RNA–Protein interactions for RNA: ENST00000588177.1

SOX9-AS1-215, SOX9 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene SOX9-AS1, Length 465 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-215ENST00000588177 NHSQ6T4R5 1651 aa12.54□□□□□ -0.4
SOX9-AS1-215ENST00000588177 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
SOX9-AS1-215ENST00000588177 CABP4P57796 275 aa12.53□□□□□ -0.4
SOX9-AS1-215ENST00000588177 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
SOX9-AS1-215ENST00000588177 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
SOX9-AS1-215ENST00000588177 SLC52A2Q9HAB3 445 aa12.53□□□□□ -0.4
SOX9-AS1-215ENST00000588177 BABAM1Q9NWV8 329 aa12.53□□□□□ -0.4
SOX9-AS1-215ENST00000588177 LAMB4A4D0S4 1761 aa12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 RXRBP28702 533 aa12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 TAF7Q15545 349 aaPredicted RBP12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
SOX9-AS1-215ENST00000588177 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
SOX9-AS1-215ENST00000588177 TRMT2AQ8IZ69 625 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-215ENST00000588177 TMOD3Q9NYL9 352 aa12.51□□□□□ -0.41
SOX9-AS1-215ENST00000588177 BTAF1O14981 1849 aa12.51□□□□□ -0.41
SOX9-AS1-215ENST00000588177 CHL1O00533 1208 aa12.5□□□□□ -0.41
SOX9-AS1-215ENST00000588177 ONECUT3O60422 494 aaPredicted RBP12.5□□□□□ -0.41
SOX9-AS1-215ENST00000588177 TTC5Q8N0Z6 440 aa12.5□□□□□ -0.41
SOX9-AS1-215ENST00000588177 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
SOX9-AS1-215ENST00000588177 C5P01031 1676 aa12.5□□□□□ -0.41
SOX9-AS1-215ENST00000588177 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
SOX9-AS1-215ENST00000588177 RGS12O14924 1447 aa12.49□□□□□ -0.41
SOX9-AS1-215ENST00000588177 NFATC2IPQ8NCF5 419 aa12.49□□□□□ -0.41
SOX9-AS1-215ENST00000588177 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
SOX9-AS1-215ENST00000588177 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
SOX9-AS1-215ENST00000588177 EXOSC9Q06265 439 aaKnown RBP12.48□□□□□ -0.41
SOX9-AS1-215ENST00000588177 KRT27Q7Z3Y8 459 aa12.48□□□□□ -0.41
SOX9-AS1-215ENST00000588177 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
SOX9-AS1-215ENST00000588177 BCL9O00512 1426 aa12.47□□□□□ -0.41
SOX9-AS1-215ENST00000588177 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
SOX9-AS1-215ENST00000588177 RGS17Q9UGC6 210 aaPredicted RBP12.47□□□□□ -0.41
SOX9-AS1-215ENST00000588177 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
SOX9-AS1-215ENST00000588177 POTEAQ6S8J7 498 aa12.46□□□□□ -0.41
SOX9-AS1-215ENST00000588177 RCAN3Q9UKA8 241 aa12.46□□□□□ -0.41
SOX9-AS1-215ENST00000588177 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.42
SOX9-AS1-215ENST00000588177 SOS1Q07889 1333 aaPredicted RBP12.45□□□□□ -0.42
SOX9-AS1-215ENST00000588177 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
SOX9-AS1-215ENST00000588177 ZNF790Q6PG37 636 aa12.45□□□□□ -0.42
SOX9-AS1-215ENST00000588177 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
SOX9-AS1-215ENST00000588177 FAM196AQ6ZSG2 479 aa12.44□□□□□ -0.42
SOX9-AS1-215ENST00000588177 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
SOX9-AS1-215ENST00000588177 FMNL2Q96PY5 1086 aa12.44□□□□□ -0.42
SOX9-AS1-215ENST00000588177 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
SOX9-AS1-215ENST00000588177 LY75O60449 1722 aa12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 TJP1Q07157 1748 aa12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 ZNF831Q5JPB2 1677 aa12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 HOXB7P09629 217 aa12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 PIGBQ92521 554 aa12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 CICQ96RK0 1608 aaPredicted RBP12.43□□□□□ -0.42
SOX9-AS1-215ENST00000588177 KCNQ3O43525 872 aa12.42□□□□□ -0.42
SOX9-AS1-215ENST00000588177 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
SOX9-AS1-215ENST00000588177 CANXP27824 592 aaKnown RBP12.41□□□□□ -0.42
SOX9-AS1-215ENST00000588177 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
SOX9-AS1-215ENST00000588177 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
SOX9-AS1-215ENST00000588177 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
SOX9-AS1-215ENST00000588177 SMC4Q9NTJ3 1288 aa12.41□□□□□ -0.42
SOX9-AS1-215ENST00000588177 PALLDQ8WX93 1383 aa12.41□□□□□ -0.42
SOX9-AS1-215ENST00000588177 HEG1Q9ULI3 1381 aa12.41□□□□□ -0.42
SOX9-AS1-215ENST00000588177 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 VAMP4O75379 141 aa12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 HDGFL1Q5TGJ6 251 aa12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 ZNF496Q96IT1 587 aaPredicted RBP12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 ASAP1Q9ULH1 1129 aa12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 RGPD4Q7Z3J3 1758 aa12.4□□□□□ -0.42
SOX9-AS1-215ENST00000588177 TAF1LQ8IZX4 1826 aa12.39□□□□□ -0.43
SOX9-AS1-215ENST00000588177 KCNQ2O43526 872 aa12.39□□□□□ -0.43
SOX9-AS1-215ENST00000588177 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
SOX9-AS1-215ENST00000588177 GIGYF1O75420 1035 aaPredicted RBP12.39□□□□□ -0.43
SOX9-AS1-215ENST00000588177 RARSP54136 660 aaKnown RBP12.39□□□□□ -0.43
SOX9-AS1-215ENST00000588177 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
SOX9-AS1-215ENST00000588177 KIF16BQ96L93 1317 aa12.38□□□□□ -0.43
SOX9-AS1-215ENST00000588177 NEFLP07196 543 aa12.38□□□□□ -0.43
SOX9-AS1-215ENST00000588177 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
SOX9-AS1-215ENST00000588177 CACNB1Q02641 598 aaPredicted RBP12.38□□□□□ -0.43
SOX9-AS1-215ENST00000588177 VSIG10Q8N0Z9 540 aa12.38□□□□□ -0.43
SOX9-AS1-215ENST00000588177 BCL2L13Q9BXK5 485 aa12.38□□□□□ -0.43
SOX9-AS1-215ENST00000588177 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
SOX9-AS1-215ENST00000588177 SUPT16HQ9Y5B9 1047 aaKnown RBP12.38□□□□□ -0.43
SOX9-AS1-215ENST00000588177 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
SOX9-AS1-215ENST00000588177 NECTIN2Q92692 538 aa12.37□□□□□ -0.43
SOX9-AS1-215ENST00000588177 TEX13AQ9BXU3 409 aaPredicted RBP12.37□□□□□ -0.43
SOX9-AS1-215ENST00000588177 N4BP2Q86UW6 1770 aaPredicted RBP12.36□□□□□ -0.43
SOX9-AS1-215ENST00000588177 RREB1Q92766 1687 aa12.36□□□□□ -0.43
SOX9-AS1-215ENST00000588177 BCAR3O75815 825 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms