC1-207ENST00000588867 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
NPC1-207ENST00000588867 MRPL50Q8N5N7 158 aaKnown RBP18.58■□□□□ 0.56
NPC1-207ENST00000588867 STK31Q9BXU1 1019 aa18.58■□□□□ 0.56
NPC1-207ENST00000588867 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
NPC1-207ENST00000588867 NOB1Q9ULX3 412 aaKnown RBP18.57■□□□□ 0.56
NPC1-207ENST00000588867 PAPPAQ13219 1627 aa18.57■□□□□ 0.56
NPC1-207ENST00000588867 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
NPC1-207ENST00000588867 FAM196AQ6ZSG2 479 aa18.56■□□□□ 0.56
NPC1-207ENST00000588867 PTF1AQ7RTS3 328 aa18.56■□□□□ 0.56
NPC1-207ENST00000588867 FKBP8Q14318 412 aa18.56■□□□□ 0.56
NPC1-207ENST00000588867 GTF3C3Q9Y5Q9 886 aa18.56■□□□□ 0.56
NPC1-207ENST00000588867 USP16Q9Y5T5 823 aa18.56■□□□□ 0.56
NPC1-207ENST00000588867 UBR2Q8IWV8 1755 aa18.55■□□□□ 0.56
NPC1-207ENST00000588867 KCPQ6ZWJ8 1503 aa18.55■□□□□ 0.56
NPC1-207ENST00000588867 KIF16BQ96L93 1317 aa18.55■□□□□ 0.56
NPC1-207ENST00000588867 ZKSCAN2Q63HK3 967 aa18.54■□□□□ 0.56
NPC1-207ENST00000588867 RGS12O14924 1447 aa18.54■□□□□ 0.56
NPC1-207ENST00000588867 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
NPC1-207ENST00000588867 BRPF1P55201 1214 aaPredicted RBP18.54■□□□□ 0.56
NPC1-207ENST00000588867 CHPF2Q9P2E5 772 aa18.54■□□□□ 0.56
NPC1-207ENST00000588867 C5P01031 1676 aa18.53■□□□□ 0.56
NPC1-207ENST00000588867 C20orf194Q5TEA3 1177 aa18.53■□□□□ 0.56
NPC1-207ENST00000588867 SMARCC1Q92922 1105 aaPredicted RBP18.53■□□□□ 0.56
NPC1-207ENST00000588867 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.56
NPC1-207ENST00000588867 SBF2Q86WG5 1849 aa18.52■□□□□ 0.56
NPC1-207ENST00000588867 ANXA1P04083 346 aa18.52■□□□□ 0.55
NPC1-207ENST00000588867 DBF4Q9UBU7 674 aaPredicted RBP18.52■□□□□ 0.55
NPC1-207ENST00000588867 TNNQ9UQP3 1299 aa18.52■□□□□ 0.55
NPC1-207ENST00000588867 G2E3Q7L622 706 aa18.51■□□□□ 0.55
NPC1-207ENST00000588867 VSIG10Q8N0Z9 540 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms