RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 CHMP4AQ9BY43 222 aa20.97■□□□□ 0.95
NFIX-210ENST00000588228 RWDD1Q9H446 243 aaPredicted RBP20.97■□□□□ 0.95
NFIX-210ENST00000588228 RGS12O14924 1447 aa20.97■□□□□ 0.95
NFIX-210ENST00000588228 KDM6AO15550 1401 aaPredicted RBP20.96■□□□□ 0.95
NFIX-210ENST00000588228 HSP90AB1P08238 724 aaKnown RBP20.96■□□□□ 0.95
NFIX-210ENST00000588228 EVA1CP58658 441 aa20.96■□□□□ 0.95
NFIX-210ENST00000588228 ZBTB7BO15156 539 aaPredicted RBP20.95■□□□□ 0.94
NFIX-210ENST00000588228 INTS3Q68E01 1043 aaKnown RBP20.95■□□□□ 0.94
NFIX-210ENST00000588228 STRN4Q9NRL3 753 aa20.95■□□□□ 0.94
NFIX-210ENST00000588228 PARP4Q9UKK3 1724 aaKnown RBP20.94■□□□□ 0.94
NFIX-210ENST00000588228 CYP27B1O15528 508 aa20.94■□□□□ 0.94
NFIX-210ENST00000588228 LARP1Q6PKG0 1096 aaKnown RBP20.94■□□□□ 0.94
NFIX-210ENST00000588228 DCAF5Q96JK2 942 aa20.94■□□□□ 0.94
NFIX-210ENST00000588228 KCNQ3O43525 872 aa20.93■□□□□ 0.94
NFIX-210ENST00000588228 HDGFL1Q5TGJ6 251 aa20.93■□□□□ 0.94
NFIX-210ENST00000588228 SLC52A2Q9HAB3 445 aa20.93■□□□□ 0.94
NFIX-210ENST00000588228 COL16A1Q07092 1604 aaPredicted RBP20.93■□□□□ 0.94
NFIX-210ENST00000588228 IL2RBP14784 551 aa20.93■□□□□ 0.94
NFIX-210ENST00000588228 HDAC1Q13547 482 aaPredicted RBP20.93■□□□□ 0.94
NFIX-210ENST00000588228 SIPA1L3O60292 1781 aaPredicted RBP20.93■□□□□ 0.94
NFIX-210ENST00000588228 COL14A1Q05707 1796 aaKnown RBP20.93■□□□□ 0.94
NFIX-210ENST00000588228 PCDH11XQ9BZA7 1347 aa20.92■□□□□ 0.94
NFIX-210ENST00000588228 PCDH11YQ9BZA8 1340 aa20.92■□□□□ 0.94
NFIX-210ENST00000588228 ZCRB1Q8TBF4 217 aaKnown RBP20.92■□□□□ 0.94
NFIX-210ENST00000588228 BTG4Q9NY30 223 aa20.92■□□□□ 0.94
NFIX-210ENST00000588228 MRC1P22897 1456 aa20.92■□□□□ 0.94
NFIX-210ENST00000588228 PHLPP1O60346 1717 aa20.91■□□□□ 0.94
NFIX-210ENST00000588228 G2E3Q7L622 706 aa20.91■□□□□ 0.94
NFIX-210ENST00000588228 HEG1Q9ULI3 1381 aa20.91■□□□□ 0.94
NFIX-210ENST00000588228 SCN11AQ9UI33 1791 aa20.9■□□□□ 0.94
NFIX-210ENST00000588228 RBM19Q9Y4C8 960 aaKnown RBP20.9■□□□□ 0.94
NFIX-210ENST00000588228 VIRMAQ69YN4 1812 aaKnown RBP20.9■□□□□ 0.94
NFIX-210ENST00000588228 FLIIQ13045 1269 aa20.89■□□□□ 0.94
NFIX-210ENST00000588228 NECTIN2Q92692 538 aa20.89■□□□□ 0.93
NFIX-210ENST00000588228 SKAP1Q86WV1 359 aa20.88■□□□□ 0.93
NFIX-210ENST00000588228 GIGYF1O75420 1035 aaPredicted RBP20.87■□□□□ 0.93
NFIX-210ENST00000588228 PIP4K2BP78356 416 aa20.87■□□□□ 0.93
NFIX-210ENST00000588228 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
NFIX-210ENST00000588228 EIF2S2P20042 333 aaKnown RBP20.86■□□□□ 0.93
NFIX-210ENST00000588228 CCT4P50991 539 aaKnown RBP20.86■□□□□ 0.93
NFIX-210ENST00000588228 ZNF790Q6PG37 636 aa20.86■□□□□ 0.93
NFIX-210ENST00000588228 FKBP5Q13451 457 aaPredicted RBP20.86■□□□□ 0.93
NFIX-210ENST00000588228 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
NFIX-210ENST00000588228 UBAP1LF5GYI3 381 aa20.84■□□□□ 0.93
NFIX-210ENST00000588228 CABP4P57796 275 aa20.84■□□□□ 0.93
NFIX-210ENST00000588228 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
NFIX-210ENST00000588228 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.93
NFIX-210ENST00000588228 F6X3S4 739 aa20.83■□□□□ 0.92
NFIX-210ENST00000588228 SMC5Q8IY18 1101 aa20.83■□□□□ 0.92
NFIX-210ENST00000588228 DBF4Q9UBU7 674 aaPredicted RBP20.83■□□□□ 0.92
NFIX-210ENST00000588228 PXDNLA1KZ92 1463 aa20.83■□□□□ 0.92
NFIX-210ENST00000588228 CACNA1FO60840 1977 aa20.82■□□□□ 0.92
NFIX-210ENST00000588228 ERVV-2B6SEH9 535 aa20.82■□□□□ 0.92
NFIX-210ENST00000588228 SLC39A6Q13433 755 aa20.82■□□□□ 0.92
NFIX-210ENST00000588228 SLC4A10Q6U841 1118 aa20.82■□□□□ 0.92
NFIX-210ENST00000588228 C1orf115Q9H7X2 142 aa20.82■□□□□ 0.92
NFIX-210ENST00000588228 USP35Q9P2H5 1018 aa20.82■□□□□ 0.92
NFIX-210ENST00000588228 PDZRN3Q9UPQ7 1066 aa20.82■□□□□ 0.92
NFIX-210ENST00000588228 DISP2A7MBM2 1401 aa20.81■□□□□ 0.92
NFIX-210ENST00000588228 RGS3P49796 1198 aa20.81■□□□□ 0.92
NFIX-210ENST00000588228 TTC5Q8N0Z6 440 aa20.81■□□□□ 0.92
NFIX-210ENST00000588228 PHAXQ9H814 394 aaKnown RBP20.81■□□□□ 0.92
NFIX-210ENST00000588228 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
NFIX-210ENST00000588228 SHANK3Q9BYB0 1731 aa20.79■□□□□ 0.92
NFIX-210ENST00000588228 ADAMTS2O95450 1211 aa20.79■□□□□ 0.92
NFIX-210ENST00000588228 PDE4AP27815 886 aa20.79■□□□□ 0.92
NFIX-210ENST00000588228 PRAMEF22A3QJZ6 481 aa20.78■□□□□ 0.92
NFIX-210ENST00000588228 ZNF496Q96IT1 587 aaPredicted RBP20.78■□□□□ 0.92
NFIX-210ENST00000588228 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
NFIX-210ENST00000588228 MEIS3Q99687 375 aa20.78■□□□□ 0.92
NFIX-210ENST00000588228 SIRT2Q8IXJ6 389 aa20.77■□□□□ 0.92
NFIX-210ENST00000588228 GCC1Q96CN9 775 aa20.77■□□□□ 0.92
NFIX-210ENST00000588228 BACH2Q9BYV9 841 aa20.77■□□□□ 0.92
NFIX-210ENST00000588228 PLCH1Q4KWH8 1693 aa20.77■□□□□ 0.92
NFIX-210ENST00000588228 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
NFIX-210ENST00000588228 SNRPA1P09661 255 aaKnown RBP20.77■□□□□ 0.91
NFIX-210ENST00000588228 RPAP2Q8IXW5 612 aaPredicted RBP20.77■□□□□ 0.91
NFIX-210ENST00000588228 HYPKQ9NX55 129 aa20.77■□□□□ 0.91
NFIX-210ENST00000588228 DDX21Q9NR30 783 aaKnown RBP eCLIP20.76■□□□□ 0.91
NFIX-210ENST00000588228 ANKRD44Q8N8A2 993 aa20.75■□□□□ 0.91
NFIX-210ENST00000588228 NUTM2BA6NNL0 878 aaPredicted RBP20.74■□□□□ 0.91
NFIX-210ENST00000588228 NUTM2EB1AL46 878 aaPredicted RBP20.74■□□□□ 0.91
NFIX-210ENST00000588228 GNAI3P08754 354 aa20.74■□□□□ 0.91
NFIX-210ENST00000588228 NUTM2AQ8IVF1 878 aaPredicted RBP20.74■□□□□ 0.91
NFIX-210ENST00000588228 THRAP3Q9Y2W1 955 aaKnown RBP20.74■□□□□ 0.91
NFIX-210ENST00000588228 N4BP2Q86UW6 1770 aaPredicted RBP20.74■□□□□ 0.91
NFIX-210ENST00000588228 NRAPQ86VF7 1730 aa20.74■□□□□ 0.91
NFIX-210ENST00000588228 ANXA1P04083 346 aa20.73■□□□□ 0.91
NFIX-210ENST00000588228 NUCB1Q02818 461 aa20.73■□□□□ 0.91
NFIX-210ENST00000588228 CEP85Q6P2H3 762 aa20.73■□□□□ 0.91
NFIX-210ENST00000588228 DNAAF4Q8WXU2 420 aa20.73■□□□□ 0.91
NFIX-210ENST00000588228 CDCA7Q9BWT1 371 aaPredicted RBP20.73■□□□□ 0.91
NFIX-210ENST00000588228 JCADQ9P266 1359 aa20.73■□□□□ 0.91
NFIX-210ENST00000588228 PROSER3Q2NL68 480 aa20.73■□□□□ 0.91
NFIX-210ENST00000588228 FAM161AQ3B820 660 aa20.73■□□□□ 0.91
NFIX-210ENST00000588228 SPATA31A1Q5TZJ5 1347 aa20.72■□□□□ 0.91
NFIX-210ENST00000588228 SLIT2O94813 1529 aa20.72■□□□□ 0.91
NFIX-210ENST00000588228 PI4KAP2A4QPH2 592 aa20.72■□□□□ 0.91
NFIX-210ENST00000588228 PDIA6Q15084 440 aa20.72■□□□□ 0.91
NFIX-210ENST00000588228 PI4KAP1Q8N8J0 262 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms