RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 AMIGO3Q86WK7 504 aa18.23■□□□□ 0.51
PKN1-211ENST00000588200 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
PKN1-211ENST00000588200 GRIN3BO60391 1043 aa18.22■□□□□ 0.51
PKN1-211ENST00000588200 IL13P35225 146 aa18.22■□□□□ 0.51
PKN1-211ENST00000588200 ITPK1Q13572 414 aa18.22■□□□□ 0.51
PKN1-211ENST00000588200 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
PKN1-211ENST00000588200 KIF7Q2M1P5 1343 aa18.22■□□□□ 0.51
PKN1-211ENST00000588200 ATP6V1AP38606 617 aa18.21■□□□□ 0.51
PKN1-211ENST00000588200 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
PKN1-211ENST00000588200 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
PKN1-211ENST00000588200 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
PKN1-211ENST00000588200 NPC1L1Q9UHC9 1359 aa18.19■□□□□ 0.5
PKN1-211ENST00000588200 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
PKN1-211ENST00000588200 ZNF530Q6P9A1 599 aaPredicted RBP18.19■□□□□ 0.5
PKN1-211ENST00000588200 SLC4A9Q96Q91 983 aa18.19■□□□□ 0.5
PKN1-211ENST00000588200 ADRA2BP18089 450 aa18.18■□□□□ 0.5
PKN1-211ENST00000588200 AEBP1Q8IUX7 1158 aa18.18■□□□□ 0.5
PKN1-211ENST00000588200 KLHL34Q8N239 644 aa18.18■□□□□ 0.5
PKN1-211ENST00000588200 SCN11AQ9UI33 1791 aa18.17■□□□□ 0.5
PKN1-211ENST00000588200 YBX3P16989 372 aaKnown RBP eCLIP18.17■□□□□ 0.5
PKN1-211ENST00000588200 MTHFSP49914 203 aa18.17■□□□□ 0.5
PKN1-211ENST00000588200 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
PKN1-211ENST00000588200 CNTNAP4Q9C0A0 1308 aa18.17■□□□□ 0.5
PKN1-211ENST00000588200 GNPATO15228 680 aa18.16■□□□□ 0.5
PKN1-211ENST00000588200 CABP4P57796 275 aa18.16■□□□□ 0.5
PKN1-211ENST00000588200 C1orf141Q5JVX7 400 aa18.16■□□□□ 0.5
PKN1-211ENST00000588200 KIF13BQ9NQT8 1826 aa18.15■□□□□ 0.5
PKN1-211ENST00000588200 RTCBQ9Y3I0 505 aaKnown RBP18.15■□□□□ 0.5
PKN1-211ENST00000588200 MYH14Q7Z406 1995 aaKnown RBP18.15■□□□□ 0.5
PKN1-211ENST00000588200 RPS6KA4O75676 772 aa18.14■□□□□ 0.49
PKN1-211ENST00000588200 PHF14O94880 888 aa18.14■□□□□ 0.49
PKN1-211ENST00000588200 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.49
PKN1-211ENST00000588200 TRAPPC3LQ5T215 181 aa18.14■□□□□ 0.49
PKN1-211ENST00000588200 NLGN1Q8N2Q7 840 aa18.14■□□□□ 0.49
PKN1-211ENST00000588200 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
PKN1-211ENST00000588200 NFATC2IPQ8NCF5 419 aa18.13■□□□□ 0.49
PKN1-211ENST00000588200 SMIM5Q71RC9 77 aa18.12■□□□□ 0.49
PKN1-211ENST00000588200 PELP1Q8IZL8 1130 aaKnown RBP18.11■□□□□ 0.49
PKN1-211ENST00000588200 ARHGEF1Q92888 912 aaKnown RBP18.11■□□□□ 0.49
PKN1-211ENST00000588200 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
PKN1-211ENST00000588200 MRC1P22897 1456 aa18.11■□□□□ 0.49
PKN1-211ENST00000588200 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
PKN1-211ENST00000588200 TGFB2P61812 414 aa18.09■□□□□ 0.49
PKN1-211ENST00000588200 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
PKN1-211ENST00000588200 DIAPH1O60610 1272 aaKnown RBP18.08■□□□□ 0.48
PKN1-211ENST00000588200 MMP10P09238 476 aa18.08■□□□□ 0.48
PKN1-211ENST00000588200 GYS1P13807 737 aa18.08■□□□□ 0.48
PKN1-211ENST00000588200 C1QTNF8P60827 252 aa18.08■□□□□ 0.48
PKN1-211ENST00000588200 C4AP0C0L4 1744 aa18.08■□□□□ 0.48
PKN1-211ENST00000588200 TJP1Q07157 1748 aa18.08■□□□□ 0.48
PKN1-211ENST00000588200 KIAA1551Q9HCM1 1747 aa18.08■□□□□ 0.48
PKN1-211ENST00000588200 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
PKN1-211ENST00000588200 ADCY9O60503 1353 aa18.06■□□□□ 0.48
PKN1-211ENST00000588200 RFC4P35249 363 aa18.06■□□□□ 0.48
PKN1-211ENST00000588200 CEP350Q5VT06 3117 aa18.06■□□□□ 0.48
PKN1-211ENST00000588200 C10orf71Q711Q0 1435 aa18.06■□□□□ 0.48
PKN1-211ENST00000588200 RNMTO43148 476 aaKnown RBP18.05■□□□□ 0.48
PKN1-211ENST00000588200 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
PKN1-211ENST00000588200 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
PKN1-211ENST00000588200 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
PKN1-211ENST00000588200 LGR6Q9HBX8 967 aa18.05■□□□□ 0.48
PKN1-211ENST00000588200 PXDNLA1KZ92 1463 aa18.04■□□□□ 0.48
PKN1-211ENST00000588200 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
PKN1-211ENST00000588200 CC2D1BQ5T0F9 858 aaKnown RBP18.04■□□□□ 0.48
PKN1-211ENST00000588200 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
PKN1-211ENST00000588200 USP42Q9H9J4 1324 aaKnown RBP18.03■□□□□ 0.48
PKN1-211ENST00000588200 HMOX1P09601 288 aa18.03■□□□□ 0.48
PKN1-211ENST00000588200 BRCA1P38398 1863 aaKnown RBP18.03■□□□□ 0.48
PKN1-211ENST00000588200 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.48
PKN1-211ENST00000588200 GIGYF1O75420 1035 aaPredicted RBP18.02■□□□□ 0.48
PKN1-211ENST00000588200 CCDC87Q9NVE4 849 aa18.02■□□□□ 0.48
PKN1-211ENST00000588200 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.47
PKN1-211ENST00000588200 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
PKN1-211ENST00000588200 ATP10DQ9P241 1426 aa18■□□□□ 0.47
PKN1-211ENST00000588200 CYP19A1P11511 503 aaPredicted RBP18■□□□□ 0.47
PKN1-211ENST00000588200 N4BP2Q86UW6 1770 aaPredicted RBP17.99■□□□□ 0.47
PKN1-211ENST00000588200 TM4SF1P30408 202 aa17.99■□□□□ 0.47
PKN1-211ENST00000588200 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
PKN1-211ENST00000588200 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
PKN1-211ENST00000588200 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
PKN1-211ENST00000588200 SIPA1L3O60292 1781 aaPredicted RBP17.98■□□□□ 0.47
PKN1-211ENST00000588200 ARFGEF1Q9Y6D6 1849 aa17.98■□□□□ 0.47
PKN1-211ENST00000588200 KCNA3P22001 575 aa17.97■□□□□ 0.47
PKN1-211ENST00000588200 FKBP8Q14318 412 aa17.97■□□□□ 0.47
PKN1-211ENST00000588200 CEMIPQ8WUJ3 1361 aa17.96■□□□□ 0.47
PKN1-211ENST00000588200 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
PKN1-211ENST00000588200 NARFQ9UHQ1 456 aa17.96■□□□□ 0.47
PKN1-211ENST00000588200 NRXN2Q9P2S2 1712 aa17.95■□□□□ 0.46
PKN1-211ENST00000588200 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
PKN1-211ENST00000588200 SLC39A6Q13433 755 aa17.95■□□□□ 0.46
PKN1-211ENST00000588200 IL17REQ8NFR9 667 aa17.95■□□□□ 0.46
PKN1-211ENST00000588200 SRP68Q9UHB9 627 aaKnown RBP17.95■□□□□ 0.46
PKN1-211ENST00000588200 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
PKN1-211ENST00000588200 ZPR1O75312 459 aa17.94■□□□□ 0.46
PKN1-211ENST00000588200 DPEP1P16444 411 aa17.94■□□□□ 0.46
PKN1-211ENST00000588200 DDR1Q08345 913 aa17.94■□□□□ 0.46
PKN1-211ENST00000588200 TEX13AQ9BXU3 409 aaPredicted RBP17.94■□□□□ 0.46
PKN1-211ENST00000588200 GPBP1L1Q9HC44 474 aaPredicted RBP17.94■□□□□ 0.46
PKN1-211ENST00000588200 U2SURPO15042 1029 aaKnown RBP17.93■□□□□ 0.46
PKN1-211ENST00000588200 CFAP53Q96M91 514 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms