RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 CHL1O00533 1208 aa29.4■■■□□ 2.3
ACTN4-210ENST00000588618 MARCH10Q8NA82 808 aaPredicted RBP29.4■■■□□ 2.3
ACTN4-210ENST00000588618 CABP4P57796 275 aa29.39■■■□□ 2.3
ACTN4-210ENST00000588618 TAF7Q15545 349 aaPredicted RBP29.39■■■□□ 2.3
ACTN4-210ENST00000588618 ITGB4P16144 1822 aa29.39■■■□□ 2.29
ACTN4-210ENST00000588618 BRWD3Q6RI45 1802 aa29.38■■■□□ 2.29
ACTN4-210ENST00000588618 DOT1LQ8TEK3 1739 aa29.38■■■□□ 2.29
ACTN4-210ENST00000588618 ERVV-2B6SEH9 535 aa29.37■■■□□ 2.29
ACTN4-210ENST00000588618 SLC52A2Q9HAB3 445 aa29.37■■■□□ 2.29
ACTN4-210ENST00000588618 KAT6BQ8WYB5 2073 aa29.37■■■□□ 2.29
ACTN4-210ENST00000588618 TSPYL4Q9UJ04 414 aa29.37■■■□□ 2.29
ACTN4-210ENST00000588618 EP400Q96L91 3159 aa29.36■■■□□ 2.29
ACTN4-210ENST00000588618 POTEAQ6S8J7 498 aa29.35■■■□□ 2.29
ACTN4-210ENST00000588618 BTBD11A6QL63 1104 aa29.34■■■□□ 2.29
ACTN4-210ENST00000588618 NFATC2IPQ8NCF5 419 aa29.34■■■□□ 2.29
ACTN4-210ENST00000588618 BABAM1Q9NWV8 329 aa29.34■■■□□ 2.29
ACTN4-210ENST00000588618 EXOSC9Q06265 439 aaKnown RBP29.33■■■□□ 2.29
ACTN4-210ENST00000588618 TMOD3Q9NYL9 352 aa29.32■■■□□ 2.28
ACTN4-210ENST00000588618 SYTL4Q96C24 671 aaPredicted RBP29.31■■■□□ 2.28
ACTN4-210ENST00000588618 KCNQ3O43525 872 aa29.3■■■□□ 2.28
ACTN4-210ENST00000588618 KRT24Q2M2I5 525 aa29.3■■■□□ 2.28
ACTN4-210ENST00000588618 KRT27Q7Z3Y8 459 aa29.3■■■□□ 2.28
ACTN4-210ENST00000588618 PAPPAQ13219 1627 aa29.29■■■□□ 2.28
ACTN4-210ENST00000588618 TSPYL6Q8N831 410 aa29.27■■■□□ 2.28
ACTN4-210ENST00000588618 C8orf58Q8NAV2 365 aa29.27■■■□□ 2.28
ACTN4-210ENST00000588618 ACSBG1Q96GR2 724 aa29.27■■■□□ 2.28
ACTN4-210ENST00000588618 FAM182BQ5T319 152 aa29.26■■■□□ 2.27
ACTN4-210ENST00000588618 TTC5Q8N0Z6 440 aa29.26■■■□□ 2.27
ACTN4-210ENST00000588618 PRIM1P49642 420 aaKnown RBP29.25■■■□□ 2.27
ACTN4-210ENST00000588618 SLC39A6Q13433 755 aa29.25■■■□□ 2.27
ACTN4-210ENST00000588618 RGS12O14924 1447 aa29.24■■■□□ 2.27
ACTN4-210ENST00000588618 UBR2Q8IWV8 1755 aa29.24■■■□□ 2.27
ACTN4-210ENST00000588618 SBF2Q86WG5 1849 aa29.24■■■□□ 2.27
ACTN4-210ENST00000588618 BCL9O00512 1426 aa29.23■■■□□ 2.27
ACTN4-210ENST00000588618 ZNF790Q6PG37 636 aa29.23■■■□□ 2.27
ACTN4-210ENST00000588618 ELL2O00472 640 aaPredicted RBP29.22■■■□□ 2.27
ACTN4-210ENST00000588618 EIF4A1P60842 406 aaKnown RBP29.22■■■□□ 2.27
ACTN4-210ENST00000588618 PIGBQ92521 554 aa29.22■■■□□ 2.27
ACTN4-210ENST00000588618 FAM196AQ6ZSG2 479 aa29.21■■■□□ 2.27
ACTN4-210ENST00000588618 RCAN3Q9UKA8 241 aa29.2■■■□□ 2.27
ACTN4-210ENST00000588618 NHSQ6T4R5 1651 aa29.19■■■□□ 2.26
ACTN4-210ENST00000588618 VAMP4O75379 141 aa29.19■■■□□ 2.26
ACTN4-210ENST00000588618 HEG1Q9ULI3 1381 aa29.18■■■□□ 2.26
ACTN4-210ENST00000588618 C5P01031 1676 aa29.18■■■□□ 2.26
ACTN4-210ENST00000588618 KCNQ2O43526 872 aa29.18■■■□□ 2.26
ACTN4-210ENST00000588618 CT47B1P0C2W7 299 aaPredicted RBP29.18■■■□□ 2.26
ACTN4-210ENST00000588618 TWISTNBQ3B726 338 aaPredicted RBP29.18■■■□□ 2.26
ACTN4-210ENST00000588618 KCPQ6ZWJ8 1503 aa29.18■■■□□ 2.26
ACTN4-210ENST00000588618 PTF1AQ7RTS3 328 aa29.15■■■□□ 2.26
ACTN4-210ENST00000588618 FMNL2Q96PY5 1086 aa29.15■■■□□ 2.26
ACTN4-210ENST00000588618 ASAP1Q9ULH1 1129 aa29.15■■■□□ 2.26
ACTN4-210ENST00000588618 RARSP54136 660 aaKnown RBP29.14■■■□□ 2.26
ACTN4-210ENST00000588618 ZNF496Q96IT1 587 aaPredicted RBP29.14■■■□□ 2.26
ACTN4-210ENST00000588618 SUPT16HQ9Y5B9 1047 aaKnown RBP29.14■■■□□ 2.26
ACTN4-210ENST00000588618 ATG3Q9NT62 314 aa29.14■■■□□ 2.25
ACTN4-210ENST00000588618 BTAF1O14981 1849 aa29.13■■■□□ 2.25
ACTN4-210ENST00000588618 PRAMEF22A3QJZ6 481 aa29.12■■■□□ 2.25
ACTN4-210ENST00000588618 SOS1Q07889 1333 aaPredicted RBP29.12■■■□□ 2.25
ACTN4-210ENST00000588618 BCAR3O75815 825 aa29.11■■■□□ 2.25
ACTN4-210ENST00000588618 PTCD1O75127 700 aaKnown RBP29.11■■■□□ 2.25
ACTN4-210ENST00000588618 ZNF428Q96B54 188 aa29.11■■■□□ 2.25
ACTN4-210ENST00000588618 BCL2L13Q9BXK5 485 aa29.11■■■□□ 2.25
ACTN4-210ENST00000588618 GIGYF1O75420 1035 aaPredicted RBP29.1■■■□□ 2.25
ACTN4-210ENST00000588618 SSH1Q8WYL5 1049 aa29.1■■■□□ 2.25
ACTN4-210ENST00000588618 SMARCC1Q92922 1105 aaPredicted RBP29.1■■■□□ 2.25
ACTN4-210ENST00000588618 CHMP4AQ9BY43 222 aa29.1■■■□□ 2.25
ACTN4-210ENST00000588618 HOXB7P09629 217 aa29.08■■■□□ 2.25
ACTN4-210ENST00000588618 BCL11BQ9C0K0 894 aaPredicted RBP29.08■■■□□ 2.25
ACTN4-210ENST00000588618 LAMB4A4D0S4 1761 aa29.08■■■□□ 2.25
ACTN4-210ENST00000588618 TCERG1O14776 1098 aaKnown RBP29.08■■■□□ 2.25
ACTN4-210ENST00000588618 RBM42Q9BTD8 480 aaKnown RBP29.08■■■□□ 2.25
ACTN4-210ENST00000588618 RNF123Q5XPI4 1314 aa29.08■■■□□ 2.25
ACTN4-210ENST00000588618 SNRPA1P09661 255 aaKnown RBP29.07■■■□□ 2.24
ACTN4-210ENST00000588618 TRIM37O94972 964 aa29.06■■■□□ 2.24
ACTN4-210ENST00000588618 PALLDQ8WX93 1383 aa29.05■■■□□ 2.24
ACTN4-210ENST00000588618 EIF2S2P20042 333 aaKnown RBP29.04■■■□□ 2.24
ACTN4-210ENST00000588618 ALDH1L2Q3SY69 923 aa29.04■■■□□ 2.24
ACTN4-210ENST00000588618 HDGFL1Q5TGJ6 251 aa29.04■■■□□ 2.24
ACTN4-210ENST00000588618 NECTIN2Q92692 538 aa29.04■■■□□ 2.24
ACTN4-210ENST00000588618 SLC4A9Q96Q91 983 aa29.04■■■□□ 2.24
ACTN4-210ENST00000588618 TJP1Q07157 1748 aa29.03■■■□□ 2.24
ACTN4-210ENST00000588618 CACNA1FO60840 1977 aa29.03■■■□□ 2.24
ACTN4-210ENST00000588618 CCDC30Q5VVM6 783 aa29.03■■■□□ 2.24
ACTN4-210ENST00000588618 VSIG10Q8N0Z9 540 aa29.03■■■□□ 2.24
ACTN4-210ENST00000588618 SMC4Q9NTJ3 1288 aa29.03■■■□□ 2.24
ACTN4-210ENST00000588618 STK31Q9BXU1 1019 aa29.02■■■□□ 2.24
ACTN4-210ENST00000588618 PLIN1O60240 522 aa29.01■■■□□ 2.23
ACTN4-210ENST00000588618 RRP1P56182 461 aaKnown RBP29.01■■■□□ 2.23
ACTN4-210ENST00000588618 MRPL50Q8N5N7 158 aaKnown RBP29.01■■■□□ 2.23
ACTN4-210ENST00000588618 TEX13AQ9BXU3 409 aaPredicted RBP29■■■□□ 2.23
ACTN4-210ENST00000588618 USP16Q9Y5T5 823 aa29■■■□□ 2.23
ACTN4-210ENST00000588618 LY75O60449 1722 aa28.98■■■□□ 2.23
ACTN4-210ENST00000588618 LOC102724428A0A0B4J2F2 783 aa28.98■■■□□ 2.23
ACTN4-210ENST00000588618 SIK1P57059 783 aa28.98■■■□□ 2.23
ACTN4-210ENST00000588618 CICQ96RK0 1608 aaPredicted RBP28.98■■■□□ 2.23
ACTN4-210ENST00000588618 ATP6V1AP38606 617 aa28.97■■■□□ 2.23
ACTN4-210ENST00000588618 BRPF1P55201 1214 aaPredicted RBP28.97■■■□□ 2.23
ACTN4-210ENST00000588618 CANXP27824 592 aaKnown RBP28.96■■■□□ 2.23
ACTN4-210ENST00000588618 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.96■■■□□ 2.23
ACTN4-210ENST00000588618 ZNF831Q5JPB2 1677 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms