RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 TFCP2L1Q9NZI6 479 aa14.1□□□□□ -0.15
TPM4-209ENST00000588483 COL5A3P25940 1745 aaPredicted RBP14.1□□□□□ -0.15
TPM4-209ENST00000588483 ZBTB7AO95365 584 aa14.09□□□□□ -0.15
TPM4-209ENST00000588483 RSPH6AQ9H0K4 717 aa14.09□□□□□ -0.15
TPM4-209ENST00000588483 NUDCQ9Y266 331 aa14.09□□□□□ -0.15
TPM4-209ENST00000588483 U2SURPO15042 1029 aaKnown RBP14.08□□□□□ -0.16
TPM4-209ENST00000588483 CABP4P57796 275 aa14.08□□□□□ -0.16
TPM4-209ENST00000588483 RALBP1Q15311 655 aa14.08□□□□□ -0.16
TPM4-209ENST00000588483 FLAD1Q8NFF5 587 aa14.08□□□□□ -0.16
TPM4-209ENST00000588483 RNMTO43148 476 aaKnown RBP14.07□□□□□ -0.16
TPM4-209ENST00000588483 FCHSD2O94868 740 aa14.07□□□□□ -0.16
TPM4-209ENST00000588483 LINC00116Q8NCU8 138 aa14.07□□□□□ -0.16
TPM4-209ENST00000588483 GAS2L2Q8NHY3 880 aa14.07□□□□□ -0.16
TPM4-209ENST00000588483 SLC52A2Q9HAB3 445 aa14.07□□□□□ -0.16
TPM4-209ENST00000588483 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
TPM4-209ENST00000588483 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
TPM4-209ENST00000588483 ITPK1Q13572 414 aa14.06□□□□□ -0.16
TPM4-209ENST00000588483 NFATC2IPQ8NCF5 419 aa14.06□□□□□ -0.16
TPM4-209ENST00000588483 SLC4A9Q96Q91 983 aa14.06□□□□□ -0.16
TPM4-209ENST00000588483 LGR6Q9HBX8 967 aa14.06□□□□□ -0.16
TPM4-209ENST00000588483 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
TPM4-209ENST00000588483 UBR2Q8IWV8 1755 aa14.06□□□□□ -0.16
TPM4-209ENST00000588483 SSFA2P28290 1259 aa14.05□□□□□ -0.16
TPM4-209ENST00000588483 ATP6V1AP38606 617 aa14.05□□□□□ -0.16
TPM4-209ENST00000588483 DDX10Q13206 875 aaKnown RBP14.05□□□□□ -0.16
TPM4-209ENST00000588483 COL23A1Q86Y22 540 aaPredicted RBP14.05□□□□□ -0.16
TPM4-209ENST00000588483 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
TPM4-209ENST00000588483 TJP1Q07157 1748 aa14.04□□□□□ -0.16
TPM4-209ENST00000588483 PRKAR2BP31323 418 aa14.04□□□□□ -0.16
TPM4-209ENST00000588483 PHACTR3Q96KR7 559 aa14.04□□□□□ -0.16
TPM4-209ENST00000588483 AK7Q96M32 723 aa14.04□□□□□ -0.16
TPM4-209ENST00000588483 PPP1R1BQ9UD71 204 aaPredicted RBP14.04□□□□□ -0.16
TPM4-209ENST00000588483 CNTNAP4Q9C0A0 1308 aa14.04□□□□□ -0.16
TPM4-209ENST00000588483 UTRNP46939 3433 aa14.04□□□□□ -0.16
TPM4-209ENST00000588483 KCPQ6ZWJ8 1503 aa14.04□□□□□ -0.16
TPM4-209ENST00000588483 MYH14Q7Z406 1995 aaKnown RBP14.03□□□□□ -0.16
TPM4-209ENST00000588483 GNAT3A8MTJ3 354 aa14.03□□□□□ -0.16
TPM4-209ENST00000588483 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
TPM4-209ENST00000588483 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.16
TPM4-209ENST00000588483 RC3H1Q5TC82 1133 aaKnown RBP14.03□□□□□ -0.16
TPM4-209ENST00000588483 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
TPM4-209ENST00000588483 MYBBP1AQ9BQG0 1328 aaKnown RBP14.01□□□□□ -0.17
TPM4-209ENST00000588483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.01□□□□□ -0.17
TPM4-209ENST00000588483 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
TPM4-209ENST00000588483 ARXQ96QS3 562 aa14.01□□□□□ -0.17
TPM4-209ENST00000588483 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
TPM4-209ENST00000588483 ADRA2BP18089 450 aa14□□□□□ -0.17
TPM4-209ENST00000588483 POLD1P28340 1107 aa14□□□□□ -0.17
TPM4-209ENST00000588483 VSIG10Q8N0Z9 540 aa14□□□□□ -0.17
TPM4-209ENST00000588483 GOLGB1Q14789 3259 aaKnown RBP13.99□□□□□ -0.17
TPM4-209ENST00000588483 GNPATO15228 680 aa13.99□□□□□ -0.17
TPM4-209ENST00000588483 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
TPM4-209ENST00000588483 PTCD1O75127 700 aaKnown RBP13.99□□□□□ -0.17
TPM4-209ENST00000588483 PLEKHF1Q96S99 279 aa13.99□□□□□ -0.17
TPM4-209ENST00000588483 FHDC1Q9C0D6 1143 aaPredicted RBP13.99□□□□□ -0.17
TPM4-209ENST00000588483 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
TPM4-209ENST00000588483 RPS6KA4O75676 772 aa13.98□□□□□ -0.17
TPM4-209ENST00000588483 SYT17Q9BSW7 474 aa13.98□□□□□ -0.17
TPM4-209ENST00000588483 DLG5Q8TDM6 1919 aa13.98□□□□□ -0.17
TPM4-209ENST00000588483 TEFQ10587 303 aa13.97□□□□□ -0.17
TPM4-209ENST00000588483 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
TPM4-209ENST00000588483 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
TPM4-209ENST00000588483 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
TPM4-209ENST00000588483 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
TPM4-209ENST00000588483 MSH5O43196 834 aa13.96□□□□□ -0.17
TPM4-209ENST00000588483 PHF14O94880 888 aa13.96□□□□□ -0.17
TPM4-209ENST00000588483 CRKLP46109 303 aaKnown RBP13.96□□□□□ -0.17
TPM4-209ENST00000588483 ZNF790Q6PG37 636 aa13.96□□□□□ -0.17
TPM4-209ENST00000588483 TRAPPC3LQ5T215 181 aa13.95□□□□□ -0.18
TPM4-209ENST00000588483 DNAJC10Q8IXB1 793 aa13.95□□□□□ -0.18
TPM4-209ENST00000588483 CYP19A1P11511 503 aaPredicted RBP13.94□□□□□ -0.18
TPM4-209ENST00000588483 INTS5Q6P9B9 1019 aaKnown RBP13.94□□□□□ -0.18
TPM4-209ENST00000588483 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
TPM4-209ENST00000588483 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
TPM4-209ENST00000588483 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
TPM4-209ENST00000588483 ARHGEF1Q92888 912 aaKnown RBP13.94□□□□□ -0.18
TPM4-209ENST00000588483 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
TPM4-209ENST00000588483 NEFMP07197 916 aa13.93□□□□□ -0.18
TPM4-209ENST00000588483 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
TPM4-209ENST00000588483 MSL1Q68DK7 614 aa13.93□□□□□ -0.18
TPM4-209ENST00000588483 ZNF496Q96IT1 587 aaPredicted RBP13.93□□□□□ -0.18
TPM4-209ENST00000588483 CCDC87Q9NVE4 849 aa13.93□□□□□ -0.18
TPM4-209ENST00000588483 SOS1Q07889 1333 aaPredicted RBP13.92□□□□□ -0.18
TPM4-209ENST00000588483 MCM10Q7L590 875 aa13.92□□□□□ -0.18
TPM4-209ENST00000588483 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
TPM4-209ENST00000588483 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
TPM4-209ENST00000588483 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
TPM4-209ENST00000588483 USP42Q9H9J4 1324 aaKnown RBP13.91□□□□□ -0.18
TPM4-209ENST00000588483 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
TPM4-209ENST00000588483 GYS1P13807 737 aa13.91□□□□□ -0.18
TPM4-209ENST00000588483 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
TPM4-209ENST00000588483 FMNL2Q96PY5 1086 aa13.91□□□□□ -0.18
TPM4-209ENST00000588483 KDM3BQ7LBC6 1761 aa13.91□□□□□ -0.18
TPM4-209ENST00000588483 MAPK8IP3Q9UPT6 1336 aa13.9□□□□□ -0.18
TPM4-209ENST00000588483 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
TPM4-209ENST00000588483 RFC4P35249 363 aa13.9□□□□□ -0.18
TPM4-209ENST00000588483 ZBTB1Q9Y2K1 713 aa13.9□□□□□ -0.18
TPM4-209ENST00000588483 COL15A1P39059 1388 aa13.89□□□□□ -0.19
TPM4-209ENST00000588483 STARD3NLO95772 234 aa13.89□□□□□ -0.19
TPM4-209ENST00000588483 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms